BLASTX nr result

ID: Coptis21_contig00013059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013059
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285502.1| PREDICTED: ubiquinone biosynthesis protein C...    59   4e-07
ref|XP_002314999.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|NP_001149451.1| ubiquinone biosynthesis protein COQ4 [Zea ma...    55   5e-06
ref|XP_002447311.1| hypothetical protein SORBIDRAFT_06g032660 [S...    55   6e-06
ref|XP_003580809.1| PREDICTED: ubiquinone biosynthesis protein C...    55   8e-06

>ref|XP_002285502.1| PREDICTED: ubiquinone biosynthesis protein COQ4 homolog,
           mitochondrial [Vitis vinifera]
          Length = 227

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/31 (74%), Positives = 28/31 (90%)
 Frame = +2

Query: 2   LISVYYECHFHEDLEDVRRRWGIVPAPVPPK 94
           L+ +YYE HFHEDL+DVRR+WGIVPAP PP+
Sbjct: 196 LMCIYYEQHFHEDLDDVRRKWGIVPAPPPPR 226


>ref|XP_002314999.1| predicted protein [Populus trichocarpa] gi|222864039|gb|EEF01170.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/33 (72%), Positives = 26/33 (78%)
 Frame = +2

Query: 2   LISVYYECHFHEDLEDVRRRWGIVPAPVPPKPD 100
           L+ VYYE HFHEDLEDVRR+WGI PAP  P  D
Sbjct: 195 LMCVYYEKHFHEDLEDVRRKWGITPAPAAPNQD 227


>ref|NP_001149451.1| ubiquinone biosynthesis protein COQ4 [Zea mays]
           gi|195627326|gb|ACG35493.1| ubiquinone biosynthesis
           protein COQ4 [Zea mays]
          Length = 227

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +2

Query: 2   LISVYYECHFHEDLEDVRRRWGIVPAPVPPK 94
           L+SVYYE HFHEDLE+VRR WGI+P P P K
Sbjct: 194 LMSVYYEKHFHEDLEEVRRNWGILPCPSPKK 224


>ref|XP_002447311.1| hypothetical protein SORBIDRAFT_06g032660 [Sorghum bicolor]
           gi|241938494|gb|EES11639.1| hypothetical protein
           SORBIDRAFT_06g032660 [Sorghum bicolor]
          Length = 175

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +2

Query: 2   LISVYYECHFHEDLEDVRRRWGIVPAPVPPK 94
           L+SVYYE HFHEDLE+VRR WGI+P P P K
Sbjct: 142 LMSVYYEKHFHEDLEEVRRNWGILPCPNPQK 172


>ref|XP_003580809.1| PREDICTED: ubiquinone biosynthesis protein COQ4 homolog,
           mitochondrial-like [Brachypodium distachyon]
          Length = 227

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = +2

Query: 2   LISVYYECHFHEDLEDVRRRWGIVPAPVP 88
           L+SVYYE HFHEDLE+VRR WGIVP P P
Sbjct: 194 LMSVYYEKHFHEDLEEVRRNWGIVPCPDP 222


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