BLASTX nr result
ID: Coptis21_contig00013059
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00013059 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285502.1| PREDICTED: ubiquinone biosynthesis protein C... 59 4e-07 ref|XP_002314999.1| predicted protein [Populus trichocarpa] gi|2... 58 9e-07 ref|NP_001149451.1| ubiquinone biosynthesis protein COQ4 [Zea ma... 55 5e-06 ref|XP_002447311.1| hypothetical protein SORBIDRAFT_06g032660 [S... 55 6e-06 ref|XP_003580809.1| PREDICTED: ubiquinone biosynthesis protein C... 55 8e-06 >ref|XP_002285502.1| PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Vitis vinifera] Length = 227 Score = 58.9 bits (141), Expect = 4e-07 Identities = 23/31 (74%), Positives = 28/31 (90%) Frame = +2 Query: 2 LISVYYECHFHEDLEDVRRRWGIVPAPVPPK 94 L+ +YYE HFHEDL+DVRR+WGIVPAP PP+ Sbjct: 196 LMCIYYEQHFHEDLDDVRRKWGIVPAPPPPR 226 >ref|XP_002314999.1| predicted protein [Populus trichocarpa] gi|222864039|gb|EEF01170.1| predicted protein [Populus trichocarpa] Length = 229 Score = 57.8 bits (138), Expect = 9e-07 Identities = 24/33 (72%), Positives = 26/33 (78%) Frame = +2 Query: 2 LISVYYECHFHEDLEDVRRRWGIVPAPVPPKPD 100 L+ VYYE HFHEDLEDVRR+WGI PAP P D Sbjct: 195 LMCVYYEKHFHEDLEDVRRKWGITPAPAAPNQD 227 >ref|NP_001149451.1| ubiquinone biosynthesis protein COQ4 [Zea mays] gi|195627326|gb|ACG35493.1| ubiquinone biosynthesis protein COQ4 [Zea mays] Length = 227 Score = 55.5 bits (132), Expect = 5e-06 Identities = 23/31 (74%), Positives = 26/31 (83%) Frame = +2 Query: 2 LISVYYECHFHEDLEDVRRRWGIVPAPVPPK 94 L+SVYYE HFHEDLE+VRR WGI+P P P K Sbjct: 194 LMSVYYEKHFHEDLEEVRRNWGILPCPSPKK 224 >ref|XP_002447311.1| hypothetical protein SORBIDRAFT_06g032660 [Sorghum bicolor] gi|241938494|gb|EES11639.1| hypothetical protein SORBIDRAFT_06g032660 [Sorghum bicolor] Length = 175 Score = 55.1 bits (131), Expect = 6e-06 Identities = 23/31 (74%), Positives = 26/31 (83%) Frame = +2 Query: 2 LISVYYECHFHEDLEDVRRRWGIVPAPVPPK 94 L+SVYYE HFHEDLE+VRR WGI+P P P K Sbjct: 142 LMSVYYEKHFHEDLEEVRRNWGILPCPNPQK 172 >ref|XP_003580809.1| PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial-like [Brachypodium distachyon] Length = 227 Score = 54.7 bits (130), Expect = 8e-06 Identities = 23/29 (79%), Positives = 25/29 (86%) Frame = +2 Query: 2 LISVYYECHFHEDLEDVRRRWGIVPAPVP 88 L+SVYYE HFHEDLE+VRR WGIVP P P Sbjct: 194 LMSVYYEKHFHEDLEEVRRNWGIVPCPDP 222