BLASTX nr result

ID: Coptis21_contig00013018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00013018
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270511.1| PREDICTED: uncharacterized protein LOC100244...    92   8e-17
ref|XP_002526559.1| transcription factor, putative [Ricinus comm...    86   7e-15
ref|XP_004151997.1| PREDICTED: protein PHR1-LIKE 1-like isoform ...    72   6e-11
ref|XP_004151996.1| PREDICTED: protein PHR1-LIKE 1-like isoform ...    72   6e-11
ref|XP_003625354.1| Two-component response regulator ARR [Medica...    64   3e-08

>ref|XP_002270511.1| PREDICTED: uncharacterized protein LOC100244545 [Vitis vinifera]
          Length = 517

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 50/89 (56%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
 Frame = -3

Query: 268 LSIQGSRKKQLADVGISVAMSSSVPVYPISQEKKHPQWPDSQQVSLEREMMTNSMLPHST 89
           LSI+GS  KQL ++G S A+SSS+ V P S E+ HP+ PDSQQV + RE+MT     H++
Sbjct: 7   LSIRGSGSKQLNNLGASGALSSSLSVLPTSLEETHPKLPDSQQVYVGREIMTRPQAMHAS 66

Query: 88  LLASNSGVVGQIYSSASG-ASDLHFTSVS 5
            L SNSG VG I+SS+SG ++DLHF+SVS
Sbjct: 67  PLPSNSGAVGHIFSSSSGYSTDLHFSSVS 95


>ref|XP_002526559.1| transcription factor, putative [Ricinus communis]
           gi|223534120|gb|EEF35837.1| transcription factor,
           putative [Ricinus communis]
          Length = 491

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 47/95 (49%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
 Frame = -3

Query: 283 MEVRP-LSIQGSRKKQLADVGISVAMSSSVPVYPISQEKKHPQWPDSQQVSLEREMMTNS 107
           ME RP LSIQ S  KQL+++G+S A+SSS PV P S+E+ +P+  D+QQV++E+ +MT  
Sbjct: 1   MEARPTLSIQRSGVKQLSNLGVSGALSSSYPVLPTSREETYPKLSDAQQVAMEKGLMTRP 60

Query: 106 MLPHSTLLASNSGVVGQIYSSASG-ASDLHFTSVS 5
           ++ H+  L SN+GVVG ++SS++G ++DL ++SVS
Sbjct: 61  LV-HTNHLPSNNGVVGHLFSSSAGFSTDLQYSSVS 94


>ref|XP_004151997.1| PREDICTED: protein PHR1-LIKE 1-like isoform 2 [Cucumis sativus]
           gi|449509426|ref|XP_004163585.1| PREDICTED: protein
           PHR1-LIKE 1-like isoform 2 [Cucumis sativus]
          Length = 472

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 43/97 (44%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
 Frame = -3

Query: 286 RMEVRP-LSIQGSRKKQLADVGISVAMSSSVPVY-PISQEKKHPQWPDSQQVSLEREMMT 113
           ++E  P L+I GS  +Q    G++  +S S+ V  P S E+ +P+ PDSQQVS+ERE+++
Sbjct: 2   KIEASPALAIPGSNARQHNSAGVNKEISKSLRVLLPTSLEEVYPKLPDSQQVSMERELVS 61

Query: 112 NSMLPHSTLLASNSGVVGQIYSSASG-ASDLHFTSVS 5
             ++ HS  + S+SGVVG I+SS+ G ++DLH++SVS
Sbjct: 62  RPLV-HSNHIHSSSGVVGHIFSSSPGFSTDLHYSSVS 97


>ref|XP_004151996.1| PREDICTED: protein PHR1-LIKE 1-like isoform 1 [Cucumis sativus]
           gi|449509422|ref|XP_004163584.1| PREDICTED: protein
           PHR1-LIKE 1-like isoform 1 [Cucumis sativus]
          Length = 482

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 43/97 (44%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
 Frame = -3

Query: 286 RMEVRP-LSIQGSRKKQLADVGISVAMSSSVPVY-PISQEKKHPQWPDSQQVSLEREMMT 113
           ++E  P L+I GS  +Q    G++  +S S+ V  P S E+ +P+ PDSQQVS+ERE+++
Sbjct: 12  KIEASPALAIPGSNARQHNSAGVNKEISKSLRVLLPTSLEEVYPKLPDSQQVSMERELVS 71

Query: 112 NSMLPHSTLLASNSGVVGQIYSSASG-ASDLHFTSVS 5
             ++ HS  + S+SGVVG I+SS+ G ++DLH++SVS
Sbjct: 72  RPLV-HSNHIHSSSGVVGHIFSSSPGFSTDLHYSSVS 107


>ref|XP_003625354.1| Two-component response regulator ARR [Medicago truncatula]
           gi|355500369|gb|AES81572.1| Two-component response
           regulator ARR [Medicago truncatula]
          Length = 489

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/95 (40%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
 Frame = -3

Query: 283 MEVRP-LSIQGSRKKQLADVGISVAMSSSVPVYPISQEKKHPQWPDSQQVSLEREMMTNS 107
           ME RP  SI+ S  +QL ++G+S A+ SS+ V+P   E+ +P++ DSQ   +E+++ T +
Sbjct: 1   MEARPAFSIERSSSQQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPTYVEKDLKTKT 60

Query: 106 MLPHSTLLASNSGVVGQIYSSASG-ASDLHFTSVS 5
              HS+ + S+SG VG ++SS+ G ++DLH +S+S
Sbjct: 61  -FNHSSHI-SSSGAVGHMFSSSPGYSTDLHHSSLS 93


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