BLASTX nr result
ID: Coptis21_contig00013013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00013013
(1330 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2... 97 3e-21
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2... 93 3e-20
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 92 3e-20
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 91 9e-20
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica... 67 4e-15
>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
predicted protein [Populus trichocarpa]
Length = 331
Score = 96.7 bits (239), Expect(2) = 3e-21
Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Frame = +2
Query: 14 DAKVSSLIENGEWNQLVHNLPECDVKRSILLIDINDHLRIYQKT-VVWLSSPSDIFSSKA 190
+AKV+ LI+N EW I I N + ++ QK +VWL SP+ FS K
Sbjct: 89 NAKVNVLIQNSEWK--TPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFSVKV 146
Query: 191 AYQDLRKKRHTQNWCRMVWDKLVIPKHSFNGWQLFSGSLPTQDRLMHKKVLTSSQCCFCN 370
A++ LR+ RH W +VW K +P+HSF W + L TQD+L + ++C C
Sbjct: 147 AWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCL 206
Query: 371 GERENSKHLFFDCDYSKRVWLKV 439
E+ HLFF+C Y+K +W V
Sbjct: 207 RNNEDHNHLFFECSYTKAIWWDV 229
Score = 32.7 bits (73), Expect(2) = 3e-21
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 544 KAYVCATIGHIWSERNARRFQHHSITWQCLANTILREMKVYLSIKID---NVIDTPE 705
K AT+ H+W ERNAR F S T +N + +++ + K+D NV+ T E
Sbjct: 264 KLSFAATVYHVWQERNARIFAGLSRT----SNLVFNQIECIIRDKLDLMRNVVPTNE 316
>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
predicted protein [Populus trichocarpa]
Length = 1046
Score = 93.2 bits (230), Expect(2) = 3e-20
Identities = 50/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Frame = +2
Query: 14 DAKVSSLIENGEWNQLVHNLPECDVKRSILLIDINDHLRIYQKT-VVWLSSPSDIFSSKA 190
+AKV+ LI+N EW I I N + ++ QK ++WL SP+ FS K
Sbjct: 804 NAKVNVLIQNSEWK--TPTTQAIGWHPIIEAIPSNSNPKMGQKDEIIWLDSPNHRFSVKV 861
Query: 191 AYQDLRKKRHTQNWCRMVWDKLVIPKHSFNGWQLFSGSLPTQDRLMHKKVLTSSQCCFCN 370
A++ LR+ R W +VW K +P+HSF W + L TQD+L + ++C C
Sbjct: 862 AWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCL 921
Query: 371 GERENSKHLFFDCDYSKRVWLKV 439
E+ HLFF+C Y+K +W V
Sbjct: 922 RNNEDHNHLFFECSYTKAIWWDV 944
Score = 32.7 bits (73), Expect(2) = 3e-20
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 544 KAYVCATIGHIWSERNARRFQHHSITWQCLANTILREMKVYLSIKID---NVIDTPE 705
K AT+ H+W ERNAR F S T +N + +++ + K+D NV+ T E
Sbjct: 979 KLSFAATVYHVWQERNARIFAGLSRT----SNLVFNQIECIIRDKLDLMRNVVPTNE 1031
>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
predicted protein [Populus trichocarpa]
Length = 517
Score = 92.0 bits (227), Expect(2) = 3e-20
Identities = 51/143 (35%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Frame = +2
Query: 14 DAKVSSLIENGEWNQLVHNLPECDVKRSILLIDINDHLRIYQKT-VVWLSSPSDIFSSKA 190
+AKV+ LI+N EW I I N + ++ QK +VWL SP+ FS K
Sbjct: 271 NAKVNVLIQNSEWK--TPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKV 328
Query: 191 AYQDLRKKRHTQNWCRMVWDKLVIPKHSFNGWQLFSGSLPTQDRLMHKKVLTSSQCCFCN 370
A++ LR+ R W +VW K +P+HSF W L TQD+L + ++C C
Sbjct: 329 AWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCL 388
Query: 371 GERENSKHLFFDCDYSKRVWLKV 439
E+ HLFF+C Y+K +W V
Sbjct: 389 RNNEDHNHLFFECSYTKAIWWDV 411
Score = 33.9 bits (76), Expect(2) = 3e-20
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 544 KAYVCATIGHIWSERNARRFQHHSITWQCLANTILREMKVYLSIKID---NVIDTPE 705
K AT+ H+W ERNAR F S T N +L +++ + K+D NV+ T E
Sbjct: 446 KLSFAATVYHVWQERNARIFAGMSRT----PNLVLNQIECIIRDKLDLMRNVVPTNE 498
>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
predicted protein [Populus trichocarpa]
Length = 1386
Score = 90.5 bits (223), Expect(2) = 9e-20
Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Frame = +2
Query: 14 DAKVSSLIENGEWNQLVHNLPECDVKRSILLIDINDHLRIYQKT-VVWLSSPSDIFSSKA 190
+AKV+ LI+N EW I I N + ++ QK +VWL SP+ F K
Sbjct: 1144 NAKVNVLIQNSEWK--TPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFLVKV 1201
Query: 191 AYQDLRKKRHTQNWCRMVWDKLVIPKHSFNGWQLFSGSLPTQDRLMHKKVLTSSQCCFCN 370
A++ LR+ R W +VW K +P+HSF W L TQD+L + ++C C
Sbjct: 1202 AWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCL 1261
Query: 371 GERENSKHLFFDCDYSKRVWLKV 439
E+ HLFF+C Y+K +W V
Sbjct: 1262 RNNEDHNHLFFECSYTKAIWWDV 1284
Score = 33.9 bits (76), Expect(2) = 9e-20
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 544 KAYVCATIGHIWSERNARRFQHHSITWQCLANTILREMKVYLSIKID---NVIDTPE 705
K AT+ H+W ERNAR F S T N +L +++ + K+D NV+ T E
Sbjct: 1319 KLSFAATVYHVWQERNARIFAGMSRT----PNLVLNQIECIIRDKLDLMRNVVPTNE 1371
>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
protein ccsA [Medicago truncatula]
Length = 666
Score = 67.4 bits (163), Expect(2) = 4e-15
Identities = 27/84 (32%), Positives = 47/84 (55%)
Frame = +2
Query: 179 SSKAAYQDLRKKRHTQNWCRMVWDKLVIPKHSFNGWQLFSGSLPTQDRLMHKKVLTSSQC 358
+++ AY+ + + + W + +W+ + P SF W+L LPT + L + L S C
Sbjct: 19 TNQLAYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIVSIC 78
Query: 359 CFCNGERENSKHLFFDCDYSKRVW 430
CFC E+S+H+FF+C + R+W
Sbjct: 79 CFCMKSAESSQHIFFECHVTSRLW 102
Score = 41.2 bits (95), Expect(2) = 4e-15
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Frame = +1
Query: 538 VIKAYVCATIGHIWSERNARRFQHHSITWQCLANTILREMKVYLS---IKIDNVIDTPEI 708
++ + + TI IW ERN R F + L N IL E+K+ S IK ++ + ++
Sbjct: 136 ILNSAIIHTIWSIWIERNQRCFHNKHQAMTTLFNIILAEVKMSFSLCMIKGNSAMQDYKV 195
Query: 709 RSLLTRLDIQVKYMIKPPTICKWKLPPSGYIKLNTNG-SVTEQRVGYGGLAV-DENGQVL 882
L + +VK + P WK P +K+N +G SV G G+ + D N L
Sbjct: 196 AKLF-NIPFKVK-RVTPHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDSNHHFL 253
Query: 883 FSFTGG-GNRTSV-------LYQVLKAIEVGL-SICLQNQLSKI 987
+ + GN T + + + KA E+ L +CL+ K+
Sbjct: 254 GAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKV 297