BLASTX nr result

ID: Coptis21_contig00012995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012995
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77034.1| hypothetical protein VITISV_009309 [Vitis vinifera]   123   2e-26
ref|XP_002528918.1| conserved hypothetical protein [Ricinus comm...   106   2e-21
emb|CBI16584.3| unnamed protein product [Vitis vinifera]               90   2e-16
emb|CAN65350.1| hypothetical protein VITISV_000640 [Vitis vinifera]    87   2e-15
tpg|DAA46289.1| TPA: hypothetical protein ZEAMMB73_412034 [Zea m...    66   5e-09

>emb|CAN77034.1| hypothetical protein VITISV_009309 [Vitis vinifera]
          Length = 618

 Score =  123 bits (308), Expect = 2e-26
 Identities = 73/172 (42%), Positives = 95/172 (55%), Gaps = 4/172 (2%)
 Frame = -2

Query: 509 IICDLCNVKCDTTAVFETHLAGKKHISKLKRFQGHQAMFGPVGLQALYPPNPNTQPIFIP 330
           +ICDLCNVKCDT  VF+ HL+GKKHI+KLKRF+GHQAM+GP+GLQALYPPNP  Q +  P
Sbjct: 282 LICDLCNVKCDTQEVFDRHLSGKKHIAKLKRFEGHQAMYGPMGLQALYPPNPIAQTLLHP 341

Query: 329 QVHQRT-MYPPRGSFHQPVPYVPHXXXXXXXXXXXXXTQQASTASEFQVKQNHESYGAPI 153
           Q HQ+   Y P GSF    PY+P                 A   ++FQ            
Sbjct: 342 QGHQQQGFYSPPGSFPPQGPYMP-------PQAHQAAPPAAGAVTQFQ------------ 382

Query: 152 AWDRCQNDVVQGSEGQRIHVVGQEGHLAVVNQSEE---RVVDNRLEQSIITQ 6
                QN + QGSE       G E  ++VV++ ++   RV   R E+S+  +
Sbjct: 383 -----QNAIPQGSEAH--PGSGSEAVVSVVHEPQQQFARVESGRKEESVTAE 427


>ref|XP_002528918.1| conserved hypothetical protein [Ricinus communis]
           gi|223531620|gb|EEF33447.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 725

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/103 (52%), Positives = 65/103 (63%)
 Frame = -2

Query: 569 RTSDRPTRXXXXXXXXXXXPIICDLCNVKCDTTAVFETHLAGKKHISKLKRFQGHQAMFG 390
           +TS+   R           P+ICDLCNVKCDT  V + HL+GKKHI+KLKRF+GHQA++G
Sbjct: 588 KTSETHRRPVEPPKPKVVVPLICDLCNVKCDTREVLDRHLSGKKHIAKLKRFEGHQAIYG 647

Query: 389 PVGLQALYPPNPNTQPIFIPQVHQRTMYPPRGSFHQPVPYVPH 261
           P GLQALYPPNP  Q   + Q  Q   Y P+GSF    P   H
Sbjct: 648 PTGLQALYPPNPVAQTHLVSQGPQ-PFYAPQGSFLPRFPSQAH 689


>emb|CBI16584.3| unnamed protein product [Vitis vinifera]
          Length = 679

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
 Frame = -2

Query: 509 IICDLCNVKCDTTAVFETHLAGKKHISKLKRFQGHQAMFGPVGLQALYPPNPNT-QPIFI 333
           +IC+LCNVKC++  VF++HLAGKKH S LKRF G+QA+     LQAL P NPN     FI
Sbjct: 266 LICELCNVKCESQVVFDSHLAGKKHHSNLKRFHGYQAIIAG-ALQALIPSNPNAPSNFFI 324

Query: 332 PQVHQRTMYPPRGSFHQPVPYV 267
           PQVHQ+ +   +G   QP+PY+
Sbjct: 325 PQVHQQGVSGSQGLPAQPMPYM 346


>emb|CAN65350.1| hypothetical protein VITISV_000640 [Vitis vinifera]
          Length = 628

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/80 (55%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
 Frame = -2

Query: 509 IICDLCNVKCDTTAVFETHLAGKKHISKLKRFQGHQAMFGPVGLQALYPPNPNT-QPIFI 333
           +IC+LCNVKC++  VF++HLAGKKH S LKRF G+QA+     LQAL P NPN     FI
Sbjct: 424 LICELCNVKCESQVVFDSHLAGKKHHSNLKRFHGYQAIIAG-ALQALIPSNPNAPSNFFI 482

Query: 332 PQVHQRTMYPPRGSFHQPVP 273
           PQVHQ+ +   +G   QP+P
Sbjct: 483 PQVHQQGVSGSQGLPAQPMP 502


>tpg|DAA46289.1| TPA: hypothetical protein ZEAMMB73_412034 [Zea mays]
          Length = 375

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 30/51 (58%), Positives = 37/51 (72%)
 Frame = -2

Query: 509 IICDLCNVKCDTTAVFETHLAGKKHISKLKRFQGHQAMFGPVGLQALYPPN 357
           ++C++CNV CDT AVF+ HL GKKH S+LKR QG   +FGP  L A  PPN
Sbjct: 278 LVCNICNVTCDTRAVFDIHLGGKKHQSRLKRSQGPDMLFGP--LVARVPPN 326


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