BLASTX nr result

ID: Coptis21_contig00012993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012993
         (1486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308695.1| predicted protein [Populus trichocarpa] gi|2...   415   e-113
ref|XP_002308697.1| predicted protein [Populus trichocarpa] gi|2...   413   e-113
ref|XP_002263220.2| PREDICTED: probable chitinase 3-like [Vitis ...   388   e-105
emb|CAN60686.1| hypothetical protein VITISV_036053 [Vitis vinifera]   386   e-105
emb|CBI25622.3| unnamed protein product [Vitis vinifera]              384   e-104

>ref|XP_002308695.1| predicted protein [Populus trichocarpa] gi|222854671|gb|EEE92218.1|
            predicted protein [Populus trichocarpa]
          Length = 497

 Score =  415 bits (1066), Expect = e-113
 Identities = 214/429 (49%), Positives = 271/429 (63%), Gaps = 3/429 (0%)
 Frame = -1

Query: 1411 AVSAFPVHPIPYTLVPSSSAPAPVYHPPVTSGPAMH-GSPQ-MPDSPGLHTVXXXXXXXX 1238
            AV A P +P P T  P   AP+P Y+ P+ + P+    SP  +P  PG+           
Sbjct: 75   AVPATPSYP-PQTAPPMKPAPSPAYYLPIPAAPSYSVPSPSAVPAYPGVPA----SSPPL 129

Query: 1237 XXXXXXXXXXXXXXXXXXXXXXXXXSKGVKGAYWPSFTGFPVSSIDTSYFTHLYYAFLLP 1058
                                      KG+KGAYWPSF GF  SSIDTSYFTH++YAFLLP
Sbjct: 130  PTPAASPVSYPPVPASPEPYPSPPDHKGIKGAYWPSFDGFEASSIDTSYFTHIFYAFLLP 189

Query: 1057 DPITSKLNITTNDEEMLPAFIATLNTPNSHVKTLLSIGGGG-CDPKVFSAIFNSSSSRAI 881
            DP+T KLN+T  D++ +P FI  L T N  VKTLLS+GGG      +F+ +  +  +R +
Sbjct: 190  DPVTFKLNVTPFDQQKIPGFIQNLRTRNPPVKTLLSMGGGSDAIALIFANLSGAQETRKV 249

Query: 880  FMQSGIEIARQYGFDGLDLDWEFPNSQEDMSNLGTLYKEWREAFNKEAKATGRTRLLLTS 701
            F+ S IE+AR YGFDGLDLDWE+P + ++M NL  L KEW EA   EA A+G+ RLLLT+
Sbjct: 250  FIDSTIEVARTYGFDGLDLDWEYPANDQEMINLALLVKEWHEALVHEASASGKPRLLLTA 309

Query: 700  AVYFASKYPISDVVGSLYPGEAIRRYVDWINPMCYDYHGSWDSVTGQPSALYDQNSNIST 521
            AVY++S++    +  S YP ++I +YVDWINPMCYDYHG+W++ TG  +ALYD  SN+ST
Sbjct: 310  AVYYSSQFTTFGLPRS-YPADSINKYVDWINPMCYDYHGTWENFTGPNAALYDPKSNVST 368

Query: 520  SYGIKSWIEAGVPPKKLAMGLPLYAHTWTLKDPXXXXXXXXXXXXXXXXXILIYSRVVDF 341
            S+GI SWI+AGV PKKL MGLPLY  TW L DP                 IL Y +V++F
Sbjct: 369  SFGIGSWIQAGVSPKKLVMGLPLYGRTWKLLDPNVNGIGARAVGKGPEDGILDYYQVLEF 428

Query: 340  NSASNATVVYDGTTSSMYSYAGNVWIGYDDPLSVKKKVQFARSYRLGGYFFWALGQDKDW 161
            N  +NA V +DG T S YSYAG  W+GYDD +++  KVQFARS  LGGYFFWALGQDKDW
Sbjct: 429  NKENNAIVNFDGQTVSYYSYAGGFWVGYDDSITIDWKVQFARSRGLGGYFFWALGQDKDW 488

Query: 160  SISRQASSA 134
             IS+Q   A
Sbjct: 489  IISKQGKDA 497


>ref|XP_002308697.1| predicted protein [Populus trichocarpa] gi|222854673|gb|EEE92220.1|
            predicted protein [Populus trichocarpa]
          Length = 431

 Score =  413 bits (1061), Expect = e-113
 Identities = 214/430 (49%), Positives = 270/430 (62%), Gaps = 3/430 (0%)
 Frame = -1

Query: 1414 LAVSAFPVHPIPYTLVPSSSAPAPVYHPPVTSGPAMH-GSPQ-MPDSPGLHTVXXXXXXX 1241
            L V A P +P P T  P   AP+P Y+ P+ + P+    SP  +P  PG+          
Sbjct: 8    LTVPATPSYP-PQTAHPMKPAPSPAYYLPIPAAPSYSVPSPSAVPTYPGVPA----SSPP 62

Query: 1240 XXXXXXXXXXXXXXXXXXXXXXXXXXSKGVKGAYWPSFTGFPVSSIDTSYFTHLYYAFLL 1061
                                       KG+KGAYWPSF GF  SSIDTSYFTH++YAFLL
Sbjct: 63   LPTPAASPVSYPPVPAPPEPYPSPPDHKGIKGAYWPSFDGFEASSIDTSYFTHIFYAFLL 122

Query: 1060 PDPITSKLNITTNDEEMLPAFIATLNTPNSHVKTLLSIGGGG-CDPKVFSAIFNSSSSRA 884
            PDP+T KLN+T  D++ +P FI  L T N  VKTLLS+GGG      +F+ +  +  +R 
Sbjct: 123  PDPVTFKLNVTPFDQQKIPGFIQNLRTRNPPVKTLLSMGGGSDAIALIFANLSGAQETRK 182

Query: 883  IFMQSGIEIARQYGFDGLDLDWEFPNSQEDMSNLGTLYKEWREAFNKEAKATGRTRLLLT 704
            +F+ S IE+AR YGFDGLDLDWE+P + ++M NL  L KEW EA   EA A+G+ RLLLT
Sbjct: 183  VFIDSTIEVARTYGFDGLDLDWEYPANDQEMINLALLVKEWHEALVHEASASGKPRLLLT 242

Query: 703  SAVYFASKYPISDVVGSLYPGEAIRRYVDWINPMCYDYHGSWDSVTGQPSALYDQNSNIS 524
            +AVY++S++    +  S YP ++I +YVDWINPMCYDYHG+W++ TG  +ALYD  SN+S
Sbjct: 243  AAVYYSSQFTTFGLPRS-YPADSINKYVDWINPMCYDYHGTWENFTGPNAALYDPKSNVS 301

Query: 523  TSYGIKSWIEAGVPPKKLAMGLPLYAHTWTLKDPXXXXXXXXXXXXXXXXXILIYSRVVD 344
            TS GI SWI+AGV PKKL MGLPLY  TW L DP                 IL Y +V++
Sbjct: 302  TSSGIGSWIQAGVSPKKLVMGLPLYGRTWKLLDPNVNGIGARAVGKGPEDGILDYYQVLE 361

Query: 343  FNSASNATVVYDGTTSSMYSYAGNVWIGYDDPLSVKKKVQFARSYRLGGYFFWALGQDKD 164
            FN  +NA V +DG T S YSYAG  W+GYDD +++  KVQFARS  LGGYFFWALGQDKD
Sbjct: 362  FNKENNAIVNFDGQTVSYYSYAGGFWVGYDDSITIDWKVQFARSRGLGGYFFWALGQDKD 421

Query: 163  WSISRQASSA 134
            W IS+Q   A
Sbjct: 422  WIISKQGKDA 431


>ref|XP_002263220.2| PREDICTED: probable chitinase 3-like [Vitis vinifera]
          Length = 717

 Score =  388 bits (997), Expect = e-105
 Identities = 214/435 (49%), Positives = 263/435 (60%), Gaps = 11/435 (2%)
 Frame = -1

Query: 1399 FPVHPIPYT-----LVPSSSAP-APVYHP-PVTSGPAMHGSPQ-MPDSPGLHTVXXXXXX 1244
            FP+ P+P       LVPSS +P AP+  P P  S P    SP   P SP  +        
Sbjct: 307  FPIPPVPVPIASPPLVPSSPSPYAPMPAPVPTPSVPTPSTSPPPFPPSPSPYA------- 359

Query: 1243 XXXXXXXXXXXXXXXXXXXXXXXXXXXSKGVKGAYWPSFTG--FPVSSIDTSYFTHLYYA 1070
                                       S G+KGAYWPS+     P   I TSYFTHL+YA
Sbjct: 360  -------------------PMPVPTPSSSGIKGAYWPSWLAESLPPVGIPTSYFTHLFYA 400

Query: 1069 FLLPDPITSKLNITTNDEEMLPAFIATLNTPNSHVKTLLSIGGGGCDPKVFSAIFNSSSS 890
            F+  D    +L+IT  DE+ +  F ATL+  N   K  LSIGGG   P  FS +     +
Sbjct: 401  FVQLDASAYQLSITQPDEQWMGNFTATLHAKNPLAKAFLSIGGGASSPYTFSKMAGDPDN 460

Query: 889  RAIFMQSGIEIARQYGFDGLDLDWEFPNSQEDMSNLGTLYKEWREAFNKEAKATGRTRLL 710
            RA F+ S I++AR+YGFDGLDLDWEFP + +DMSNL  LY EW  A  KEA  +G+ +LL
Sbjct: 461  RAAFINSTIDVARKYGFDGLDLDWEFPTNPQDMSNLAILYSEWHAAVKKEAHYSGQYKLL 520

Query: 709  LTSAVYFASKYPISDVVGSLYPGEAIRRYVDWINPMCYDYHGSWD-SVTGQPSALYDQNS 533
            L+SAVYFAS + +SDV  S YP +AI++YVD+++PMC+DYHGSWD SVTG  + LYD+ S
Sbjct: 521  LSSAVYFASDFFLSDVPRS-YPADAIKKYVDFVSPMCFDYHGSWDTSVTGAHALLYDKAS 579

Query: 532  NISTSYGIKSWIEAGVPPKKLAMGLPLYAHTWTLKDPXXXXXXXXXXXXXXXXXILIYSR 353
            NISTSYGI SWIEAGVPP+KL MGLPLY  TW LKD                  I+ Y+ 
Sbjct: 580  NISTSYGISSWIEAGVPPEKLVMGLPLYGRTWELKDQNKHGIGDPAVGTGPGDGIMAYTN 639

Query: 352  VVDFNSASNATVVYDGTTSSMYSYAGNVWIGYDDPLSVKKKVQFARSYRLGGYFFWALGQ 173
            +VDFNS   ATVVYD  T S YSYAG  WIGYD P+S + KV+FA    LGGYF WALG 
Sbjct: 640  IVDFNSEKGATVVYDEETVSTYSYAGTNWIGYDGPISTENKVKFAWEQGLGGYFLWALGD 699

Query: 172  DKDWSISRQASSAWE 128
            DK+W++S+ AS AW+
Sbjct: 700  DKNWTLSKAASKAWD 714


>emb|CAN60686.1| hypothetical protein VITISV_036053 [Vitis vinifera]
          Length = 618

 Score =  386 bits (992), Expect = e-105
 Identities = 213/435 (48%), Positives = 262/435 (60%), Gaps = 11/435 (2%)
 Frame = -1

Query: 1399 FPVHPIPYT-----LVPSSSAP-APVYHP-PVTSGPAMHGSPQ-MPDSPGLHTVXXXXXX 1244
            FP+ P+P       LVPSS +P AP+  P P  S P    SP   P SP  +        
Sbjct: 208  FPIPPVPVPIASPPLVPSSPSPYAPMPAPVPTPSVPTPSTSPPPFPPSPSPYA------- 260

Query: 1243 XXXXXXXXXXXXXXXXXXXXXXXXXXXSKGVKGAYWPSFTG--FPVSSIDTSYFTHLYYA 1070
                                       S G+KGAYWPS+     P   I TSYFTHL+YA
Sbjct: 261  -------------------PMPVPTPSSSGIKGAYWPSWLAESLPPVGIPTSYFTHLFYA 301

Query: 1069 FLLPDPITSKLNITTNDEEMLPAFIATLNTPNSHVKTLLSIGGGGCDPKVFSAIFNSSSS 890
            F+  D    +L+IT  DE+ +  F ATL+  N   K   SIGGG   P  FS +     +
Sbjct: 302  FVQLDASAYQLSITQPDEQWMGNFTATLHAKNPLAKAFXSIGGGASSPYTFSKMAGDPDN 361

Query: 889  RAIFMQSGIEIARQYGFDGLDLDWEFPNSQEDMSNLGTLYKEWREAFNKEAKATGRTRLL 710
            RA F+ S I++AR+YGFDGLDLDWEFP + +DMSNL  LY EW  A  KEA  +G+ +LL
Sbjct: 362  RAAFINSTIDVARKYGFDGLDLDWEFPTNPQDMSNLAILYSEWHAAVKKEAHYSGQYKLL 421

Query: 709  LTSAVYFASKYPISDVVGSLYPGEAIRRYVDWINPMCYDYHGSWD-SVTGQPSALYDQNS 533
            L+SAVYFAS + +SDV  S YP +AI++YVD+++PMC+DYHGSWD SVTG  + LYD+ S
Sbjct: 422  LSSAVYFASDFFLSDVPRS-YPADAIKKYVDFVSPMCFDYHGSWDTSVTGAHALLYDKAS 480

Query: 532  NISTSYGIKSWIEAGVPPKKLAMGLPLYAHTWTLKDPXXXXXXXXXXXXXXXXXILIYSR 353
            NISTSYGI SWIEAGVPP+KL MGLPLY  TW LKD                  I+ Y+ 
Sbjct: 481  NISTSYGISSWIEAGVPPEKLVMGLPLYGRTWELKDQNKHGIGDPAVGTGPGDGIMAYTN 540

Query: 352  VVDFNSASNATVVYDGTTSSMYSYAGNVWIGYDDPLSVKKKVQFARSYRLGGYFFWALGQ 173
            +VDFNS   ATVVYD  T S YSYAG  WIGYD P+S + KV+FA    LGGYF WALG 
Sbjct: 541  IVDFNSEKGATVVYDEETVSTYSYAGTNWIGYDGPISTENKVKFAWEQGLGGYFLWALGD 600

Query: 172  DKDWSISRQASSAWE 128
            DK+W++S+ AS AW+
Sbjct: 601  DKNWTLSKAASKAWD 615


>emb|CBI25622.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  384 bits (987), Expect = e-104
 Identities = 192/346 (55%), Positives = 236/346 (68%), Gaps = 3/346 (0%)
 Frame = -1

Query: 1156 GVKGAYWPSFTG--FPVSSIDTSYFTHLYYAFLLPDPITSKLNITTNDEEMLPAFIATLN 983
            G+KGAYWPS+     P   I TSYFTHL+YAF+  D    +L+IT  DE+ +  F ATL+
Sbjct: 10   GIKGAYWPSWLAESLPPVGIPTSYFTHLFYAFVQLDASAYQLSITQPDEQWMGNFTATLH 69

Query: 982  TPNSHVKTLLSIGGGGCDPKVFSAIFNSSSSRAIFMQSGIEIARQYGFDGLDLDWEFPNS 803
              N   K  LSIGGG   P  FS +     +RA F+ S I++AR+YGFDGLDLDWEFP +
Sbjct: 70   AKNPLAKAFLSIGGGASSPYTFSKMAGDPDNRAAFINSTIDVARKYGFDGLDLDWEFPTN 129

Query: 802  QEDMSNLGTLYKEWREAFNKEAKATGRTRLLLTSAVYFASKYPISDVVGSLYPGEAIRRY 623
             +DMSNL  LY EW  A  KEA  +G+ +LLL+SAVYFAS + +SDV  S YP +AI++Y
Sbjct: 130  PQDMSNLAILYSEWHAAVKKEAHYSGQYKLLLSSAVYFASDFFLSDVPRS-YPADAIKKY 188

Query: 622  VDWINPMCYDYHGSWD-SVTGQPSALYDQNSNISTSYGIKSWIEAGVPPKKLAMGLPLYA 446
            VD+++PMC+DYHGSWD SVTG  + LYD+ SNISTSYGI SWIEAGVPP+KL MGLPLY 
Sbjct: 189  VDFVSPMCFDYHGSWDTSVTGAHALLYDKASNISTSYGISSWIEAGVPPEKLVMGLPLYG 248

Query: 445  HTWTLKDPXXXXXXXXXXXXXXXXXILIYSRVVDFNSASNATVVYDGTTSSMYSYAGNVW 266
             TW LKD                  I+ Y+ +VDFNS   ATVVYD  T S YSYAG  W
Sbjct: 249  RTWELKDQNKHGIGDPAVGTGPGDGIMAYTNIVDFNSEKGATVVYDEETVSTYSYAGTNW 308

Query: 265  IGYDDPLSVKKKVQFARSYRLGGYFFWALGQDKDWSISRQASSAWE 128
            IGYD P+S + KV+FA    LGGYF WALG DK+W++S+ AS AW+
Sbjct: 309  IGYDGPISTENKVKFAWEQGLGGYFLWALGDDKNWTLSKAASKAWD 354


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