BLASTX nr result
ID: Coptis21_contig00012992
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00012992 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513166.1| conserved hypothetical protein [Ricinus comm... 62 4e-08 ref|XP_003632684.1| PREDICTED: uncharacterized protein LOC100854... 62 5e-08 ref|XP_002283124.1| PREDICTED: uncharacterized protein LOC100250... 62 6e-08 ref|XP_002308971.1| predicted protein [Populus trichocarpa] gi|2... 61 1e-07 gb|ABK92800.1| unknown [Populus trichocarpa] 60 1e-07 >ref|XP_002513166.1| conserved hypothetical protein [Ricinus communis] gi|223547664|gb|EEF49157.1| conserved hypothetical protein [Ricinus communis] Length = 68 Score = 62.4 bits (150), Expect = 4e-08 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 5/66 (7%) Frame = -1 Query: 360 SISKAALIFTIVAVFSIIA-VSAQD----APAPAPAYITGAAFSVSVSGAVLCSSLFVSL 196 S A++F + A+ ++ A VSAQD APAPAP+ GAA+S+ +SGAV+CSSLF+S+ Sbjct: 3 SNQSVAVVFLLAALAAVAATVSAQDLGNLAPAPAPSMDKGAAYSLGMSGAVICSSLFLSM 62 Query: 195 LAFLKH 178 +A LKH Sbjct: 63 VALLKH 68 >ref|XP_003632684.1| PREDICTED: uncharacterized protein LOC100854383 [Vitis vinifera] Length = 67 Score = 62.0 bits (149), Expect = 5e-08 Identities = 36/67 (53%), Positives = 51/67 (76%), Gaps = 2/67 (2%) Frame = -1 Query: 372 LSNLSISKAALIFTIVAVFSIIA-VSAQD-APAPAPAYITGAAFSVSVSGAVLCSSLFVS 199 ++ +SI+KA ++ +VA+FS A VSA D +PAPAP+ G+AFS+ +SGAV+ SSL S Sbjct: 1 MAQVSIAKALMLVFVVAIFSAAATVSALDNSPAPAPSPDAGSAFSLPLSGAVVASSLVFS 60 Query: 198 LLAFLKH 178 LLAFLK+ Sbjct: 61 LLAFLKY 67 >ref|XP_002283124.1| PREDICTED: uncharacterized protein LOC100250444 [Vitis vinifera] Length = 67 Score = 61.6 bits (148), Expect = 6e-08 Identities = 36/67 (53%), Positives = 51/67 (76%), Gaps = 2/67 (2%) Frame = -1 Query: 372 LSNLSISKAALIFTIVAVFSIIA-VSAQD-APAPAPAYITGAAFSVSVSGAVLCSSLFVS 199 ++ +SI+KA ++ +VA+FS A VSA D +PAPAP+ G+AFS+ +SGAV+ SSL S Sbjct: 1 MAQVSIAKAFMLVFVVAIFSAAATVSALDNSPAPAPSPDAGSAFSLPLSGAVVASSLVFS 60 Query: 198 LLAFLKH 178 LLAFLK+ Sbjct: 61 LLAFLKY 67 >ref|XP_002308971.1| predicted protein [Populus trichocarpa] gi|222854947|gb|EEE92494.1| predicted protein [Populus trichocarpa] Length = 66 Score = 60.8 bits (146), Expect = 1e-07 Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Frame = -1 Query: 372 LSNLSISKAALIFTIVAVFSIIA-VSAQDAPAPAPAYITGAAFSVSVSGAVLCSSLFVSL 196 ++ +S+SKA L IVA+ S+ A VSAQ APAPAP+ TG FS+ G ++ SL VSL Sbjct: 1 MAKVSVSKAVLFTFIVAMLSVAASVSAQLAPAPAPSMNTGTGFSLPAPGVIVGFSLMVSL 60 Query: 195 LAFLK 181 LAFLK Sbjct: 61 LAFLK 65 >gb|ABK92800.1| unknown [Populus trichocarpa] Length = 68 Score = 60.5 bits (145), Expect = 1e-07 Identities = 36/64 (56%), Positives = 44/64 (68%), Gaps = 4/64 (6%) Frame = -1 Query: 357 ISKAALIFTIVAVFSIIAVSAQD----APAPAPAYITGAAFSVSVSGAVLCSSLFVSLLA 190 I KA L+F ++A F++ VSAQD APAPAP GA FS+ VSGA++ SL VSLL Sbjct: 7 IPKAFLLFLLIAAFAV--VSAQDSESMAPAPAPGMEAGAGFSLPVSGAMVGFSLVVSLLG 64 Query: 189 FLKH 178 FLKH Sbjct: 65 FLKH 68