BLASTX nr result
ID: Coptis21_contig00012987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00012987
(1979 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding... 816 0.0
ref|XP_002326828.1| chromatin remodeling complex subunit [Populu... 765 0.0
ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223... 746 0.0
ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding... 746 0.0
ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding... 736 0.0
>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
vinifera]
Length = 876
Score = 816 bits (2109), Expect = 0.0
Identities = 418/585 (71%), Positives = 479/585 (81%), Gaps = 3/585 (0%)
Frame = +3
Query: 3 APLVSLQKKVYLSILRKELPKLLAFSSGSSNQPSLQNIVIQLRKACSHPYLFXXXXXXXX 182
APLVSLQKKVY+SILRKELPKLLAFSSG S SLQNIVIQLRKACSHPYLF
Sbjct: 295 APLVSLQKKVYMSILRKELPKLLAFSSGPSGHQSLQNIVIQLRKACSHPYLFPGIEPEPY 354
Query: 183 XXXXHLVQASGKLIVLDKLLQKLHAAGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGS 362
HLVQASGKLI+LD+LLQKL+ +GHRVLLFAQMTHTLDILQDF+ELRKYSYERLDGS
Sbjct: 355 EEGEHLVQASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQDFMELRKYSYERLDGS 414
Query: 363 IRAEERFAAIRSFSHQPVKSSLDSESNQNSAFVFMISTRAGGVGLNLVAADTVIFYEQDW 542
+RAEERF+AIRSFS Q V+ SL+S+ Q+SAFVFMISTRAGGVGLNLVAADTVIFYEQDW
Sbjct: 415 VRAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGVGLNLVAADTVIFYEQDW 474
Query: 543 NPQVDKQALQRAHRIGQMNHVLSVNLVTRCTVEEVIIRRAERKLQLSHNVIGENDTDKKG 722
NPQVDKQALQRAHRIGQMNHVLS+NLVT TVEE+I+RRAERKLQLSHNV+GE D D++G
Sbjct: 475 NPQVDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNVVGEVDIDREG 534
Query: 723 NEIE-VDTGDLRSVIFGLHMFDFTNVNDEDSDEVNMEQLSAMTDRLIEMRNVPSSHTDSK 899
E+ + GDLRSVIFGL M D + +N+++S E NM +L AM D+++ +R+ D +
Sbjct: 535 KEMAGAEAGDLRSVIFGLRMIDPSEINNDESSEPNMSELDAMADKVVAIRHEQQLGKDDR 594
Query: 900 KFEVNPVEFFKGSGFAMTKDSVKNNFDPGLDEESYNSWVEKFKEASKLDDTPTMELGVRR 1079
KFEVNP++ KG M + SV +FDPGLDE SY WVEKFKEAS+ D P +++G RR
Sbjct: 595 KFEVNPMDLLKGHDLIMDRSSVSVDFDPGLDEASYLVWVEKFKEASQSSDDPIIQVGNRR 654
Query: 1080 SLHEEKHKRLESSRKKT-EEKLQKWEAQGYQSLSVHDPICDIEGHMLLDSGSVQFVYGDC 1256
L EEK +LE++RKK EEKL KWEA GY SLSV DP ++ M+ DSGSV FVYGDC
Sbjct: 655 KLPEEKLLKLEAARKKAEEEKLAKWEAHGYNSLSVKDPPSHVDVDMISDSGSVDFVYGDC 714
Query: 1257 THPSNVCPSEPCIIFSCVDNSGNWGHGGMFDALAKLSPSVPDAYERAFQFKDLHMGDLHL 1436
T PS VCPSE IIFSC+D+SG WGHGGMFDALA+LS SVPDAY+RA +FKDLH+GDLH
Sbjct: 715 TLPSKVCPSEATIIFSCIDDSGIWGHGGMFDALARLSSSVPDAYQRASEFKDLHLGDLHF 774
Query: 1437 IRTSEDCDE-KADERTLQWVALAVVQSYNIRRKIPRSNISIPDLETCLSKAAFTAAQNSA 1613
I+ +EDC+E + D QWVALAVVQSYN RRK+PRSNIS+PDLE CLSKA+F AAQ SA
Sbjct: 775 IKINEDCEEQRMDCNAPQWVALAVVQSYNPRRKVPRSNISVPDLECCLSKASFLAAQKSA 834
Query: 1614 SIHMPRIGYQNGSDRSEWYTVERLLRKYASMYGINIFVYYFRRAS 1748
SIHMPRIGYQ DRSEWYTVERLLRKYAS+YGI IFVYYFRR+S
Sbjct: 835 SIHMPRIGYQ---DRSEWYTVERLLRKYASLYGIKIFVYYFRRSS 876
>ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222835143|gb|EEE73578.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 866
Score = 765 bits (1976), Expect = 0.0
Identities = 393/578 (67%), Positives = 465/578 (80%), Gaps = 3/578 (0%)
Frame = +3
Query: 3 APLVSLQKKVYLSILRKELPKLLAFSSGSSNQPSLQNIVIQLRKACSHPYLFXXXXXXXX 182
APLVSLQKKVY SILRKELPKLLA SS +SN SLQN+VIQLRKACSHPYLF
Sbjct: 291 APLVSLQKKVYTSILRKELPKLLALSSSASNHQSLQNMVIQLRKACSHPYLFPGIEPEPY 350
Query: 183 XXXXHLVQASGKLIVLDKLLQKLHAAGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGS 362
HLV+ASGKLI+LD+LL+KLH +GHRVLLFAQMTHTLDILQDFLELRKYSYERLDGS
Sbjct: 351 EEGEHLVKASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGS 410
Query: 363 IRAEERFAAIRSFSHQPVKSSLDSESNQNSAFVFMISTRAGGVGLNLVAADTVIFYEQDW 542
+RAEERFAAIRSFS Q +S SES+QNS+FVFMISTRAGGVGLNLVAADTVIFYEQDW
Sbjct: 411 VRAEERFAAIRSFSGQSGRSG--SESDQNSSFVFMISTRAGGVGLNLVAADTVIFYEQDW 468
Query: 543 NPQVDKQALQRAHRIGQMNHVLSVNLVTRCTVEEVIIRRAERKLQLSHNVIGENDTDKKG 722
NPQVDKQALQRAHRIGQMNHVLS+NLVTR +VEEVI++RA+RKLQLSH+V+G++ ++
Sbjct: 469 NPQVDKQALQRAHRIGQMNHVLSINLVTRHSVEEVIMQRAKRKLQLSHDVVGDDVMEEDR 528
Query: 723 NEI-EVDTGDLRSVIFGLHMFDFTNVNDEDSDEVNMEQLSAMTDRLIEMRNVPSSHTDSK 899
E ++TGDLRS+IFGLH FD + VN E S+E+N +L A+ ++I +R D +
Sbjct: 529 KETGGIETGDLRSIIFGLHRFDPSEVNSEKSNELNASELKALAQKVIALRCDQILDKDDR 588
Query: 900 KFEVNPVEFFKGSGFAMTKDSVKNNFDPGLDEESYNSWVEKFKEASKLDDTPTMELGVRR 1079
KFEVNP+ KG F +S ++DPGLDE SY SWVEKFKE S+ ++ M+LG RR
Sbjct: 589 KFEVNPIGQEKGLDFVSGGESALASYDPGLDEASYLSWVEKFKETSQSNENLVMDLGNRR 648
Query: 1080 SLHEEKHKRLESSRKKTEE-KLQKWEAQGYQSLSVHDPICDIEGHMLLDSGSVQFVYGDC 1256
+L + K+ LE+++KK EE KL KWEA GY SLSV DPI ++G L DSG V FV GDC
Sbjct: 649 NLPDNKYLNLEAAKKKAEEKKLSKWEALGYHSLSVGDPIYPVDGDALSDSGFVHFVVGDC 708
Query: 1257 THPSNVCPSEPCIIFSCVDNSGNWGHGGMFDALAKLSPSVPDAYERAFQFKDLHMGDLHL 1436
THP +C SEP +IFSCVD SGNWGHGGMFDALAKLS S+P AY++A +F+DLH+GD+HL
Sbjct: 709 THPDKLCSSEPSVIFSCVDESGNWGHGGMFDALAKLSSSIPAAYQQASEFRDLHLGDVHL 768
Query: 1437 IRTSEDCD-EKADERTLQWVALAVVQSYNIRRKIPRSNISIPDLETCLSKAAFTAAQNSA 1613
++ E+ D + + T +WVALAVVQSYN RRK+PRS ISIPDLE CLSKA+F AAQNSA
Sbjct: 769 VKIIENTDGQNMEGDTPRWVALAVVQSYNPRRKVPRSEISIPDLEACLSKASFAAAQNSA 828
Query: 1614 SIHMPRIGYQNGSDRSEWYTVERLLRKYASMYGINIFV 1727
SIHMPRIGYQ+G+DRS+WYTVERLLRKYAS++GI I V
Sbjct: 829 SIHMPRIGYQDGTDRSQWYTVERLLRKYASVFGIKIHV 866
>ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1|
helicase, putative [Ricinus communis]
Length = 860
Score = 746 bits (1926), Expect = 0.0
Identities = 390/578 (67%), Positives = 464/578 (80%), Gaps = 3/578 (0%)
Frame = +3
Query: 3 APLVSLQKKVYLSILRKELPKLLAFSSGSSNQPSLQNIVIQLRKACSHPYLFXXXXXXXX 182
APLVSLQK+VY+SILRKELPKLLA SS +SN SLQNIVIQLRKACSHPYLF
Sbjct: 295 APLVSLQKRVYMSILRKELPKLLALSSAASNHQSLQNIVIQLRKACSHPYLFPGIEPEPY 354
Query: 183 XXXXHLVQASGKLIVLDKLLQKLHAAGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGS 362
HLVQASGKLI+LD+LL+KLH +GHRV++FAQMTHTLDILQDFLELRKYSYERLDGS
Sbjct: 355 EEGEHLVQASGKLIILDQLLKKLHGSGHRVIIFAQMTHTLDILQDFLELRKYSYERLDGS 414
Query: 363 IRAEERFAAIRSFSHQPVKSSLDSESNQNSAFVFMISTRAGGVGLNLVAADTVIFYEQDW 542
IRAEERFAAIRSFS Q + +AFVFMISTRAGGVGLNLVAADTVIFYEQDW
Sbjct: 415 IRAEERFAAIRSFSGQAM-----------NAFVFMISTRAGGVGLNLVAADTVIFYEQDW 463
Query: 543 NPQVDKQALQRAHRIGQMNHVLSVNLVTRCTVEEVIIRRAERKLQLSHNVIGENDTDKKG 722
NPQVDKQA+QRAHRIGQMNHVLS+NLVTR TVEEVI+RRAE+KLQLS+NV+G++ ++KG
Sbjct: 464 NPQVDKQAVQRAHRIGQMNHVLSINLVTRHTVEEVIMRRAEKKLQLSNNVLGDDVMEQKG 523
Query: 723 NE-IEVDTGDLRSVIFGLHMFDFTNVNDEDSDEVNMEQLSAMTDRLIEMRNVPSSHTDSK 899
E + V+T DLRS+IFGLH+FD + + E DE+NM +L+AM ++I +R+ D
Sbjct: 524 KEPVGVETVDLRSIIFGLHIFDPSEIITEKPDELNMPELNAMIVKVIGIRDDQGLAKDGG 583
Query: 900 KFEVNPVEFFKGSGFAMTKDSVKNNFDPGLDEESYNSWVEKFKEASKLDDTPTMELGVRR 1079
K++++ V+ KG +S N+DPGLDE SY SWVE+FKEAS+ ++LG RR
Sbjct: 584 KYKLDQVDQKKGFDVVTGGNSAFINYDPGLDEASYLSWVERFKEASQSSGNMVLDLGHRR 643
Query: 1080 SLHEEKHKRLESSRKKTEE-KLQKWEAQGYQSLSVHDPICDIEGHMLLDSGSVQFVYGDC 1256
SL E+KH +LE+++KK EE KL KWE+ GY SLSV DP ++G +L +SG + FV GDC
Sbjct: 644 SLPEDKHLKLEAAKKKAEEKKLNKWESLGYHSLSVKDPEA-VDGDVLSESGFLHFVVGDC 702
Query: 1257 THPSNVCPSEPCIIFSCVDNSGNWGHGGMFDALAKLSPSVPDAYERAFQFKDLHMGDLHL 1436
T P+ VCPSEP +IFSCVDNSGNWGHGGMF+ALAKLS SVP+AYERA +F DL++GDLHL
Sbjct: 703 TEPAKVCPSEPTVIFSCVDNSGNWGHGGMFNALAKLSSSVPNAYERASEFGDLNLGDLHL 762
Query: 1437 IRTSEDCDEKADE-RTLQWVALAVVQSYNIRRKIPRSNISIPDLETCLSKAAFTAAQNSA 1613
IR +ED + ++ E + QWVALAVVQSYN RRK+PRSNISIPDLE LSK +F AAQN A
Sbjct: 763 IRINEDSETQSTEGDSPQWVALAVVQSYNPRRKVPRSNISIPDLEHSLSKVSFVAAQNYA 822
Query: 1614 SIHMPRIGYQNGSDRSEWYTVERLLRKYASMYGINIFV 1727
SIHMPRIGY +G DRS+WYTVERLLRKYAS+YGINI+V
Sbjct: 823 SIHMPRIGYGDGLDRSQWYTVERLLRKYASIYGINIYV 860
>ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Glycine
max]
Length = 1482
Score = 746 bits (1925), Expect = 0.0
Identities = 391/582 (67%), Positives = 450/582 (77%), Gaps = 2/582 (0%)
Frame = +3
Query: 6 PLVSLQKKVYLSILRKELPKLLAFSSGSSNQPSLQNIVIQLRKACSHPYLFXXXXXXXXX 185
PLV LQKKVY+SILRKEL KLLA S G+SN SLQNIVIQLRKACSHPYLF
Sbjct: 901 PLVILQKKVYMSILRKELHKLLALSFGTSNHESLQNIVIQLRKACSHPYLFPGIESEPYE 960
Query: 186 XXXHLVQASGKLIVLDKLLQKLHAAGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSI 365
HLVQASGKL++LD+LLQKLH +GHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSI
Sbjct: 961 EGEHLVQASGKLLILDQLLQKLHYSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSI 1020
Query: 366 RAEERFAAIRSFSHQPVKSSLDSESNQNSAFVFMISTRAGGVGLNLVAADTVIFYEQDWN 545
RAEERFAAIRSFS L+SE++QN AFVF+ISTRAGGVGLNLVAADTVIFYEQDWN
Sbjct: 1021 RAEERFAAIRSFSSSSANMGLNSEADQNEAFVFIISTRAGGVGLNLVAADTVIFYEQDWN 1080
Query: 546 PQVDKQALQRAHRIGQMNHVLSVNLVTRCTVEEVIIRRAERKLQLSHNVIGEND-TDKKG 722
PQVDKQALQRAHRIGQMNHVL +NLVT TVEEVI+RRAERKL LS NVIG+N D
Sbjct: 1081 PQVDKQALQRAHRIGQMNHVLCINLVTERTVEEVIMRRAERKLLLSLNVIGDNILKDDNK 1140
Query: 723 NEIEVDTGDLRSVIFGLHMFDFTNVNDEDSDEVNMEQLSAMTDRLIEMRNVPSSHTDSKK 902
EV +GDL+S+IFGLHMFD T +ND + +N+ ++ AM DR++ MR+ D +K
Sbjct: 1141 EPSEVGSGDLKSIIFGLHMFDPTEINDGNHRNMNIPEICAMADRVLAMRDEQILDNDERK 1200
Query: 903 FEVNPVEFFKGSGFAMTKDSVKNNFDPGLDEESYNSWVEKFKEASKLDDTPTMELGVRRS 1082
FEVNP KG +DS + D GLDE SY SWV+KF+E SK +L RR+
Sbjct: 1201 FEVNPTNILKGDA-VKERDSASLSCDLGLDEASYLSWVKKFEEVSKSSCDSITDLRSRRN 1259
Query: 1083 LHEEKHKRLESSRKKTEE-KLQKWEAQGYQSLSVHDPICDIEGHMLLDSGSVQFVYGDCT 1259
+ EEK ++ES+RKK EE KL +WEA GYQSL+V D I + SGSV FVYGDCT
Sbjct: 1260 VDEEKSLKIESARKKAEEKKLARWEALGYQSLNVKDAISPTGNDIASASGSVHFVYGDCT 1319
Query: 1260 HPSNVCPSEPCIIFSCVDNSGNWGHGGMFDALAKLSPSVPDAYERAFQFKDLHMGDLHLI 1439
PSNVC SEP IIFSCVD SG+WGHGGMFDAL+KLS S+ DAY+ A + DLH+GDLHLI
Sbjct: 1320 APSNVCSSEPAIIFSCVDTSGHWGHGGMFDALSKLSTSIGDAYQWASEHGDLHLGDLHLI 1379
Query: 1440 RTSEDCDEKADERTLQWVALAVVQSYNIRRKIPRSNISIPDLETCLSKAAFTAAQNSASI 1619
R + C E+ D + VALAVVQSYN R KI RS IS+P LE+ L+KAA++AAQNSASI
Sbjct: 1380 RLDDCCGEQMDGNAPKMVALAVVQSYNPRHKIRRSEISLPHLESSLTKAAYSAAQNSASI 1439
Query: 1620 HMPRIGYQNGSDRSEWYTVERLLRKYASMYGINIFVYYFRRA 1745
HMPRIGYQ+GSDRSEWYT+ERLLRKYAS+Y INI+VYY+RR+
Sbjct: 1440 HMPRIGYQDGSDRSEWYTIERLLRKYASIYNINIYVYYYRRS 1481
>ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Cucumis
sativus]
Length = 868
Score = 736 bits (1899), Expect = 0.0
Identities = 386/586 (65%), Positives = 457/586 (77%), Gaps = 5/586 (0%)
Frame = +3
Query: 6 PLVSLQKKVYLSILRKELPKLLAFSSGSSNQPSLQNIVIQLRKACSHPYLFXXXXXXXXX 185
PLV+LQ+KVY+S+LRKELPKLLA S+GSSN SLQNIVIQLRKACSHPYLF
Sbjct: 294 PLVNLQRKVYMSLLRKELPKLLAVSAGSSNHQSLQNIVIQLRKACSHPYLFPGIEPEPYE 353
Query: 186 XXXHLVQASGKLIVLDKLLQKLHAAGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSI 365
HLVQASGKL+VLD+LLQKLH + HRVLLFAQMTHTLDILQDFLELR +SYERLDGSI
Sbjct: 354 EGEHLVQASGKLVVLDQLLQKLHESQHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSI 413
Query: 366 RAEERFAAIRSFSHQPVKSSLDSESNQNSAFVFMISTRAGGVGLNLVAADTVIFYEQDWN 545
RAEERFAAIRSFS V S S++ +N AFVF+ISTRAGGVGLNLV+ADTVIFYEQDWN
Sbjct: 414 RAEERFAAIRSFSSNSVGGS--SQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWN 471
Query: 546 PQVDKQALQRAHRIGQMNHVLSVNLVTRCTVEEVIIRRAERKLQLSHNVIGENDTDKKGN 725
PQVDKQALQRAHRIGQ+NHVLS+NLVT TVEEVI+RRAERKLQLS V+GE+ D+
Sbjct: 472 PQVDKQALQRAHRIGQINHVLSINLVTSQTVEEVIMRRAERKLQLSQKVVGEDYIDQDAE 531
Query: 726 EIEV-DTGDLRSVIFGLHMFDFTNVNDEDSDEVNMEQLSAMTDRLIEMRNVPSSHTDSKK 902
+I + +T DLRS+IFGLH+FD V++E S E + +SAM +++I +R+ S+ D +
Sbjct: 532 DIAMNETSDLRSIIFGLHVFDQDQVDNEKSGEFEVSNVSAMAEKVIALRHKKLSNKDDTR 591
Query: 903 FEVNPVEFFKGSGFAMTKDSVKNNFDPGLDEESYNSWVEKFKEASKLDDTPTMELGVRRS 1082
F VNP F G + NFDPGLDE SY SW+EKFKEA+ EL R++
Sbjct: 592 FLVNPTTFSNG--------TTSLNFDPGLDEVSYRSWIEKFKEATP-GANQIKELEDRKT 642
Query: 1083 LHEEKHKRLESSRKKTEE-KLQKWEAQGYQSLSVHDPICDIEGHMLLDSGSVQFVYGDCT 1259
L +K +L++++KK EE KL KWEA GY SLSV DPI +G ++ D+GSV FVYGDCT
Sbjct: 643 LSRDKSLKLQAAKKKAEEKKLSKWEALGYHSLSVEDPILPNDGDLISDAGSVYFVYGDCT 702
Query: 1260 HPSNV--CPSEPCIIFSCVDNSGNWGHGGMFDALAKLSPSVPDAYERAFQFKDLHMGDLH 1433
HPS C SEP IIFSCVD+SG+WGHGGMF ALAKLS SVP AYERA +F DLH+GDLH
Sbjct: 703 HPSATVNCISEPTIIFSCVDDSGSWGHGGMFGALAKLSESVPSAYERASEFGDLHLGDLH 762
Query: 1434 LIRTSEDCDEKA-DERTLQWVALAVVQSYNIRRKIPRSNISIPDLETCLSKAAFTAAQNS 1610
LI+ E++ + QWVALAVVQSYN RRK+PRS IS+PDLE C+SKA+ +AA++S
Sbjct: 763 LIKLGIISKEQSTSDNAPQWVALAVVQSYNPRRKVPRSKISLPDLENCISKASSSAAKHS 822
Query: 1611 ASIHMPRIGYQNGSDRSEWYTVERLLRKYASMYGINIFVYYFRRAS 1748
ASIHMPRIGYQ+GSDRSEWYTVERLLRKYAS+Y + I+VYY+RR S
Sbjct: 823 ASIHMPRIGYQDGSDRSEWYTVERLLRKYASIYNVKIYVYYYRRTS 868