BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012982
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603237.1| DNA topoisomerase 2-binding protein [Medicag...    60   1e-07
ref|XP_003523658.1| PREDICTED: uncharacterized protein LOC100807...    59   5e-07
ref|XP_003527763.1| PREDICTED: uncharacterized protein LOC100815...    58   7e-07
ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|22354...    58   7e-07
ref|XP_002878952.1| hypothetical protein ARALYDRAFT_320417 [Arab...    57   1e-06

>ref|XP_003603237.1| DNA topoisomerase 2-binding protein [Medicago truncatula]
           gi|355492285|gb|AES73488.1| DNA topoisomerase 2-binding
           protein [Medicago truncatula]
          Length = 570

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = -3

Query: 327 GGRKFEHVLKHGLRNGHYVVTLGWFVDSVTKN 232
           GGRKFEH LKHG +NG +VVTLGWFVDSV KN
Sbjct: 99  GGRKFEHALKHGTKNGLFVVTLGWFVDSVRKN 130


>ref|XP_003523658.1| PREDICTED: uncharacterized protein LOC100807358 [Glycine max]
          Length = 542

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -3

Query: 327 GGRKFEHVLKHGLRNGHYVVTLGWFVDSVTKN 232
           GGRKFEH LKHG +NG +VVTLGWFVDSV K+
Sbjct: 100 GGRKFEHALKHGAKNGLFVVTLGWFVDSVRKS 131


>ref|XP_003527763.1| PREDICTED: uncharacterized protein LOC100815253 [Glycine max]
          Length = 541

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = -3

Query: 327 GGRKFEHVLKHGLRNGHYVVTLGWFVDSVTK 235
           GGRKFEH LKHG +NG +VVTLGWFVDSV K
Sbjct: 99  GGRKFEHALKHGAKNGLFVVTLGWFVDSVRK 129


>ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|223544647|gb|EEF46163.1|
           topbp1, putative [Ricinus communis]
          Length = 556

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -3

Query: 327 GGRKFEHVLKHGLRNGHYVVTLGWFVDSVTKN 232
           GGRKFEH LKHG +NG +VVT+GWFVDSV +N
Sbjct: 114 GGRKFEHALKHGSKNGLFVVTIGWFVDSVRRN 145


>ref|XP_002878952.1| hypothetical protein ARALYDRAFT_320417 [Arabidopsis lyrata subsp.
           lyrata] gi|297324791|gb|EFH55211.1| hypothetical protein
           ARALYDRAFT_320417 [Arabidopsis lyrata subsp. lyrata]
          Length = 444

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -3

Query: 324 GRKFEHVLKHGLRNGHYVVTLGWFVDSVTKN 232
           GRKFEH LKHG RNG +VVT+GWFVDSV +N
Sbjct: 6   GRKFEHTLKHGTRNGLFVVTIGWFVDSVKRN 36