BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012979
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine...    60   2e-07
ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    59   4e-07
ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus ...    58   7e-07
ref|XP_003619648.1| F-box/kelch-repeat protein [Medicago truncat...    58   7e-07

>ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 382

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = -3

Query: 311 GFGYVPSLDDYKVVKAMQYSDGNEFV-GSEFEVYSLEKDSWRKVDGAPYYICGGNSL--F 141
           GFG+ P  +DYK++    + D ++    S+ ++Y+L+ DSW+ +   PY +C   ++  F
Sbjct: 138 GFGHHPPSNDYKLLSITYFVDLHKRTFDSQVQLYTLKSDSWKNLPSMPYALCCARTMGVF 197

Query: 140 GFENPHWLAMTGRWTFESKCIVYFDLLEEKFCEIQHPDCVS 18
              + HWL        E   IV FDL  E FCE+  P  V+
Sbjct: 198 VSGSLHWLVTRKLQPDEPDLIVAFDLTSETFCEVPLPATVN 238


>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 20/115 (17%)
 Frame = -3

Query: 311 GFGYVPSLDDYKVVKAMQY------SDGNEFVGSEFEV--YSLEKDSWRKVDGAP----- 171
           GFGY    DDYKVV+  Q+       DG   +G E+EV  YSL+ D W+K++G P     
Sbjct: 141 GFGYDSYGDDYKVVRMAQFVREDGGGDGGG-LGCEYEVKVYSLKNDKWKKIEGLPIRLRL 199

Query: 170 -----YYICG--GNSLFGFENPHWLAMTGRWTFESKCIVYFDLLEEKFCEIQHPD 27
                ++I    G  +F     HW+    R      C++ FD+ ++KF E+  PD
Sbjct: 200 LSKPFFHILNRRGYGVFAGHALHWIVPQRRELGIRDCVLGFDIRDDKFFELPQPD 254


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
 Frame = -3

Query: 311 GFGYVPSLDDYKVVKAMQYSDGNE-FVGSEFEVYSLEKDSWRKVDGAPY--YICGGNSLF 141
           GFGY    DDYK+V+  Q+  G +    SE +VYSL K SWR++   PY  +  G N +F
Sbjct: 150 GFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVF 209

Query: 140 GFENPHWLAMTGRWTFESKCIVYFDLLEEKFCEIQHPD 27
                HW+      +  +  +V  DL  E + E+  P+
Sbjct: 210 ANGALHWVVGENPESNVANIVVALDLGVEDYREVLQPE 247


>ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223543895|gb|EEF45421.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
 Frame = -3

Query: 311 GFGYVPSLDDYKVVKAMQYSDGNEFVGSEFEVYSLEKDSWRKVDGAPYYICG---GNSLF 141
           GFGY  S++DYK+VK           G  F VYS++++SWR V G PY I     G  L 
Sbjct: 150 GFGYAHSINDYKLVKI-------SCRGCVF-VYSVKENSWRSVGGFPYSILALDPGIQLN 201

Query: 140 GFENPHWLAMTGRWTFESKCIVYFDLLEEKFCEIQHPDCVSN 15
           G    HW+    + + +S+ I  FDL+EEKF ++  P  V N
Sbjct: 202 GAI--HWVVSRSKDSTKSQIIGAFDLVEEKFWDVPPPVSVHN 241


>ref|XP_003619648.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355494663|gb|AES75866.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 373

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
 Frame = -3

Query: 311 GFGYVPSLDDYKVVKAMQYSDGNEFVGSEFEVYSLEKDSWRKVDGA--PYYICGGNSLFG 138
           GFGY PS DDY VV     +D + F  S+ E +SL  + W++++G   PY      S+ G
Sbjct: 158 GFGYDPSTDDYLVVVVSCDTDFHNF-SSQLEFFSLRDNRWKEIEGTPFPYMNTSDYSMVG 216

Query: 137 --FENP-HWLAMTGRWTFESKCIVYFDLLEEKFCEIQHPD 27
             F    HWLA   R     K I+ FDL+E K  ++  PD
Sbjct: 217 SVFNGAIHWLAF--RHDLSMKVIIAFDLIERKLFDMSLPD 254