BLASTX nr result

ID: Coptis21_contig00012967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012967
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264658.2| PREDICTED: probable leucine-rich repeat rece...   156   2e-36
emb|CBI31129.3| unnamed protein product [Vitis vinifera]              156   2e-36
emb|CAQ58615.1| ATP binding / kinase/ protein serine / threonine...   156   2e-36
ref|XP_002519985.1| receptor protein kinase, putative [Ricinus c...   140   1e-31
ref|XP_003547844.1| PREDICTED: probable leucine-rich repeat rece...   138   5e-31

>ref|XP_002264658.2| PREDICTED: probable leucine-rich repeat receptor-like protein kinase
            At5g49770 [Vitis vinifera]
          Length = 1043

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/124 (61%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
 Frame = +3

Query: 3    VRTRLDKNDKQHYGLTELMDPTIRNETNLIGFVRFIELAMQCVEEAAADRPTMSDLVKEI 182
            VR  +DKND++HYGL E+MDP IRN TNLIGF +F+ELAMQCVEE+A DRPTMSD+VK I
Sbjct: 919  VRMAMDKNDEEHYGLREIMDPAIRNVTNLIGFRKFLELAMQCVEESAGDRPTMSDVVKTI 978

Query: 183  ETILHNDGL-XXXXXXXXXXXXDFTNLKSTHTHPYNDVLPKKEGNTTDSFDYSGGYTLSA 359
            ET+L NDG+             +F   K    HPYND LP+KE N +D+FDYSGGYTLS 
Sbjct: 979  ETVLQNDGMNTNSTTSASSSATEFGASKGVPRHPYNDSLPRKEVNDSDAFDYSGGYTLST 1038

Query: 360  KIEP 371
            K+EP
Sbjct: 1039 KVEP 1042


>emb|CBI31129.3| unnamed protein product [Vitis vinifera]
          Length = 950

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/124 (61%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
 Frame = +3

Query: 3    VRTRLDKNDKQHYGLTELMDPTIRNETNLIGFVRFIELAMQCVEEAAADRPTMSDLVKEI 182
            VR  +DKND++HYGL E+MDP IRN TNLIGF +F+ELAMQCVEE+A DRPTMSD+VK I
Sbjct: 826  VRMAMDKNDEEHYGLREIMDPAIRNVTNLIGFRKFLELAMQCVEESAGDRPTMSDVVKTI 885

Query: 183  ETILHNDGL-XXXXXXXXXXXXDFTNLKSTHTHPYNDVLPKKEGNTTDSFDYSGGYTLSA 359
            ET+L NDG+             +F   K    HPYND LP+KE N +D+FDYSGGYTLS 
Sbjct: 886  ETVLQNDGMNTNSTTSASSSATEFGASKGVPRHPYNDSLPRKEVNDSDAFDYSGGYTLST 945

Query: 360  KIEP 371
            K+EP
Sbjct: 946  KVEP 949


>emb|CAQ58615.1| ATP binding / kinase/ protein serine / threonine kinase [Vitis
            vinifera]
          Length = 946

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/124 (61%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
 Frame = +3

Query: 3    VRTRLDKNDKQHYGLTELMDPTIRNETNLIGFVRFIELAMQCVEEAAADRPTMSDLVKEI 182
            VR  +DKND++HYGL E+MDP IRN TNLIGF +F+ELAMQCVEE+A DRPTMSD+VK I
Sbjct: 822  VRMAMDKNDEEHYGLREIMDPAIRNVTNLIGFRKFLELAMQCVEESAGDRPTMSDVVKTI 881

Query: 183  ETILHNDGL-XXXXXXXXXXXXDFTNLKSTHTHPYNDVLPKKEGNTTDSFDYSGGYTLSA 359
            ET+L NDG+             +F   K    HPYND LP+KE N +D+FDYSGGYTLS 
Sbjct: 882  ETVLQNDGMNTNSTTSASSSATEFGASKGVPRHPYNDSLPRKEVNDSDAFDYSGGYTLST 941

Query: 360  KIEP 371
            K+EP
Sbjct: 942  KVEP 945


>ref|XP_002519985.1| receptor protein kinase, putative [Ricinus communis]
            gi|223540749|gb|EEF42309.1| receptor protein kinase,
            putative [Ricinus communis]
          Length = 988

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/140 (50%), Positives = 90/140 (64%), Gaps = 17/140 (12%)
 Frame = +3

Query: 3    VRTRLDKNDKQHYGLTELMDPTIRNETNLIGFVRFIELAMQCVEEAAADRPTMSDLVKEI 182
            VR  +D+ND++HYGL E MDP IRN  NL+GF +F+ELAMQCVEE+AA+RPTM ++VK I
Sbjct: 848  VRMAMDRNDEEHYGLKETMDPVIRNAGNLVGFEKFLELAMQCVEESAAERPTMGEVVKAI 907

Query: 183  ETILHNDGLXXXXXXXXXXXXDFTNLKSTHTHPY-----------------NDVLPKKEG 311
            ETIL NDG+            DF   ++T  HPY                 ND LPKK+ 
Sbjct: 908  ETILQNDGMNTNSTSASSSATDFGASRNTSRHPYNNNNNNNNNNNNNNNNNNDHLPKKDV 967

Query: 312  NTTDSFDYSGGYTLSAKIEP 371
            N  ++FDYSGGY+L AK+EP
Sbjct: 968  NDFNAFDYSGGYSLPAKVEP 987


>ref|XP_003547844.1| PREDICTED: probable leucine-rich repeat receptor-like protein kinase
            At5g49770-like [Glycine max]
          Length = 967

 Score =  138 bits (348), Expect = 5e-31
 Identities = 71/127 (55%), Positives = 85/127 (66%), Gaps = 4/127 (3%)
 Frame = +3

Query: 3    VRTRLDKNDKQHYGLTELMDPTIRNETNLIGFVRFIELAMQCVEEAAADRPTMSDLVKEI 182
            VRT ++K D++HYGL ELMDP +RN  NLIGF RF+ELA+QCVEE+A DRPTMS++VK +
Sbjct: 840  VRTLMNKKDEEHYGLRELMDPVVRNTPNLIGFGRFLELAIQCVEESATDRPTMSEVVKAL 899

Query: 183  ETILHNDGLXXXXXXXXXXXXDFTNLKSTHTHPYNDVLPKKEGNTTDS----FDYSGGYT 350
            ETIL NDG+            DF   K    HPY D    K+ N  DS    FDYSGGYT
Sbjct: 900  ETILQNDGMNTNSTSASSSATDFGVGKGGMRHPYIDCTFTKKDNANDSSSSAFDYSGGYT 959

Query: 351  LSAKIEP 371
            LS K+EP
Sbjct: 960  LSTKVEP 966


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