BLASTX nr result

ID: Coptis21_contig00012959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012959
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI41059.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002271511.2| PREDICTED: homeobox-leucine zipper protein H...    92   4e-17
ref|XP_002510028.1| homeobox protein, putative [Ricinus communis...    87   1e-15
ref|XP_002302378.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
emb|CBI19344.3| unnamed protein product [Vitis vinifera]               83   2e-14

>emb|CBI41059.3| unnamed protein product [Vitis vinifera]
          Length = 266

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 56/112 (50%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
 Frame = -1

Query: 334 ENSDSDVHPQISPHTPMSSFSNASIKRERDPAGXXXXXXXXXXXXXXXXXXEGXXXXXXX 155
           E + +D++ Q SPH+ +SSFSNAS+KRERD                              
Sbjct: 67  EEAAADLYRQPSPHSTVSSFSNASVKRERDLGSEEVEIERLSSRV--------------- 111

Query: 154 XXXXXXXXXSDEDEEGS-GRKKLRLTKEQSALLEESFKEHTTLNPKQKQTLA 2
                    SDEDE+GS GRKKLRLTKEQSALLEESFK+H+TLNPKQKQ LA
Sbjct: 112 ---------SDEDEDGSNGRKKLRLTKEQSALLEESFKQHSTLNPKQKQALA 154


>ref|XP_002271511.2| PREDICTED: homeobox-leucine zipper protein HAT22 [Vitis vinifera]
           gi|147778182|emb|CAN60988.1| hypothetical protein
           VITISV_022980 [Vitis vinifera]
          Length = 283

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 56/112 (50%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
 Frame = -1

Query: 334 ENSDSDVHPQISPHTPMSSFSNASIKRERDPAGXXXXXXXXXXXXXXXXXXEGXXXXXXX 155
           E + +D++ Q SPH+ +SSFSNAS+KRERD                              
Sbjct: 84  EEAAADLYRQPSPHSTVSSFSNASVKRERDLGSEEVEIERLSSRV--------------- 128

Query: 154 XXXXXXXXXSDEDEEGS-GRKKLRLTKEQSALLEESFKEHTTLNPKQKQTLA 2
                    SDEDE+GS GRKKLRLTKEQSALLEESFK+H+TLNPKQKQ LA
Sbjct: 129 ---------SDEDEDGSNGRKKLRLTKEQSALLEESFKQHSTLNPKQKQALA 171


>ref|XP_002510028.1| homeobox protein, putative [Ricinus communis]
           gi|223550729|gb|EEF52215.1| homeobox protein, putative
           [Ricinus communis]
          Length = 274

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 50/108 (46%), Positives = 62/108 (57%)
 Frame = -1

Query: 325 DSDVHPQISPHTPMSSFSNASIKRERDPAGXXXXXXXXXXXXXXXXXXEGXXXXXXXXXX 146
           + D+ PQ S  + +SSFSN+S+K+ERD  G                              
Sbjct: 71  EPDLQPQASSPSAVSSFSNSSVKKERDSGGGGGGEEVDGERVSSRV-------------- 116

Query: 145 XXXXXXSDEDEEGSGRKKLRLTKEQSALLEESFKEHTTLNPKQKQTLA 2
                 SDEDEEGS RKKLRLTK+QSA+LE++FKEH+TLNPKQKQ LA
Sbjct: 117 ------SDEDEEGSPRKKLRLTKQQSAILEDNFKEHSTLNPKQKQALA 158


>ref|XP_002302378.1| predicted protein [Populus trichocarpa] gi|222844104|gb|EEE81651.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 49/111 (44%), Positives = 63/111 (56%)
 Frame = -1

Query: 334 ENSDSDVHPQISPHTPMSSFSNASIKRERDPAGXXXXXXXXXXXXXXXXXXEGXXXXXXX 155
           + +D+D+ PQ S  + +SSFSN+SIK+ER+                              
Sbjct: 69  KKTDADLQPQASSLSAVSSFSNSSIKKERE-----------------------FGIGEEV 105

Query: 154 XXXXXXXXXSDEDEEGSGRKKLRLTKEQSALLEESFKEHTTLNPKQKQTLA 2
                    SDEDEEGS RKKLRLTKEQS +LE++FK+H+TLNPKQKQ LA
Sbjct: 106 DVERISSRLSDEDEEGSPRKKLRLTKEQSVILEDNFKDHSTLNPKQKQVLA 156


>emb|CBI19344.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/107 (44%), Positives = 61/107 (57%)
 Frame = -1

Query: 322 SDVHPQISPHTPMSSFSNASIKRERDPAGXXXXXXXXXXXXXXXXXXEGXXXXXXXXXXX 143
           +D+H Q S  + +SSFSN+SIK+ERD  G                               
Sbjct: 73  TDLHRQASSLSAVSSFSNSSIKKERDLCGEVEVEVEIERVSSRA---------------- 116

Query: 142 XXXXXSDEDEEGSGRKKLRLTKEQSALLEESFKEHTTLNPKQKQTLA 2
                SDEDEEG+ RKKLRLTKEQ+ +LE+SFK+H+TLNP+QKQ LA
Sbjct: 117 -----SDEDEEGNSRKKLRLTKEQAVILEDSFKQHSTLNPRQKQVLA 158


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