BLASTX nr result

ID: Coptis21_contig00012951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012951
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525448.1| TATA-box binding protein, putative [Ricinus ...   215   3e-54
ref|XP_004144066.1| PREDICTED: TATA-box-binding protein-like [Cu...   213   2e-53
gb|AAD10238.1| TATA-box binding protein [Phaseolus vulgaris]          213   2e-53
gb|AAD10237.1| TATA-box binding protein [Phaseolus vulgaris]          213   2e-53
gb|AAT42173.1| TATA sequence-binding protein 2 (TBP-2) [Zea mays...   213   2e-53

>ref|XP_002525448.1| TATA-box binding protein, putative [Ricinus communis]
           gi|223535261|gb|EEF36938.1| TATA-box binding protein,
           putative [Ricinus communis]
          Length = 201

 Score =  215 bits (547), Expect = 3e-54
 Identities = 108/108 (100%), Positives = 108/108 (100%)
 Frame = -2

Query: 324 DCKLDLKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA 145
           DCKLDLKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA
Sbjct: 36  DCKLDLKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA 95

Query: 144 RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 1
           RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS
Sbjct: 96  RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 143


>ref|XP_004144066.1| PREDICTED: TATA-box-binding protein-like [Cucumis sativus]
           gi|449493574|ref|XP_004159356.1| PREDICTED:
           TATA-box-binding protein-like [Cucumis sativus]
          Length = 200

 Score =  213 bits (541), Expect = 2e-53
 Identities = 107/108 (99%), Positives = 107/108 (99%)
 Frame = -2

Query: 324 DCKLDLKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA 145
           DCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA
Sbjct: 35  DCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA 94

Query: 144 RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 1
           RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS
Sbjct: 95  RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 142


>gb|AAD10238.1| TATA-box binding protein [Phaseolus vulgaris]
          Length = 200

 Score =  213 bits (541), Expect = 2e-53
 Identities = 107/108 (99%), Positives = 107/108 (99%)
 Frame = -2

Query: 324 DCKLDLKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA 145
           DCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA
Sbjct: 35  DCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA 94

Query: 144 RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 1
           RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS
Sbjct: 95  RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 142


>gb|AAD10237.1| TATA-box binding protein [Phaseolus vulgaris]
          Length = 200

 Score =  213 bits (541), Expect = 2e-53
 Identities = 107/108 (99%), Positives = 107/108 (99%)
 Frame = -2

Query: 324 DCKLDLKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA 145
           DCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA
Sbjct: 35  DCKLDLKTIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA 94

Query: 144 RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 1
           RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS
Sbjct: 95  RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 142


>gb|AAT42173.1| TATA sequence-binding protein 2 (TBP-2) [Zea mays]
           gi|413933541|gb|AFW68092.1| TATA-binding protein2 [Zea
           mays]
          Length = 392

 Score =  213 bits (541), Expect = 2e-53
 Identities = 107/108 (99%), Positives = 107/108 (99%)
 Frame = -2

Query: 324 DCKLDLKQIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA 145
           DCKLDLK IALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA
Sbjct: 182 DCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAA 241

Query: 144 RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 1
           RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS
Sbjct: 242 RKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSS 289


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