BLASTX nr result

ID: Coptis21_contig00012929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012929
         (1360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270341.1| PREDICTED: probable plastid-lipid-associated...   269   1e-69
ref|XP_002515135.1| structural molecule, putative [Ricinus commu...   263   1e-67
gb|ABD39695.1| fibrillin 8 [Coffea canephora]                         261   2e-67
gb|AFK43507.1| unknown [Lotus japonicus]                              261   3e-67
ref|NP_566091.1| putative plastid-lipid-associated protein 10 [A...   261   3e-67

>ref|XP_002270341.1| PREDICTED: probable plastid-lipid-associated protein 10,
           chloroplastic [Vitis vinifera]
           gi|296089046|emb|CBI38749.3| unnamed protein product
           [Vitis vinifera]
          Length = 278

 Score =  269 bits (688), Expect = 1e-69
 Identities = 151/247 (61%), Positives = 169/247 (68%)
 Frame = +1

Query: 157 KPFLCLSAVATPKDTSTAANESXXXXXXXXXXXXXXXIQDTKRGFVTTLDQRSSIEQALV 336
           K F CL+A ATP  T+ AA                  IQDT+RG V T DQRS IE+ALV
Sbjct: 38  KMFPCLAATATP--TTQAAE----FVLEEKKHDLLRAIQDTQRGLVATADQRSCIEEALV 91

Query: 337 CVEKYDAGTSIDLNKLDGTWRLQYTSAPDVLVLFDSAARFPFFQVGQIFQKFECRDQSDG 516
            VE+Y+AG  IDL KLDGTWRLQYTSAPDVLVL +SAARF FFQVGQIFQKFEC++QS  
Sbjct: 92  NVEEYNAGVPIDLGKLDGTWRLQYTSAPDVLVLLESAARFSFFQVGQIFQKFECQNQSKE 151

Query: 517 GIVRNVVRWSIPXXXXXXXXXXXXVSANFSVISKRNIYLQFEEISVQDIKINEDLQALIA 696
           G+VRNVVRWSIP            VSA FSV+S RNIYLQFEEIS+Q I I+E+LQALIA
Sbjct: 152 GVVRNVVRWSIPPLLEEQEGATLLVSAKFSVVSARNIYLQFEEISIQSINISEELQALIA 211

Query: 697 PALLPRXXXXXXXXXXXXTFKARVPVTSPGRQSAGGLYYLSYLDGNMLLGRAXXXXXXXX 876
           PA+LPR            TFKA +PV + GR+S GGLYYLSYLD NMLLGRA        
Sbjct: 212 PAILPRSFLSLQILQFIRTFKAEIPVRNQGRRSVGGLYYLSYLDANMLLGRA-AAGGIFV 270

Query: 877 XTRAQPL 897
            TRAQPL
Sbjct: 271 FTRAQPL 277


>ref|XP_002515135.1| structural molecule, putative [Ricinus communis]
           gi|223545615|gb|EEF47119.1| structural molecule,
           putative [Ricinus communis]
          Length = 285

 Score =  263 bits (671), Expect = 1e-67
 Identities = 147/256 (57%), Positives = 171/256 (66%), Gaps = 3/256 (1%)
 Frame = +1

Query: 139 VSFHKNKPFLCLSAVATPKDTSTAANESXXXXXXXXXXXXXXXIQDTKRGFVTTLDQRSS 318
           VSF +NK F C + VAT K T  +  E                IQDT+RG V T DQRS 
Sbjct: 35  VSF-QNK-FSCSATVATDKMTPVSEFE-----IEKKKHDVLTAIQDTQRGLVATADQRSI 87

Query: 319 IEQALVCVEKYDAGTSIDLNKLDGTWRLQYTSAPDVLVLFDSAARFPFFQVGQIFQKFEC 498
           IE ALV +E Y+ G  IDL KLDGTWRLQYTSAPDVL+L +S+AR PF QVGQIFQKFEC
Sbjct: 88  IEDALVSLEGYNVGAPIDLVKLDGTWRLQYTSAPDVLILLESSARLPFLQVGQIFQKFEC 147

Query: 499 RDQSDGGIVRNVVRWSIPXXXXXXXXXXXXVSANFSVISKRNIYLQFEEISVQDIKINED 678
           RDQS GGI+RNVVRWSIP            VSA F V+S RNIYLQFEEIS+Q+IKI+E+
Sbjct: 148 RDQSSGGIIRNVVRWSIPTVFEEQDGATLLVSAKFDVVSARNIYLQFEEISIQNIKISEE 207

Query: 679 LQALIAPALLPRXXXXXXXXXXXXTFKARVPVT---SPGRQSAGGLYYLSYLDGNMLLGR 849
           +QALIAPA+LPR             FKA++PV    +PGR++ GGLYYLSYLD NM+LGR
Sbjct: 208 VQALIAPAILPRSFFSLQILQFIRAFKAQIPVRNPGNPGRRAVGGLYYLSYLDNNMILGR 267

Query: 850 AXXXXXXXXXTRAQPL 897
           A         T+AQPL
Sbjct: 268 AVGGGGIFVFTKAQPL 283


>gb|ABD39695.1| fibrillin 8 [Coffea canephora]
          Length = 279

 Score =  261 bits (668), Expect = 2e-67
 Identities = 132/210 (62%), Positives = 154/210 (73%)
 Frame = +1

Query: 268 IQDTKRGFVTTLDQRSSIEQALVCVEKYDAGTSIDLNKLDGTWRLQYTSAPDVLVLFDSA 447
           IQDT+RG VTT DQRSSIE+ALV VE +DAG +IDL +LDGTWRLQYTSAPDVL+LF+SA
Sbjct: 68  IQDTQRGLVTTADQRSSIEEALVSVEAFDAGEAIDLGELDGTWRLQYTSAPDVLILFESA 127

Query: 448 ARFPFFQVGQIFQKFECRDQSDGGIVRNVVRWSIPXXXXXXXXXXXXVSANFSVISKRNI 627
           +R PFFQVGQ+FQKFEC+D+S+GG+VRN+V+WSIP            VSA FSV+S RNI
Sbjct: 128 SRLPFFQVGQVFQKFECQDESNGGVVRNIVKWSIPSLLEEQEGATLLVSAKFSVVSSRNI 187

Query: 628 YLQFEEISVQDIKINEDLQALIAPALLPRXXXXXXXXXXXXTFKARVPVTSPGRQSAGGL 807
           Y QFEEI+   I I+E+LQALIAPA+LPR             FKA  PV +PGR S GGL
Sbjct: 188 YFQFEEIAFNKINISEELQALIAPAILPRSFISLQILQFIRAFKAEFPVRNPGRNSVGGL 247

Query: 808 YYLSYLDGNMLLGRAXXXXXXXXXTRAQPL 897
           YYLSYLD  MLLGRA         TRAQ +
Sbjct: 248 YYLSYLDRYMLLGRAVGGGGVFVFTRAQAI 277


>gb|AFK43507.1| unknown [Lotus japonicus]
          Length = 271

 Score =  261 bits (667), Expect = 3e-67
 Identities = 136/210 (64%), Positives = 155/210 (73%)
 Frame = +1

Query: 268 IQDTKRGFVTTLDQRSSIEQALVCVEKYDAGTSIDLNKLDGTWRLQYTSAPDVLVLFDSA 447
           IQDT+RG +TT DQR SIE+ALV VE  + G  I+LNKLDGTWRLQYTSA DVLVLF++A
Sbjct: 61  IQDTQRGLLTTPDQRFSIEEALVNVEGCNKGDPINLNKLDGTWRLQYTSAFDVLVLFEAA 120

Query: 448 ARFPFFQVGQIFQKFECRDQSDGGIVRNVVRWSIPXXXXXXXXXXXXVSANFSVISKRNI 627
           AR PFFQVGQIFQKFECRD+S+GG++RNVVRWS+P            VSA F+V+S RNI
Sbjct: 121 ARLPFFQVGQIFQKFECRDESNGGVIRNVVRWSVPNLLEEQDGATLLVSAKFTVVSVRNI 180

Query: 628 YLQFEEISVQDIKINEDLQALIAPALLPRXXXXXXXXXXXXTFKARVPVTSPGRQSAGGL 807
           Y QF+EI++QDI INE LQALIAPALLPR             FKA++PV  PGRQS GGL
Sbjct: 181 YPQFQEITLQDININEQLQALIAPALLPRSYLSLQILQFLRAFKAQIPVRDPGRQSVGGL 240

Query: 808 YYLSYLDGNMLLGRAXXXXXXXXXTRAQPL 897
           YYLSYLD NMLLGRA         TRAQ L
Sbjct: 241 YYLSYLDDNMLLGRAVGGGGVFVFTRAQSL 270


>ref|NP_566091.1| putative plastid-lipid-associated protein 10 [Arabidopsis thaliana]
           gi|75162466|sp|Q8W4F1.1|PAP10_ARATH RecName:
           Full=Probable plastid-lipid-associated protein 10,
           chloroplastic; AltName: Full=Fibrillin-10; Flags:
           Precursor gi|17065042|gb|AAL32675.1| Unknown protein
           [Arabidopsis thaliana] gi|20197139|gb|AAC34229.2|
           Expressed protein [Arabidopsis thaliana]
           gi|20259994|gb|AAM13344.1| unknown protein [Arabidopsis
           thaliana] gi|330255676|gb|AEC10770.1| putative
           plastid-lipid-associated protein 10 [Arabidopsis
           thaliana]
          Length = 284

 Score =  261 bits (667), Expect = 3e-67
 Identities = 143/265 (53%), Positives = 175/265 (66%), Gaps = 2/265 (0%)
 Frame = +1

Query: 112 QIAPAHFNKVSFHKNKPFLCLSAVATPKDTSTAANESXXXXXXXXXXXXXXXIQDTKRGF 291
           +I+P   N  + H+ K F C  AVA+  +TS                     +QDT+RG 
Sbjct: 21  RISPFGLNIKTNHR-KRFSCRVAVASG-ETSARVVVDNELDLEHKKHDLLRAVQDTQRGL 78

Query: 292 VTTLDQRSSIEQALVCVEKYDAGTSIDLNKLDGTWRLQYTSAPDVLVLFDSAARFPFFQV 471
             T DQRS IE+ALV VE ++ G  ID  KLDGTWRLQYTSAPDV+VLF++A+R PFFQV
Sbjct: 79  TATSDQRSIIEEALVTVEGFNGGEEIDPVKLDGTWRLQYTSAPDVVVLFEAASRLPFFQV 138

Query: 472 GQIFQKFECRDQSDGGIVRNVVRWSIPXXXXXXXXXXXXVSANFSVISKRNIYLQFEEIS 651
           GQ+FQKFECRD+SDGGI+RNVV+WS+P            V+A F  +S RNIYLQFEEIS
Sbjct: 139 GQVFQKFECRDRSDGGIIRNVVQWSLPSLLEEQEGATLVVTAKFDKVSSRNIYLQFEEIS 198

Query: 652 VQDIKINEDLQALIAPALLPRXXXXXXXXXXXXTFKARVPV--TSPGRQSAGGLYYLSYL 825
           V++I INE LQALIAPA+LPR            TFKA++PV  TSPGR+S GGLYYLSYL
Sbjct: 199 VRNININEQLQALIAPAILPRSFLSLQLLQFIRTFKAQIPVNATSPGRRSVGGLYYLSYL 258

Query: 826 DGNMLLGRAXXXXXXXXXTRAQPLQ 900
           D NMLLGR+         T++QPL+
Sbjct: 259 DNNMLLGRSVGGGGVFVFTKSQPLE 283


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