BLASTX nr result

ID: Coptis21_contig00012927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012927
         (1451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531855.1| conserved hypothetical protein [Ricinus comm...   261   3e-67
ref|XP_002283688.1| PREDICTED: uncharacterized protein LOC100264...   253   1e-64
ref|XP_002306030.1| predicted protein [Populus trichocarpa] gi|2...   249   1e-63
ref|XP_002324063.1| predicted protein [Populus trichocarpa] gi|2...   243   1e-61
ref|XP_003534446.1| PREDICTED: DCN1-like protein 2-like [Glycine...   241   5e-61

>ref|XP_002531855.1| conserved hypothetical protein [Ricinus communis]
            gi|223528505|gb|EEF30533.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 321

 Score =  261 bits (667), Expect = 3e-67
 Identities = 149/323 (46%), Positives = 195/323 (60%), Gaps = 32/323 (9%)
 Frame = -2

Query: 1249 MDSSDNNMS-IFEIYSRYCGIRSVK-HDXXXXXXXXXXXXXXXXXAS------------- 1115
            MD SD+N + IFEIY RYC IRS K +D                  +             
Sbjct: 1    MDFSDSNWADIFEIYHRYCDIRSGKAYDTDRYEQEDDVQQGKTSRDALAQLLKFVELRVH 60

Query: 1114 ---SIVDDLNTLMPYLDLTVDSCRFARFYDFVFFMCRKNGQKNITVTKAIDAWKLVLKGR 944
               SIVD+L  LM  L+  VD   F+RFYDFVFF+CR+NGQKNITV+KA+ AW+LVL GR
Sbjct: 61   TRISIVDELVKLMSKLEFMVDFSEFSRFYDFVFFICRENGQKNITVSKAVTAWRLVLAGR 120

Query: 943  FRLLNEWCGFVEKHQRHNIPEDTWQQLLAFSRCVHEDLEGYDPKGAWPVLIDEFVDHMYX 764
            FRLLN+WC FV+++QRHNI EDTWQQ+LAFSRCVHE+LEGYDP+GAWPVLID+FV+HMY 
Sbjct: 121  FRLLNQWCEFVQENQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYR 180

Query: 763  XXXXXXXXXXXRGCNCGDSEAEPCRSDDSFPGLKVKAGWKRKAEV--------------E 626
                         CNCGDSE++ C  +D  PGLKV  G KRK  +              +
Sbjct: 181  VSGSNKDSNFF--CNCGDSESQSCVFEDPLPGLKVTPGLKRKLPILQDEEMDSSDYHLPD 238

Query: 625  FSNSKLFENAKRSRSIELDDNRMYREANRRGSTTDDQMENASHGSQLGSSRHSACAIEGS 446
            +++     N+KR+R I      + +E N  G+++ D ME     S LGS++ S CA+EG 
Sbjct: 239  YADLNHMPNSKRNRVI--FPRPLSQEDNPPGNSSSDCMEIIKQNSPLGSTK-SLCAVEGC 295

Query: 445  LSDDLAKMQTTSSY*KFDQKTRI 377
            LS   A + +T +Y + D++ R+
Sbjct: 296  LSKGFAGLFSTRTYLQLDRERRV 318


>ref|XP_002283688.1| PREDICTED: uncharacterized protein LOC100264659 [Vitis vinifera]
            gi|296082930|emb|CBI22231.3| unnamed protein product
            [Vitis vinifera]
          Length = 324

 Score =  253 bits (645), Expect = 1e-64
 Identities = 138/261 (52%), Positives = 172/261 (65%), Gaps = 15/261 (5%)
 Frame = -2

Query: 1114 SIVDDLNTLMPYLDLTVDSCRFARFYDFVFFMCRKNGQKNITVTKAIDAWKLVLKGRFRL 935
            SI D+L  LM  LDLTVD   F+RFYDFVFFMCR+N QKNITV++AI AW++ L GRFRL
Sbjct: 66   SIFDELLRLMLRLDLTVDFSEFSRFYDFVFFMCRENSQKNITVSRAITAWRIALAGRFRL 125

Query: 934  LNEWCGFVEKHQRHNIPEDTWQQLLAFSRCVHEDLEGYDPKGAWPVLIDEFVDHMYXXXX 755
            LN+WC FVEK+QRHNI EDTW+Q+LAFSRCVHE+LEGYDP+GAWPVLID+FV+HMY    
Sbjct: 126  LNQWCDFVEKNQRHNISEDTWRQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRIAG 185

Query: 754  XXXXXXXXRGCNCGDSEAEPCRSDDSFPGLKVKAGWKRKA-------EVEFSNSKLFE-- 602
                      CNCGDSE + C  DDS PGLK   G KRK        E+  S+++  +  
Sbjct: 186  SDDNAKFF--CNCGDSEGQSCEYDDSLPGLKFYPGLKRKLHEDSQRHELVLSDTRFRDSI 243

Query: 601  ------NAKRSRSIELDDNRMYREANRRGSTTDDQMENASHGSQLGSSRHSACAIEGSLS 440
                  N+KRS+   +    +Y E +  G+ TDD ME   H S L SS+ S CA+EG LS
Sbjct: 244  DLNDKLNSKRSKQSLIAGRSVYSE-HPPGAATDDCMEIVKH-SPLSSSK-SPCAVEGCLS 300

Query: 439  DDLAKMQTTSSY*KFDQKTRI 377
               A + +T S   FD++ R+
Sbjct: 301  KGFAGLFSTPSCLHFDRERRV 321


>ref|XP_002306030.1| predicted protein [Populus trichocarpa] gi|222848994|gb|EEE86541.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  249 bits (636), Expect = 1e-63
 Identities = 149/325 (45%), Positives = 187/325 (57%), Gaps = 38/325 (11%)
 Frame = -2

Query: 1237 DNNMSIFEIYSRYCGIRSVK------HD-------XXXXXXXXXXXXXXXXXASSIVDDL 1097
            D+  SIFEIY RY  IRS+K      HD                         +SI D+L
Sbjct: 2    DSPGSIFEIYIRYHDIRSLKSCQTDGHDEHEGKTSRDALAQLSKIVDLKFHSRTSIFDEL 61

Query: 1096 NTLMPYLDLTVDSCRFARFYDFVFFMCRKNGQKNITVTKAIDAWKLVLKGRFRLLNEWCG 917
              LM  L+L  D   F+RFYDFVFFMCR+NGQKNITV KA+ AWKL+L GRFRLLN+WC 
Sbjct: 62   LKLMSKLELMADFSEFSRFYDFVFFMCRENGQKNITVNKAVTAWKLILAGRFRLLNQWCD 121

Query: 916  FVEKHQRHNIPEDTWQQLLAFSRCVHEDLEGYDPK-----------GAWPVLIDEFVDHM 770
            FV+++QRHNI EDTWQQ+LAFSRCVHE+LEGYDP+           GAWPVLID+FV+HM
Sbjct: 122  FVQENQRHNISEDTWQQVLAFSRCVHENLEGYDPEEQCLLVCFLFAGAWPVLIDDFVEHM 181

Query: 769  YXXXXXXXXXXXXRGCNCGDSEAEPCRSDDSFPGLKVKAGWKRK------AEVEFSNSKL 608
            Y              CNCGDSE++ C  +D  PGLK   G KRK       E+  SN+  
Sbjct: 182  YRVLGSNREPNFF--CNCGDSESQSCTFEDPLPGLKDTPGLKRKLSSFQMEEMASSNAVF 239

Query: 607  FE--------NAKRSRSIELDDNRMYREANRRGSTTDDQMENASHGSQLGSSRHSACAIE 452
             +        N+KRSR I  D   +  E N  G++  D M+     + LGS + S CA+E
Sbjct: 240  LDSVSPNFILNSKRSRLI--DYRPLNWEDNPPGNSASDGMDITKQNNSLGSMK-SPCAVE 296

Query: 451  GSLSDDLAKMQTTSSY*KFDQKTRI 377
            G LS   A + +T SY + D++ R+
Sbjct: 297  GCLSRGFAGLFSTRSYLQLDRERRV 321


>ref|XP_002324063.1| predicted protein [Populus trichocarpa] gi|222867065|gb|EEF04196.1|
            predicted protein [Populus trichocarpa]
          Length = 299

 Score =  243 bits (619), Expect = 1e-61
 Identities = 141/303 (46%), Positives = 175/303 (57%), Gaps = 20/303 (6%)
 Frame = -2

Query: 1225 SIFEIYSRYCGIRSV--------------KHDXXXXXXXXXXXXXXXXXASSIVDDLNTL 1088
            SIFEIY RYC IRSV              K                      I D+L  L
Sbjct: 6    SIFEIYRRYCDIRSVKSCQVNEPDETRKGKSSRDSLAQLLKFVDLKFHSRIKIFDELLKL 65

Query: 1087 MPYLDLTVDSCRFARFYDFVFFMCRKNGQKNITVTKAIDAWKLVLKGRFRLLNEWCGFVE 908
            M  L+L  D   F+RFYDFVFFMCR+NGQ+NITV KA+ AWKLVL GRFRLLN+WC F +
Sbjct: 66   MSKLELMADFSEFSRFYDFVFFMCRENGQRNITVNKAVSAWKLVLAGRFRLLNQWCDF-Q 124

Query: 907  KHQRHNIPEDTWQQLLAFSRCVHEDLEGYDPKGAWPVLIDEFVDHMYXXXXXXXXXXXXR 728
            ++QRHNI EDTWQQ+LAFSRCVHE+LEGYDP+GAWPVLID+FV+HMY             
Sbjct: 125  ENQRHNISEDTWQQVLAFSRCVHENLEGYDPEGAWPVLIDDFVEHMYRILGSNKEPNFF- 183

Query: 727  GCNCGDSEAEPCRSDDSFPGLKVKAGWKRK------AEVEFSNSKLFENAKRSRSIELDD 566
             CNCGDSE+ PC  +D  PGLKV  G KRK       E++ S++ LF ++ R   I    
Sbjct: 184  -CNCGDSESRPCTFEDPLPGLKVAPGLKRKLPSFQDEEMDCSDA-LFPDSTRPNHI---- 237

Query: 565  NRMYREANRRGSTTDDQMENASHGSQLGSSRHSACAIEGSLSDDLAKMQTTSSY*KFDQK 386
                        TT D M+     + +GS++ S CA+EG LS   A + +T S  + D+ 
Sbjct: 238  --------LNSKTTSDCMDINKLNNSMGSTK-SPCAVEGCLSRGFAVVFSTRSCLQLDRD 288

Query: 385  TRI 377
             R+
Sbjct: 289  RRV 291


>ref|XP_003534446.1| PREDICTED: DCN1-like protein 2-like [Glycine max]
          Length = 311

 Score =  241 bits (614), Expect = 5e-61
 Identities = 141/316 (44%), Positives = 178/316 (56%), Gaps = 26/316 (8%)
 Frame = -2

Query: 1249 MDSSDNNMSIFEIYSRYCGIRS-------------------VKHDXXXXXXXXXXXXXXX 1127
            MD+S   + IFEIY RYC I+S                    K                 
Sbjct: 1    MDAS--RIDIFEIYRRYCDIKSGHAYIGGEEGYRQDSDIQKAKVSREALTQLSKLVESRV 58

Query: 1126 XXASSIVDDLNTLMPYLDLTVDSCRFARFYDFVFFMCRKNGQKNITVTKAIDAWKLVLKG 947
                +I D+L+ LM  L+L  D   F+RFYDFVFFMCR+NGQKNITV++A+ AWKLVL G
Sbjct: 59   TTGVTIFDELSMLMSRLNLRADFPEFSRFYDFVFFMCRENGQKNITVSRAVTAWKLVLAG 118

Query: 946  RFRLLNEWCGFVEKHQRHNIPEDTWQQLLAFSRCVHEDLEGYDPKGAWPVLIDEFVDHMY 767
            RF LL+ WC FVEK+QR+NI EDTWQQ+LAFS C  + LE YDP+GAWPVLID+FV+HMY
Sbjct: 119  RFSLLHPWCDFVEKNQRYNISEDTWQQVLAFSWCTRDSLEAYDPEGAWPVLIDDFVEHMY 178

Query: 766  XXXXXXXXXXXXRGCNCGDSEAEPCRSDDSFPGLKVKAGWKRKAEVEF-------SNSKL 608
                          CNCGD E++ C  DD  PGL+  +G KRK   +        SN  +
Sbjct: 179  RMQGSYYDNSNFH-CNCGDPESQSCVFDDPLPGLRSFSGLKRKLPEDLSKSDDMDSNDMI 237

Query: 607  FENAKRSRSIELDDNRMYREANRRGSTTDDQMENASHGSQLGSSRHSACAIEGSLSDDLA 428
              N KRSR+ +  D     E N  G+T DD ME +   S L SS  S CA+EG LS   A
Sbjct: 238  LSNCKRSRAHDAVD----LEDNPPGNTADDCMETSRQNSPLCSSM-SPCAVEGCLSKGFA 292

Query: 427  KMQTTSSY*KFDQKTR 380
             + +T S+ +F ++ R
Sbjct: 293  GLLSTRSFVQFGRERR 308


Top