BLASTX nr result

ID: Coptis21_contig00012914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012914
         (1767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog...   464   e-128
ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog...   464   e-128
ref|XP_002512940.1| Splicing factor U2AF-associated protein, put...   464   e-128
ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog...   461   e-127
dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas]                          458   e-126

>ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
          Length = 498

 Score =  464 bits (1195), Expect = e-128
 Identities = 231/380 (60%), Positives = 283/380 (74%), Gaps = 19/380 (5%)
 Frame = -2

Query: 1397 LDGDANGRPSMPPDGEEEFVDDDGTSYKWDRGLGVWVPQDSAFFKSEAFKLEDMTYLHED 1218
            ++GD   RP+ PP+GEEEF DDDGT YKWDR L  WVPQD AFFK E ++ E+MT++ E+
Sbjct: 120  VEGDLE-RPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEE 178

Query: 1217 ELFPTLN--------------VTESALE-----EVANGSDVGAESKPDRKRKLXXXXXXX 1095
            E+FP L+              V  +++E     +  NG     E+K + KRKL       
Sbjct: 179  EVFPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEK 238

Query: 1094 XXXXXXPDSWFDLKINTHVYVTGLPDDVTVEEVVEAFSKCGVIKEDPETKKPRVKIYVDK 915
                  PD WF+LKINTHVYVTGLP+DVT++EVVE FSKCG+IKEDPETKKPRVK+YVD+
Sbjct: 239  KEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDR 298

Query: 914  ETGRKKGDALVSYLKEPSVGLAIQFLDGTPLRPDGKVSMSVSQAKFEQKGEKFVAXXXXX 735
            ETG+KKGDALVSY+KEPSV LA+Q LDGTPLRP GK+ MSV+QAKFEQKG+KFV+     
Sbjct: 299  ETGKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDN 358

Query: 734  XXXXXXXKVEDRMLGWGGRDDAKVSIPATVVLRNMFTPADMRXXXXXXXXXXXDVKLECE 555
                   KVED++LGWGGRDDAKVSIPATV+LR MFTPA+MR           DVK E  
Sbjct: 359  KKKKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEEST 418

Query: 554  KLGPIESIKICENHPQGVVLVKFKDKNDAQKCIESMNGRWFGGEQVHASMDDGSVNHALI 375
            K GP++S+K+CENHPQGVVL++FKD+ DAQKCIE MNGRWFGG+Q+HAS DDG VNHA++
Sbjct: 419  KFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMV 478

Query: 374  RDLDYDAARLDQYGAELEAE 315
            RDL+ DAARL+Q+G+ELEA+
Sbjct: 479  RDLEADAARLEQFGSELEAD 498


>ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
          Length = 496

 Score =  464 bits (1195), Expect = e-128
 Identities = 231/380 (60%), Positives = 283/380 (74%), Gaps = 19/380 (5%)
 Frame = -2

Query: 1397 LDGDANGRPSMPPDGEEEFVDDDGTSYKWDRGLGVWVPQDSAFFKSEAFKLEDMTYLHED 1218
            ++GD   RP+ PP+GEEEF DDDGT YKWDR L  WVPQD AFFK E ++ E+MT++ E+
Sbjct: 118  VEGDLE-RPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQDDAFFKHEQYRPEEMTFMQEE 176

Query: 1217 ELFPTLN--------------VTESALE-----EVANGSDVGAESKPDRKRKLXXXXXXX 1095
            E+FP L+              V  +++E     +  NG     E+K + KRKL       
Sbjct: 177  EVFPQLDADAPCTSIKEEGDSVPSTSIEADHITKETNGKSEETETKKNVKRKLSGNQVEK 236

Query: 1094 XXXXXXPDSWFDLKINTHVYVTGLPDDVTVEEVVEAFSKCGVIKEDPETKKPRVKIYVDK 915
                  PD WF+LKINTHVYVTGLP+DVT++EVVE FSKCG+IKEDPETKKPRVK+YVD+
Sbjct: 237  KEANKGPDGWFELKINTHVYVTGLPEDVTIDEVVEVFSKCGIIKEDPETKKPRVKLYVDR 296

Query: 914  ETGRKKGDALVSYLKEPSVGLAIQFLDGTPLRPDGKVSMSVSQAKFEQKGEKFVAXXXXX 735
            ETG+KKGDALVSY+KEPSV LA+Q LDGTPLRP GK+ MSV+QAKFEQKG+KFV+     
Sbjct: 297  ETGKKKGDALVSYMKEPSVALAMQILDGTPLRPGGKMLMSVTQAKFEQKGDKFVSKKVDN 356

Query: 734  XXXXXXXKVEDRMLGWGGRDDAKVSIPATVVLRNMFTPADMRXXXXXXXXXXXDVKLECE 555
                   KVED++LGWGGRDDAKVSIPATV+LR MFTPA+MR           DVK E  
Sbjct: 357  KKKKKLKKVEDKILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEEST 416

Query: 554  KLGPIESIKICENHPQGVVLVKFKDKNDAQKCIESMNGRWFGGEQVHASMDDGSVNHALI 375
            K GP++S+K+CENHPQGVVL++FKD+ DAQKCIE MNGRWFGG+Q+HAS DDG VNHA++
Sbjct: 417  KFGPVDSVKVCENHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMV 476

Query: 374  RDLDYDAARLDQYGAELEAE 315
            RDL+ DAARL+Q+G+ELEA+
Sbjct: 477  RDLEADAARLEQFGSELEAD 496


>ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus communis]
            gi|223547951|gb|EEF49443.1| Splicing factor
            U2AF-associated protein, putative [Ricinus communis]
          Length = 518

 Score =  464 bits (1194), Expect = e-128
 Identities = 233/386 (60%), Positives = 280/386 (72%), Gaps = 21/386 (5%)
 Frame = -2

Query: 1409 QLKELDGDANGRPSMPPDGEEEFVDDDGTSYKWDRGLGVWVPQDSAFFKSEAFKLEDMTY 1230
            ++ E + +A+ RP  PP+GEEEF DDDGT+YKWDRGL  WVPQD+    +  + LE+MT+
Sbjct: 134  EISEAEAEAD-RPQSPPEGEEEFTDDDGTTYKWDRGLRAWVPQDNTSSVTGQYGLEEMTF 192

Query: 1229 LHEDELFPTLNVTESALEEVANGSDVGA--ESKPDRKRKLXXXXXXXXXXXXXP------ 1074
            L E+++FPT+++  +A +E  NGS      ESK + KRKL                    
Sbjct: 193  LQEEDVFPTVDINNAAFKEEINGSGESETLESKHNGKRKLQGLQDDSKMQADKDTQPDKK 252

Query: 1073 -------------DSWFDLKINTHVYVTGLPDDVTVEEVVEAFSKCGVIKEDPETKKPRV 933
                         DSWF+LK+NTHVY+TGLPDDVT EEVVE FSKCG+IKEDPETKKPRV
Sbjct: 253  EKEADKKEANKAPDSWFELKVNTHVYITGLPDDVTSEEVVEVFSKCGIIKEDPETKKPRV 312

Query: 932  KIYVDKETGRKKGDALVSYLKEPSVGLAIQFLDGTPLRPDGKVSMSVSQAKFEQKGEKFV 753
            KIYVDKETGR KGDALV++LKEPSV LA+Q LDGTPLRP G V MSVS+AKF+QKG++F+
Sbjct: 313  KIYVDKETGRIKGDALVTFLKEPSVDLALQILDGTPLRPGGAVPMSVSRAKFQQKGDRFI 372

Query: 752  AXXXXXXXXXXXXKVEDRMLGWGGRDDAKVSIPATVVLRNMFTPADMRXXXXXXXXXXXD 573
                         +VE+R+LGWGGRDD KVSIPATVVLR MFTPA+MR           D
Sbjct: 373  PKQADNKKKKKLKRVEERILGWGGRDDVKVSIPATVVLRYMFTPAEMRTDENLRSELEVD 432

Query: 572  VKLECEKLGPIESIKICENHPQGVVLVKFKDKNDAQKCIESMNGRWFGGEQVHASMDDGS 393
            ++ EC KLGP++S+K+CENHPQGVVLVKFKD+ DAQ CIE MNGRWFGG QVHAS DDGS
Sbjct: 433  IREECVKLGPVDSVKVCENHPQGVVLVKFKDRKDAQNCIELMNGRWFGGRQVHASEDDGS 492

Query: 392  VNHALIRDLDYDAARLDQYGAELEAE 315
            VNHAL+RDLD DAARL+Q+GAELE E
Sbjct: 493  VNHALVRDLDQDAARLEQFGAELEGE 518


>ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
          Length = 503

 Score =  461 bits (1185), Expect = e-127
 Identities = 230/374 (61%), Positives = 276/374 (73%), Gaps = 15/374 (4%)
 Frame = -2

Query: 1391 GDANGRPSMPPDGEEEFVDDDGTSYKWDRGLGVWVPQDSAFFKSEAFKLEDMTYLHEDEL 1212
            G+ + RPS PP+GEEEF DDDGT YKWDR L  WVPQ+     +E + +++MT+L E+E+
Sbjct: 131  GEDSERPSTPPEGEEEFTDDDGTVYKWDRNLRAWVPQEHPTGSTEPYGVQEMTFLEEEEV 190

Query: 1211 FPTLNVTESA---------------LEEVANGSDVGAESKPDRKRKLXXXXXXXXXXXXX 1077
            FPT+ +++++               L+E  N ++         KRKL             
Sbjct: 191  FPTIPISDASEKFEDSPKLSVSVPPLKEETNEAN-NTNVVSGEKRKLSDQQTDKKEANKP 249

Query: 1076 PDSWFDLKINTHVYVTGLPDDVTVEEVVEAFSKCGVIKEDPETKKPRVKIYVDKETGRKK 897
            PDSWF+LKINTHVYVTGLP+DVT +E+VE FSKCG+IKEDPETKKPRVK+YVDK TGRKK
Sbjct: 250  PDSWFELKINTHVYVTGLPEDVTTDEIVEVFSKCGIIKEDPETKKPRVKLYVDKGTGRKK 309

Query: 896  GDALVSYLKEPSVGLAIQFLDGTPLRPDGKVSMSVSQAKFEQKGEKFVAXXXXXXXXXXX 717
            GDALV+YLKEPSV LAIQ LDG PLRP+GK+ MSVSQAKFEQKG+KFV+           
Sbjct: 310  GDALVTYLKEPSVALAIQILDGAPLRPNGKIPMSVSQAKFEQKGDKFVSKQVDNKKKKKL 369

Query: 716  XKVEDRMLGWGGRDDAKVSIPATVVLRNMFTPADMRXXXXXXXXXXXDVKLECEKLGPIE 537
             KVED+MLGWGGRDDAKVSIPATV+LR MF PA+MR           DVK EC KLGP++
Sbjct: 370  KKVEDKMLGWGGRDDAKVSIPATVILRYMFAPAEMRADENLRLELEEDVKEECTKLGPLD 429

Query: 536  SIKICENHPQGVVLVKFKDKNDAQKCIESMNGRWFGGEQVHASMDDGSVNHALIRDLDYD 357
            S+KICENHPQGVVLV+FKD+ DAQKCIE MNGRWFGG Q+HAS DDGSVNHAL+RDL+ D
Sbjct: 430  SVKICENHPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQIHASEDDGSVNHALVRDLEED 489

Query: 356  AARLDQYGAELEAE 315
            A RL+Q+GAELE +
Sbjct: 490  AIRLEQFGAELEGD 503


>dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas]
          Length = 552

 Score =  458 bits (1178), Expect = e-126
 Identities = 225/364 (61%), Positives = 268/364 (73%), Gaps = 14/364 (3%)
 Frame = -2

Query: 1364 PPDGEEEFVDDDGTSYKWDRGLGVWVPQDSAFFKSEAFKLEDMTYLHEDELFPTLNVTES 1185
            PP+GEEEF DDDGT+YKWDRGL  WVPQD        + L++MT+L E+E+FPT+N+ ++
Sbjct: 189  PPEGEEEFTDDDGTTYKWDRGLRAWVPQDDTSSMGGQYGLDEMTFLQEEEVFPTVNIEDA 248

Query: 1184 ALEEVANGSDVGAESKPDRKRKLXXXXXXXXXXXXXP--------------DSWFDLKIN 1047
            A +E  NG+    E K + KRKL                            DSWF+LK+N
Sbjct: 249  ASKEKFNGTSDTLEPKHNGKRKLMDMQTDNNEKQPDKKEKQADNKEANKAPDSWFELKVN 308

Query: 1046 THVYVTGLPDDVTVEEVVEAFSKCGVIKEDPETKKPRVKIYVDKETGRKKGDALVSYLKE 867
            TH+YVTGLPDDVT EEVVE FSKCG+IKEDPETKKPRVKIYVDKETGR KGDAL++YLKE
Sbjct: 309  THIYVTGLPDDVTAEEVVEVFSKCGIIKEDPETKKPRVKIYVDKETGRTKGDALITYLKE 368

Query: 866  PSVGLAIQFLDGTPLRPDGKVSMSVSQAKFEQKGEKFVAXXXXXXXXXXXXKVEDRMLGW 687
            PSV LA+Q LDGTPLRP G + MSVS+AKFEQKG++F+             +VE+++LGW
Sbjct: 369  PSVDLAMQILDGTPLRPGGTIPMSVSRAKFEQKGDRFIPKKVDNKKKKKLKRVEEKILGW 428

Query: 686  GGRDDAKVSIPATVVLRNMFTPADMRXXXXXXXXXXXDVKLECEKLGPIESIKICENHPQ 507
            GGRDDAKV IPATVVLR MFTPA+MR           DVK EC KLGP++S+K+CENHPQ
Sbjct: 429  GGRDDAKVLIPATVVLRYMFTPAEMRADENLRSELELDVKEECVKLGPVDSVKVCENHPQ 488

Query: 506  GVVLVKFKDKNDAQKCIESMNGRWFGGEQVHASMDDGSVNHALIRDLDYDAARLDQYGAE 327
            GVVLV+FKD+ DAQKCIE MNGRWFGG QVHAS DDGSVNHA++RD   D ARL+Q+GAE
Sbjct: 489  GVVLVRFKDRKDAQKCIELMNGRWFGGRQVHASEDDGSVNHAIVRDYAEDTARLEQFGAE 548

Query: 326  LEAE 315
            LEA+
Sbjct: 549  LEAD 552


Top