BLASTX nr result

ID: Coptis21_contig00012907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012907
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   131   7e-29
dbj|BAE71224.1| putative replication protein A1 [Trifolium prate...   129   3e-28
gb|AFK42202.1| unknown [Medicago truncatula]                          128   4e-28
ref|XP_003622913.1| ATP-dependent RNA helicase dbp9 [Medicago tr...   128   4e-28
ref|XP_003620373.1| ATP-dependent RNA helicase [Medicago truncat...   128   4e-28

>ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Glycine
           max]
          Length = 439

 Score =  131 bits (329), Expect = 7e-29
 Identities = 67/98 (68%), Positives = 71/98 (72%)
 Frame = +1

Query: 1   DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPTQEEEVLFFSERVAQ 180
           DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPE+P QEEEVL   ERV +
Sbjct: 333 DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEEVLLLEERVGE 392

Query: 181 AKRLALTKVKEQGNXXXXXXXXXXXXXXADTYASLKRG 294
           AKRLA+ K+KE G                D Y  LK G
Sbjct: 393 AKRLAVMKMKETGGKKKRRGEEDYDGEDIDKYLGLKEG 430


>dbj|BAE71224.1| putative replication protein A1 [Trifolium pratense]
          Length = 440

 Score =  129 bits (324), Expect = 3e-28
 Identities = 63/73 (86%), Positives = 67/73 (91%)
 Frame = +1

Query: 1   DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPTQEEEVLFFSERVAQ 180
           DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPE+P QEEEVL   ERV++
Sbjct: 333 DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEYPAQEEEVLLLEERVSE 392

Query: 181 AKRLALTKVKEQG 219
           AKRLA TK+KE G
Sbjct: 393 AKRLAATKMKESG 405


>gb|AFK42202.1| unknown [Medicago truncatula]
          Length = 155

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/96 (67%), Positives = 69/96 (71%)
 Frame = +1

Query: 1   DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPTQEEEVLFFSERVAQ 180
           DYIHRVGRTARAGRSGVAISLVNQYELEWY+QIEKLIGKKLPE+P  EEEVL   ERV +
Sbjct: 50  DYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKLIGKKLPEYPANEEEVLLLEERVGE 109

Query: 181 AKRLALTKVKEQGNXXXXXXXXXXXXXXADTYASLK 288
           AKRLA TK+KE G                D Y  LK
Sbjct: 110 AKRLAATKMKESGGKKRRGEGDVGEDDDVDKYFGLK 145


>ref|XP_003622913.1| ATP-dependent RNA helicase dbp9 [Medicago truncatula]
            gi|355497928|gb|AES79131.1| ATP-dependent RNA helicase
            dbp9 [Medicago truncatula]
          Length = 1155

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/96 (67%), Positives = 69/96 (71%)
 Frame = +1

Query: 1    DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPTQEEEVLFFSERVAQ 180
            DYIHRVGRTARAGRSGVAISLVNQYELEWY+QIEKLIGKKLPE+P  EEEVL   ERV +
Sbjct: 1050 DYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKLIGKKLPEYPANEEEVLLLEERVGE 1109

Query: 181  AKRLALTKVKEQGNXXXXXXXXXXXXXXADTYASLK 288
            AKRLA TK+KE G                D Y  LK
Sbjct: 1110 AKRLAATKMKESGGKKRRGEGDIGEEDDVDKYFGLK 1145


>ref|XP_003620373.1| ATP-dependent RNA helicase [Medicago truncatula]
           gi|355495388|gb|AES76591.1| ATP-dependent RNA helicase
           [Medicago truncatula]
          Length = 502

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/96 (67%), Positives = 69/96 (71%)
 Frame = +1

Query: 1   DYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLPEFPTQEEEVLFFSERVAQ 180
           DYIHRVGRTARAGRSGVAISLVNQYELEWY+QIEKLIGKKLPE+P  EEEVL   ERV +
Sbjct: 397 DYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEKLIGKKLPEYPANEEEVLLLEERVGE 456

Query: 181 AKRLALTKVKEQGNXXXXXXXXXXXXXXADTYASLK 288
           AKRLA TK+KE G                D Y  LK
Sbjct: 457 AKRLAATKMKESGGKKRRGEGDVGEDDDVDKYFGLK 492


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