BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012904
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519830.1| DNA binding protein, putative [Ricinus commu...   209   8e-52
ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|2...   207   3e-51
ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245...   207   3e-51
ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|2...   206   5e-51
ref|NP_001148458.1| AT-hook protein 1 [Zea mays] gi|194704752|gb...   202   7e-50

>ref|XP_002519830.1| DNA binding protein, putative [Ricinus communis]
           gi|223540876|gb|EEF42434.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 376

 Score =  209 bits (532), Expect = 8e-52
 Identities = 121/205 (59%), Positives = 142/205 (69%), Gaps = 7/205 (3%)
 Frame = -2

Query: 940 PNVSSYKP--RNRKRP--TKKQQLDPFGSAGR-GFMANVIVVKAGEDIASKIMAFSQQGP 776
           P ++S  P  RNR RP  + K+QLD  G  G  GF  +VI VKAGEDIASKIMAFSQQGP
Sbjct: 143 PAIASDPPSKRNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAGEDIASKIMAFSQQGP 202

Query: 775 HTVCVLSANGAVCNVTLRQPAMYGGTVSYEGRFEIISLSASFLLMEXXXXXXXXXXXXXS 596
            TVC+LSANGA+CNVTLRQPAM GGTV+YEGR+EIISLS SFLL E             S
Sbjct: 203 RTVCILSANGAICNVTLRQPAMSGGTVTYEGRYEIISLSGSFLLSENNGNRSRSGGLSVS 262

Query: 595 LAGSDGRILGGGVAGMLIAATPVQVVIGSFGAE-ENPMSELSLREPLLAPAPYMMSFGMP 419
           LAGSDGR+LGGGVAGML+AA+PVQV++GSF A+ +   S +    P  AP   M++FG P
Sbjct: 263 LAGSDGRVLGGGVAGMLMAASPVQVIVGSFIADGKKSNSNIHKSGPSSAPTSQMLNFGAP 322

Query: 418 VAAVPPPFPSTYSGSSDETG-SPIN 347
           +    PP     S SSDE G SP+N
Sbjct: 323 MTTSSPPSQGVSSESSDENGSSPLN 347


>ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|222833839|gb|EEE72316.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  207 bits (527), Expect = 3e-51
 Identities = 120/205 (58%), Positives = 142/205 (69%), Gaps = 7/205 (3%)
 Frame = -2

Query: 940 PNVSSYKP--RNRKRP--TKKQQLDPFGSAGR-GFMANVIVVKAGEDIASKIMAFSQQGP 776
           P+V+S  P  ++R RP  + K+QLD  G  G  GF  +VI VKAGEDIASKIMAFSQQGP
Sbjct: 54  PDVASEHPSKKHRGRPPGSGKKQLDALGGTGGVGFTPHVITVKAGEDIASKIMAFSQQGP 113

Query: 775 HTVCVLSANGAVCNVTLRQPAMYGGTVSYEGRFEIISLSASFLLMEXXXXXXXXXXXXXS 596
            TVC+LSANGA+CNVTLRQPAM GG+V+YEGRFEIISLS SFLL E             S
Sbjct: 114 RTVCILSANGAICNVTLRQPAMSGGSVTYEGRFEIISLSGSFLLSESNGSRSRTGGLSVS 173

Query: 595 LAGSDGRILGGGVAGMLIAATPVQVVIGSFGAEENPMSELSLRE-PLLAPAPYMMSFGMP 419
           LAGSDGR+LGGGVAGML AA+ VQV++GSF A+    +  SL+  P   P P M++FG P
Sbjct: 174 LAGSDGRVLGGGVAGMLTAASAVQVILGSFIADGKKSNSKSLKSGPSSTPPPQMLNFGAP 233

Query: 418 VAAVPPPFPSTYSGSSDET-GSPIN 347
           +    PP     S SSDE  GSP+N
Sbjct: 234 LTTASPPSRGGSSESSDENGGSPVN 258


>ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245362 [Vitis vinifera]
           gi|297742130|emb|CBI33917.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  207 bits (527), Expect = 3e-51
 Identities = 117/215 (54%), Positives = 139/215 (64%), Gaps = 2/215 (0%)
 Frame = -2

Query: 916 RNRKRP--TKKQQLDPFGSAGRGFMANVIVVKAGEDIASKIMAFSQQGPHTVCVLSANGA 743
           RNR RP  + K+QLD  G+AG GF  +VI V  GEDIASKIMAFSQQGP TVC+LSANGA
Sbjct: 129 RNRGRPPGSGKKQLDALGAAGVGFTPHVITVNVGEDIASKIMAFSQQGPRTVCILSANGA 188

Query: 742 VCNVTLRQPAMYGGTVSYEGRFEIISLSASFLLMEXXXXXXXXXXXXXSLAGSDGRILGG 563
           +CNVTLRQPAM GGT+SYEGRF+IISLS SFLL E             SLAGSDGR+LGG
Sbjct: 189 ICNVTLRQPAMSGGTISYEGRFDIISLSGSFLLSEDNGSRHRTGGLSVSLAGSDGRVLGG 248

Query: 562 GVAGMLIAATPVQVVIGSFGAEENPMSELSLREPLLAPAPYMMSFGMPVAAVPPPFPSTY 383
           GVAGML AATPVQVV+GSF A +   +  +      AP   M++FG PV    P    + 
Sbjct: 249 GVAGMLTAATPVQVVVGSFIA-DGKKTNTNQSGSSSAPPAQMLNFGAPVVPASPSQGGSS 307

Query: 382 SGSSDETGSPINFSSRACNDTEQSNQATYTYSSIG 278
             S +  GSP+N      N+  Q       Y+++G
Sbjct: 308 ESSDENGGSPLNRGPLPYNNVSQPIHQMPMYAAMG 342


>ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|222870276|gb|EEF07407.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score =  206 bits (525), Expect = 5e-51
 Identities = 119/207 (57%), Positives = 139/207 (67%), Gaps = 5/207 (2%)
 Frame = -2

Query: 916 RNRKRP--TKKQQLDPFGSAGR-GFMANVIVVKAGEDIASKIMAFSQQGPHTVCVLSANG 746
           +NR RP  + K+QLD  G  G  GF  +VI VKAGEDIASKIMAFSQQGP TVC+LSANG
Sbjct: 153 KNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAGEDIASKIMAFSQQGPRTVCILSANG 212

Query: 745 AVCNVTLRQPAMYGGTVSYEGRFEIISLSASFLLMEXXXXXXXXXXXXXSLAGSDGRILG 566
           A+CNVTLRQPAM GG+V+YEGRFEIISLS SFLL E             SLAGSDGR+LG
Sbjct: 213 AICNVTLRQPAMSGGSVTYEGRFEIISLSGSFLLSESNGSRSRSGGLSVSLAGSDGRVLG 272

Query: 565 GGVAGMLIAATPVQVVIGSFGAE-ENPMSELSLREPLLAPAPYMMSFGMPVAAVPPPFPS 389
           GGVAGML AA+PVQV++GSF A+ +   S  S   P   P P M++F  P+    PP   
Sbjct: 273 GGVAGMLTAASPVQVIVGSFIADGKKSNSSASKSGPSSTPPPQMLNFSAPLTTASPPSQG 332

Query: 388 TYSGSSDET-GSPINFSSRACNDTEQS 311
             S SSDE  GSP+N +     +  QS
Sbjct: 333 GSSDSSDENGGSPVNRNPGIYGNPNQS 359


>ref|NP_001148458.1| AT-hook protein 1 [Zea mays] gi|194704752|gb|ACF86460.1| unknown
           [Zea mays] gi|195619414|gb|ACG31537.1| AT-hook protein 1
           [Zea mays] gi|224030103|gb|ACN34127.1| unknown [Zea
           mays] gi|224030137|gb|ACN34144.1| unknown [Zea mays]
           gi|224033127|gb|ACN35639.1| unknown [Zea mays]
           gi|414867873|tpg|DAA46430.1| TPA: AT-hook protein 1
           isoform 1 [Zea mays] gi|414867874|tpg|DAA46431.1| TPA:
           AT-hook protein 1 isoform 2 [Zea mays]
           gi|414867875|tpg|DAA46432.1| TPA: AT-hook protein 1
           isoform 3 [Zea mays]
          Length = 417

 Score =  202 bits (515), Expect = 7e-50
 Identities = 113/206 (54%), Positives = 139/206 (67%), Gaps = 5/206 (2%)
 Frame = -2

Query: 916 RNRKRPT---KKQQLDPFGSAGRGFMANVIVVKAGEDIASKIMAFSQQGPHTVCVLSANG 746
           + R RP    KK+Q +  GS G  F  +++ VKAGED+ASKIM FSQQGP TVC+LSANG
Sbjct: 172 KRRGRPPGSGKKKQFEALGSWGIAFTPHILTVKAGEDVASKIMTFSQQGPRTVCILSANG 231

Query: 745 AVCNVTLRQPAMYGGTVSYEGRFEIISLSASFLLMEXXXXXXXXXXXXXSLAGSDGRILG 566
           A+ NVTLRQPA  GG V+YEGRFEIISLS SFLL E             +LAGSDGR+LG
Sbjct: 232 AISNVTLRQPATSGGLVTYEGRFEIISLSGSFLLAEDGDTRSRTGGLSVALAGSDGRVLG 291

Query: 565 GGVAGMLIAATPVQVVIGSFGAE--ENPMSELSLREPLLAPAPYMMSFGMPVAAVPPPFP 392
           G VAGML+AATPVQVV+ SF AE  ++  +E    EP+ AP P M +F  P  A  PP  
Sbjct: 292 GCVAGMLMAATPVQVVVASFIAEGKKSKPAEARKVEPMAAPPPQMATFVPPPLATSPPSE 351

Query: 391 STYSGSSDETGSPINFSSRACNDTEQ 314
            T S SSD++GSPI+ S+   +++ Q
Sbjct: 352 GTSSASSDDSGSPIHHSAMPFSNSSQ 377