BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012897
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170178.1| PREDICTED: THO complex subunit 3-like [Cucum...   329   1e-88
ref|XP_004149572.1| PREDICTED: THO complex subunit 3-like [Cucum...   329   1e-88
ref|XP_003551358.1| PREDICTED: THO complex subunit 3-like [Glyci...   328   4e-88
ref|XP_003532202.1| PREDICTED: THO complex subunit 3-like [Glyci...   328   4e-88
gb|ADE77625.1| unknown [Picea sitchensis]                             325   2e-87

>ref|XP_004170178.1| PREDICTED: THO complex subunit 3-like [Cucumis sativus]
          Length = 314

 Score =  329 bits (844), Expect = 1e-88
 Identities = 153/167 (91%), Positives = 159/167 (95%)
 Frame = -3

Query: 503 SVPNFKNLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARISHIEPHGHSKVKDIELK 324
           S   FKNLHSREYQGHKKKVHSVAWNCTG KLASGSVDQTAR+ HIEPHGH KVKD+ELK
Sbjct: 4   SAQAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELK 63

Query: 323 GHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHI 144
           GHTDSVDQLCWDPKH+DLIATASGDKTVRLWDAR+GKCSQQ ELSGENINITYKPDGTHI
Sbjct: 64  GHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGTHI 123

Query: 143 AVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNTTGEIFFLTTGN 3
           AVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWN TGE+FFLTTGN
Sbjct: 124 AVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGN 170


>ref|XP_004149572.1| PREDICTED: THO complex subunit 3-like [Cucumis sativus]
          Length = 314

 Score =  329 bits (844), Expect = 1e-88
 Identities = 153/167 (91%), Positives = 159/167 (95%)
 Frame = -3

Query: 503 SVPNFKNLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARISHIEPHGHSKVKDIELK 324
           S   FKNLHSREYQGHKKKVHSVAWNCTG KLASGSVDQTAR+ HIEPHGH KVKD+ELK
Sbjct: 4   SAQAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELK 63

Query: 323 GHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHI 144
           GHTDSVDQLCWDPKH+DLIATASGDKTVRLWDAR+GKCSQQ ELSGENINITYKPDGTHI
Sbjct: 64  GHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGTHI 123

Query: 143 AVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNTTGEIFFLTTGN 3
           AVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWN TGE+FFLTTGN
Sbjct: 124 AVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGN 170


>ref|XP_003551358.1| PREDICTED: THO complex subunit 3-like [Glycine max]
          Length = 313

 Score =  328 bits (840), Expect = 4e-88
 Identities = 153/163 (93%), Positives = 157/163 (96%)
 Frame = -3

Query: 491 FKNLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARISHIEPHGHSKVKDIELKGHTD 312
           FKNLH+REY GHKKKVHSVAWNC GTKLASGSVDQTARI HIEPHGH KVKDIELKGHTD
Sbjct: 7   FKNLHNREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIELKGHTD 66

Query: 311 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHIAVGN 132
           SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ ELSGENINITYKPDGTH+AVGN
Sbjct: 67  SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHVAVGN 126

Query: 131 RDDELTILDVRKFKPIHKRKFNYEVNEIAWNTTGEIFFLTTGN 3
           RDDELTILDVRKFKPIH+RKFNYEVNEIAWN TGE+FFLTTGN
Sbjct: 127 RDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEMFFLTTGN 169


>ref|XP_003532202.1| PREDICTED: THO complex subunit 3-like [Glycine max]
          Length = 313

 Score =  328 bits (840), Expect = 4e-88
 Identities = 153/163 (93%), Positives = 157/163 (96%)
 Frame = -3

Query: 491 FKNLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARISHIEPHGHSKVKDIELKGHTD 312
           FKNLHSREY GHKKKVHSVAWNC GTKLASGSVDQTARI HIEPHGH KVKDIELKGHTD
Sbjct: 7   FKNLHSREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIELKGHTD 66

Query: 311 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHIAVGN 132
           SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ ELSGENINITYKPDGTH+AVGN
Sbjct: 67  SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHVAVGN 126

Query: 131 RDDELTILDVRKFKPIHKRKFNYEVNEIAWNTTGEIFFLTTGN 3
           RDDELTILDVRKFKPIH+RKFNYEVNEI+WN TGE+FFLTTGN
Sbjct: 127 RDDELTILDVRKFKPIHRRKFNYEVNEISWNMTGEMFFLTTGN 169


>gb|ADE77625.1| unknown [Picea sitchensis]
          Length = 327

 Score =  325 bits (834), Expect = 2e-87
 Identities = 149/167 (89%), Positives = 161/167 (96%)
 Frame = -3

Query: 503 SVPNFKNLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARISHIEPHGHSKVKDIELK 324
           S PNFKNLH+REY  HKKKVHSVAWNCTGTKLASGSVDQTAR+ +IEPHGHSK KD+ELK
Sbjct: 17  SAPNFKNLHTREYAAHKKKVHSVAWNCTGTKLASGSVDQTARVWNIEPHGHSKAKDLELK 76

Query: 323 GHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHI 144
           GH DSVDQLCWDPKHA+L+ATASGD+TVRLWDARSGKCSQQVELSGENINIT+KPDGTHI
Sbjct: 77  GHADSVDQLCWDPKHAELLATASGDRTVRLWDARSGKCSQQVELSGENINITFKPDGTHI 136

Query: 143 AVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNTTGEIFFLTTGN 3
           AVGNRDDELTI+DVRKFKP+HKRKF+YEVNEIAWNTTGE+FFLTTGN
Sbjct: 137 AVGNRDDELTIIDVRKFKPLHKRKFSYEVNEIAWNTTGELFFLTTGN 183