BLASTX nr result

ID: Coptis21_contig00012891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012891
         (1418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274048.1| PREDICTED: transcription factor TCP14-like i...   396   e-108
ref|XP_002268569.1| PREDICTED: transcription factor TCP15-like [...   389   e-105
emb|CBI31976.3| unnamed protein product [Vitis vinifera]              361   2e-97
ref|XP_002522405.1| hypothetical protein RCOM_0835810 [Ricinus c...   361   2e-97
ref|XP_002511563.1| transcription factor, putative [Ricinus comm...   348   1e-93

>ref|XP_002274048.1| PREDICTED: transcription factor TCP14-like isoform 2 [Vitis vinifera]
          Length = 353

 Score =  396 bits (1018), Expect = e-108
 Identities = 222/366 (60%), Positives = 256/366 (69%), Gaps = 2/366 (0%)
 Frame = +3

Query: 99   MDGENGMHTRPNFPLQLLEKKEEADVCSSSGYPGLTISPETNALQSSPTSLQIAEASKKP 278
            M+GENG+  RPNFPLQLLEK ++ +V S+             A  S P   QI+E  KKP
Sbjct: 1    MEGENGIR-RPNFPLQLLEKNKD-EVAST-------------ASNSGP---QISEPPKKP 42

Query: 279  APKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 458
             PKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA
Sbjct: 43   PPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 102

Query: 459  ATGTGTIPANFTXXXXXXXXXXXXXXXXXXXRSTYFNPNFVTPQLRMRSEWERNIDESQR 638
            ATGTGTIPANFT                   R++Y+NPNF     R R+EWERNIDES R
Sbjct: 103  ATGTGTIPANFTSLNISLRSSGSSMSAPSHLRTSYYNPNFA----RNRTEWERNIDESLR 158

Query: 639  RILYPSVGF-XXXXXXXXXXXXXXXXXXXXXAKQELRDQCLDMGDTDGSMGRKSRPEQDT 815
            RI+ P VG                       AK ELR+ CLD+ D + ++GRK +PEQD 
Sbjct: 159  RIVLPGVGLSSENSSSTLLNFSSSSVNAMLQAKPELRETCLDVSDAEATIGRKRQPEQDP 218

Query: 816  SHLQHQMGNYMFQSASSGSLPAAVSPSQIPTTFWMVTNPNPSPNNQVMSGDPIWTFPSVS 995
            SH   QMGNY+ QS  SGS+P+  + SQIPTTFWMVTN    P+NQVMSGDP+WTFPSV+
Sbjct: 219  SH--SQMGNYLLQS-GSGSIPS--THSQIPTTFWMVTN----PSNQVMSGDPVWTFPSVN 269

Query: 996  NTNVYRGSGSSGLHFMNLPTPLALLPSQQLGSAMGG-GGATTEHLGMLAALNAYRPLMGS 1172
            N+++YRG+ SSGLHFMN PTP+ALLP QQLGS +GG GG    HLGMLAALNA+RPL G+
Sbjct: 270  NSSMYRGTMSSGLHFMNFPTPMALLPGQQLGSGIGGSGGVADGHLGMLAALNAFRPLPGN 329

Query: 1173 GPSESQ 1190
            G  +SQ
Sbjct: 330  GAPDSQ 335


>ref|XP_002268569.1| PREDICTED: transcription factor TCP15-like [Vitis vinifera]
          Length = 369

 Score =  389 bits (998), Expect = e-105
 Identities = 226/381 (59%), Positives = 250/381 (65%), Gaps = 11/381 (2%)
 Frame = +3

Query: 96   LMDGENGMHTRPNFPLQLLEKKEEADVCSSSGYPGLTISPETNALQSSPTSLQIA-EASK 272
            +M+G + +H RPNFP QLLEKKEE + CSSSGYP L IS        S +SLQIA E SK
Sbjct: 1    MMEGGDELH-RPNFPFQLLEKKEE-EACSSSGYPSLAISSAEPNTNRSNSSLQIAAEPSK 58

Query: 273  KPAPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAV 452
            KP PKRTSTKDRHTKVDGRGRRIRMPA CAARVFQLTRELGHKSDGETIEWLLQQAEPAV
Sbjct: 59   KPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAV 118

Query: 453  IAATGTGTIPANFTXXXXXXXXXXXXXXXXXXXRSTYFNPNFVTPQLRMRSEWERNIDES 632
            IAATGTGTIPANFT                   RSTYFNPNF  P               
Sbjct: 119  IAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSTYFNPNFSVP--------------- 163

Query: 633  QRRILYPSVGFXXXXXXXXXXXXXXXXXXXXXAKQELRDQCLDMGDTDGSMGRKSRPEQD 812
            QRR L+P  G                      AKQELRD  LD+ +T+ S+GRK RPEQD
Sbjct: 164  QRRSLFP--GLSSENSSTLVNFQSNNLNSMFQAKQELRDTSLDLSETEESIGRKRRPEQD 221

Query: 813  TSHLQHQMGNYMFQSASSGSLPAAVSPSQIPTTFWMVTNPNPSPNNQVMSGDPIWTFPSV 992
             S  Q QMG+Y+ QS S+GS+PA  S  QIP  FWM+TN     NNQVMS DPIW FPSV
Sbjct: 222  LS--QQQMGSYLLQS-STGSIPA--SHGQIPANFWMLTN----SNNQVMSADPIWPFPSV 272

Query: 993  SNTNVYRGSGSSGLHFMNLPTPLALLPSQQLGSAMGGG----------GATTEHLGMLAA 1142
            +N+N+YRG+ SSGLHFMN PTP+ALLPSQQL S  GGG          G    H  MLA 
Sbjct: 273  NNSNLYRGTMSSGLHFMNFPTPVALLPSQQLSSGGGGGSGGGGGGGGSGMGEGHFNMLAG 332

Query: 1143 LNAYRPLMGSGPSESQARGNE 1205
            LN YRP+MGSG SESQA G++
Sbjct: 333  LNPYRPVMGSGVSESQASGSQ 353


>emb|CBI31976.3| unnamed protein product [Vitis vinifera]
          Length = 317

 Score =  361 bits (927), Expect = 2e-97
 Identities = 202/337 (59%), Positives = 233/337 (69%)
 Frame = +3

Query: 99   MDGENGMHTRPNFPLQLLEKKEEADVCSSSGYPGLTISPETNALQSSPTSLQIAEASKKP 278
            M+GENG+  RPNFPLQLLEK ++ +V S+             A  S P   QI+E  KKP
Sbjct: 1    MEGENGIR-RPNFPLQLLEKNKD-EVAST-------------ASNSGP---QISEPPKKP 42

Query: 279  APKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 458
             PKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA
Sbjct: 43   PPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 102

Query: 459  ATGTGTIPANFTXXXXXXXXXXXXXXXXXXXRSTYFNPNFVTPQLRMRSEWERNIDESQR 638
            ATGTGTIPANFT                   R++Y+NPNF     R R+EWERNIDES R
Sbjct: 103  ATGTGTIPANFTSLNISLRSSGSSMSAPSHLRTSYYNPNFA----RNRTEWERNIDESLR 158

Query: 639  RILYPSVGFXXXXXXXXXXXXXXXXXXXXXAKQELRDQCLDMGDTDGSMGRKSRPEQDTS 818
            RI+ P                         AK ELR+ CLD+ D + ++GRK +PEQD S
Sbjct: 159  RIVLPG------------------------AKPELRETCLDVSDAEATIGRKRQPEQDPS 194

Query: 819  HLQHQMGNYMFQSASSGSLPAAVSPSQIPTTFWMVTNPNPSPNNQVMSGDPIWTFPSVSN 998
            H   QMGNY+ QS  SGS+P+  + SQIPTTFWMVTN    P+NQVMSGDP+WTFPSV+N
Sbjct: 195  H--SQMGNYLLQS-GSGSIPS--THSQIPTTFWMVTN----PSNQVMSGDPVWTFPSVNN 245

Query: 999  TNVYRGSGSSGLHFMNLPTPLALLPSQQLGSAMGGGG 1109
            +++YRG+ SSGLHFMN PTP+ALLP QQLGS +GG G
Sbjct: 246  SSMYRGTMSSGLHFMNFPTPMALLPGQQLGSGIGGSG 282


>ref|XP_002522405.1| hypothetical protein RCOM_0835810 [Ricinus communis]
            gi|223538290|gb|EEF39897.1| hypothetical protein
            RCOM_0835810 [Ricinus communis]
          Length = 420

 Score =  361 bits (927), Expect = 2e-97
 Identities = 219/414 (52%), Positives = 259/414 (62%), Gaps = 45/414 (10%)
 Frame = +3

Query: 96   LMDGENGMHTRPNFPLQLLEKKEEADVCSSSGYPGLTISPETNALQSSPTSLQI---AEA 266
            +M+ ENG+ TRPNFPLQLLEKK+E +         L   P+ + LQ      Q+   + +
Sbjct: 2    IMEPENGIRTRPNFPLQLLEKKQEQEQEQQQHQQQL---PDHHLLQQQQQQQQLISSSSS 58

Query: 267  SKKPAPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEP 446
            SKKP PKRTSTKDRHTKV+GRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEP
Sbjct: 59   SKKPPPKRTSTKDRHTKVEGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEP 118

Query: 447  AVIAATGTGTIPANFTXXXXXXXXXXXXXXXXXXXRSTYFNPNFVTPQ--LRMRSEWERN 620
            +VIAATGTGTIPANFT                   R+TYFNPNFV+ Q  LR R++WER+
Sbjct: 119  SVIAATGTGTIPANFTSLNISLRSSGSSISASHHLRNTYFNPNFVSHQQHLRNRTDWERS 178

Query: 621  I------DESQRRILYP--SVGF-----------XXXXXXXXXXXXXXXXXXXXXAKQEL 743
            I       + QRRIL+P  S+ F                                +KQE+
Sbjct: 179  IIIDEATSQHQRRILFPDDSLSFSSISSSNNNAGGTLNTGAGVVLQGAATTSADVSKQEV 238

Query: 744  RD--QCLDM--GDTDGSMGRKSRPEQD---TSHLQHQMGNYMFQSASSGSLPAAVSPSQI 902
            RD   CL +  GD + S+GRK R E +    SH  HQMG+Y+ QS SSG++P   SP+  
Sbjct: 239  RDTSTCLQVPHGDVETSIGRKRRSEHELLSQSH-YHQMGSYLLQSTSSGTIPTTHSPT-- 295

Query: 903  PTTFWMVTNPNPSPNNQVMSGDPIWTFP--SVSNTNVYRGSGSSGLHFMNLPTPLALLPS 1076
            P TFWMVTNPN   +NQV+SGDP+ TFP  S S  ++YRGS SSGL FMN PTP+ALLPS
Sbjct: 296  PATFWMVTNPN---SNQVISGDPVVTFPSFSASTNSMYRGSMSSGLRFMNFPTPMALLPS 352

Query: 1077 QQLGSAMGGGG------------ATTEHLGMLAALNAYRPLMGSGPSESQARGN 1202
            QQL S   GGG             T  HLGMLAA NAYRP++GSG  ES A G+
Sbjct: 353  QQLDSPTSGGGGGGGAGSGGSSIVTDSHLGMLAAFNAYRPILGSGAPESPASGS 406


>ref|XP_002511563.1| transcription factor, putative [Ricinus communis]
            gi|223550678|gb|EEF52165.1| transcription factor,
            putative [Ricinus communis]
          Length = 401

 Score =  348 bits (894), Expect = 1e-93
 Identities = 215/386 (55%), Positives = 241/386 (62%), Gaps = 25/386 (6%)
 Frame = +3

Query: 120  HTRPNFPLQLLEKKEEADVCSSSGYPG-LTISPETN---------------AL-QSSPTS 248
            H RP FP QLLEKKE+    SSS YP  L IS E N               AL +SS + 
Sbjct: 17   HHRPTFPFQLLEKKEDEPCSSSSPYPSALPISNEPNNNNSKNSNNNTANNTALNRSSSSG 76

Query: 249  LQIA-EASKKPAPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEW 425
            LQIA E SKKP PKRTSTKDRHTKVDGRGRRIRMPA CAARVFQLTRELGHKSDGETIEW
Sbjct: 77   LQIAPEPSKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEW 136

Query: 426  LLQQAEPAVIAATGTGTIPANFTXXXXXXXXXXXXXXXXXXXRSTYFNPNFVTPQLRMRS 605
            LLQQAEPAVIAATGTGTIPANFT                   RS  FNPNF         
Sbjct: 137  LLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSASFNPNF--------- 187

Query: 606  EWERNIDESQRRILYPSVGFXXXXXXXXXXXXXXXXXXXXXAKQELRD-QCLDMG-DTDG 779
                     QRR L+P +G                      AKQELRD   L++  +T+ 
Sbjct: 188  ------SMQQRRSLFPGIGLDTSPAPTFLNFQSSNLNAVLQAKQELRDTSSLELSTETEE 241

Query: 780  SMGRKSRPEQDTSHLQHQMGNYMFQSASSGSLPAAVSPSQIPTTFWMVTNPNPSPNNQVM 959
            S+ RK R EQD S  QHQMG+Y+ QS S+G++PAA S SQIP  FWM+ N    PNNQVM
Sbjct: 242  SLSRKRRSEQDLSSQQHQMGSYLLQS-STGAIPAA-SHSQIPANFWMLAN----PNNQVM 295

Query: 960  SGDPIWTFPSVSNTNVYRGSGSSGLHFMNLPTPLALLPSQQLGSA----MGGGGATTE-H 1124
            SGDPIWTFPSV+N+ +YR + SSGLHFMN P P+ALLP QQLG +     GGG + +E H
Sbjct: 296  SGDPIWTFPSVNNSALYRSTTSSGLHFMNFPAPVALLPGQQLGGSTSIGSGGGNSMSEGH 355

Query: 1125 LGMLAALNAYRPLMGSGPSESQARGN 1202
            L MLA LN YRP   S  S+SQA G+
Sbjct: 356  LNMLAGLNPYRP---SAMSDSQASGS 378


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