BLASTX nr result

ID: Coptis21_contig00012890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012890
         (1348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269214.1| PREDICTED: probable leucine-rich repeat rece...   552   e-155
ref|XP_003614019.1| Leucine-rich repeat receptor protein kinase ...   541   e-151
ref|NP_200932.2| leucine-rich repeat-containing protein [Arabido...   538   e-150
ref|XP_002864726.1| protein binding protein [Arabidopsis lyrata ...   537   e-150
gb|AAK70805.1| leucine-rich repeat resistance protein-like prote...   536   e-150

>ref|XP_002269214.1| PREDICTED: probable leucine-rich repeat receptor-like protein kinase
            At1g35710 [Vitis vinifera] gi|297738074|emb|CBI27275.3|
            unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  552 bits (1422), Expect = e-155
 Identities = 269/325 (82%), Positives = 290/325 (89%)
 Frame = -1

Query: 1225 SSRSLITWLCFLSILVNFAHCKTLKRDVKALNEIKASLGWRVVYAWVXXXXXXXXXXXPW 1046
            SS   +  +  LS+ ++   CKTLKRDVKALNEIKASLGWRVVYAWV           PW
Sbjct: 5    SSSVALNLILLLSLFLDLGLCKTLKRDVKALNEIKASLGWRVVYAWVGDDPCGDGDLPPW 64

Query: 1045 SGVTCSTQGDYRVVTELEVYAVSIVGPFPTAVTNLLDLTRLDLHNNKLTGPIPPQIGRLR 866
            SGVTCSTQGDYRVVTELEVYAVSIVGPFPTAVTNLLDLTRLDLHNNKLTGPIPPQIGRL+
Sbjct: 65   SGVTCSTQGDYRVVTELEVYAVSIVGPFPTAVTNLLDLTRLDLHNNKLTGPIPPQIGRLK 124

Query: 865  RLKILNLRWNKLQDVIPPEIGELKQLTHLYLSFNSFKGEIPKELANLPELRYLYLHENRF 686
            RL+ILNLRWNKLQDVIPPEIGELK+LTHLYLSFN+FKGEIPKELANLPELRYLYLHENRF
Sbjct: 125  RLRILNLRWNKLQDVIPPEIGELKRLTHLYLSFNNFKGEIPKELANLPELRYLYLHENRF 184

Query: 685  TGRVPAELGNLPHLRHLDVGNNHMVGTIRELIRLEGSFPALRNVYLNNNYLTGGIPAQLA 506
             GR+P ELG L +LRHLDVGNNH+VGTIRELIR+EG FPALRN+YLNNNY +GGIPAQLA
Sbjct: 185  VGRIPPELGTLQNLRHLDVGNNHLVGTIRELIRIEGCFPALRNLYLNNNYFSGGIPAQLA 244

Query: 505  NLTNLEILYLSYNKMSGTIPPGLAHIPRLTYLYLDHNQFSGRIPDALYKHPFLKEMYIEV 326
            NLTNLEILYLS+NKMSG +P GLAHIPRLT L+LDHNQFSGRIPDA YKHPFLKEMYIE 
Sbjct: 245  NLTNLEILYLSHNKMSGVVPSGLAHIPRLTSLFLDHNQFSGRIPDAFYKHPFLKEMYIEG 304

Query: 325  NGFRPGVKPIGAHKVLELSDSEFLF 251
            N FRPGVKPIG HKVLE+SD++FLF
Sbjct: 305  NAFRPGVKPIGVHKVLEVSDTDFLF 329


>ref|XP_003614019.1| Leucine-rich repeat receptor protein kinase EXS [Medicago truncatula]
            gi|355515354|gb|AES96977.1| Leucine-rich repeat receptor
            protein kinase EXS [Medicago truncatula]
          Length = 329

 Score =  541 bits (1395), Expect = e-151
 Identities = 268/327 (81%), Positives = 288/327 (88%)
 Frame = -1

Query: 1234 IKMSSRSLITWLCFLSILVNFAHCKTLKRDVKALNEIKASLGWRVVYAWVXXXXXXXXXX 1055
            I  +S S I ++  LSIL NFAHCKTLKRDVKALNEIKASLGWRVVYAWV          
Sbjct: 4    IPFTSLSFI-FILALSIL-NFAHCKTLKRDVKALNEIKASLGWRVVYAWVGDDPCGDGDL 61

Query: 1054 XPWSGVTCSTQGDYRVVTELEVYAVSIVGPFPTAVTNLLDLTRLDLHNNKLTGPIPPQIG 875
              WSGVTCST GDYRVVTELEVYAVSIVGPFPTAVT+LLDLTRLDLHNNKLTGPIPPQIG
Sbjct: 62   PAWSGVTCSTVGDYRVVTELEVYAVSIVGPFPTAVTSLLDLTRLDLHNNKLTGPIPPQIG 121

Query: 874  RLRRLKILNLRWNKLQDVIPPEIGELKQLTHLYLSFNSFKGEIPKELANLPELRYLYLHE 695
            RL+RLKILNLRWNKLQD IPPEIGELK LTHLYLSFNSFKGEIP+ELA+LP+LRYLYLHE
Sbjct: 122  RLKRLKILNLRWNKLQDAIPPEIGELKSLTHLYLSFNSFKGEIPRELADLPDLRYLYLHE 181

Query: 694  NRFTGRVPAELGNLPHLRHLDVGNNHMVGTIRELIRLEGSFPALRNVYLNNNYLTGGIPA 515
            NR TGR+P ELG L +LRHLD GNNH+VGTIRELIR+EG FP+LRN+YLNNNY TGGIPA
Sbjct: 182  NRLTGRIPPELGTLQNLRHLDAGNNHLVGTIRELIRIEGCFPSLRNLYLNNNYFTGGIPA 241

Query: 514  QLANLTNLEILYLSYNKMSGTIPPGLAHIPRLTYLYLDHNQFSGRIPDALYKHPFLKEMY 335
            QLANL++LEILYLSYNKMSG IP  +AHIP+LTYLYLDHNQFSGRIP+  YKHPFLKEMY
Sbjct: 242  QLANLSSLEILYLSYNKMSGVIPSSVAHIPKLTYLYLDHNQFSGRIPEPFYKHPFLKEMY 301

Query: 334  IEVNGFRPGVKPIGAHKVLELSDSEFL 254
            IE N FRPGV PIG HKVLE+SDSEFL
Sbjct: 302  IEGNAFRPGVNPIGLHKVLEVSDSEFL 328


>ref|NP_200932.2| leucine-rich repeat-containing protein [Arabidopsis thaliana]
            gi|9757845|dbj|BAB08479.1| leucine-rich repeat disease
            resistance protein-like [Arabidopsis thaliana]
            gi|22135942|gb|AAM91553.1| Cf-5 disease resistance
            protein-like [Arabidopsis thaliana]
            gi|23197592|gb|AAN15323.1| Cf-5 disease resistance
            protein-like [Arabidopsis thaliana]
            gi|332010057|gb|AED97440.1| leucine-rich
            repeat-containing protein [Arabidopsis thaliana]
          Length = 326

 Score =  538 bits (1385), Expect = e-150
 Identities = 262/324 (80%), Positives = 286/324 (88%)
 Frame = -1

Query: 1228 MSSRSLITWLCFLSILVNFAHCKTLKRDVKALNEIKASLGWRVVYAWVXXXXXXXXXXXP 1049
            M+SR  +  +C  S+L+ FAH KTLKRDVKALNEIKASLGWRVVY+WV           P
Sbjct: 1    MASRCELLLICVFSLLIAFAHSKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDGDLPP 60

Query: 1048 WSGVTCSTQGDYRVVTELEVYAVSIVGPFPTAVTNLLDLTRLDLHNNKLTGPIPPQIGRL 869
            WSGVTCSTQGDYRVVTELEVYAVSIVGPFP AVTNLLDLTRLDLHNNKLTGPIPPQIGRL
Sbjct: 61   WSGVTCSTQGDYRVVTELEVYAVSIVGPFPIAVTNLLDLTRLDLHNNKLTGPIPPQIGRL 120

Query: 868  RRLKILNLRWNKLQDVIPPEIGELKQLTHLYLSFNSFKGEIPKELANLPELRYLYLHENR 689
            +RLK+LNLRWNKLQDVIPPEIGELK+LTHLYLSFNSFKGEIPKELA LPELRYLYL ENR
Sbjct: 121  KRLKVLNLRWNKLQDVIPPEIGELKRLTHLYLSFNSFKGEIPKELAALPELRYLYLQENR 180

Query: 688  FTGRVPAELGNLPHLRHLDVGNNHMVGTIRELIRLEGSFPALRNVYLNNNYLTGGIPAQL 509
              GR+PAELG L +LRHLDVGNNH+VGTIRELIR +GSFPALRN+YLNNNYL+GGIPAQL
Sbjct: 181  LIGRIPAELGTLQNLRHLDVGNNHLVGTIRELIRFDGSFPALRNLYLNNNYLSGGIPAQL 240

Query: 508  ANLTNLEILYLSYNKMSGTIPPGLAHIPRLTYLYLDHNQFSGRIPDALYKHPFLKEMYIE 329
            +NLTNLEI+YLSYNK  G IP  +AHIP+LTYLYLDHNQF+GRIPDA YKHPFLKEMYIE
Sbjct: 241  SNLTNLEIVYLSYNKFIGNIPFAIAHIPKLTYLYLDHNQFTGRIPDAFYKHPFLKEMYIE 300

Query: 328  VNGFRPGVKPIGAHKVLELSDSEF 257
             N F+ GV PIG HKVLE+SD++F
Sbjct: 301  GNMFKSGVNPIGTHKVLEVSDADF 324


>ref|XP_002864726.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297310561|gb|EFH40985.1| protein binding protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 326

 Score =  537 bits (1384), Expect = e-150
 Identities = 263/324 (81%), Positives = 285/324 (87%)
 Frame = -1

Query: 1228 MSSRSLITWLCFLSILVNFAHCKTLKRDVKALNEIKASLGWRVVYAWVXXXXXXXXXXXP 1049
            M+SR  +  +C  SIL  FAH KTLKRDVKALNEIKASLGWRVVY+WV           P
Sbjct: 1    MASRCELLLICIFSILFAFAHSKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDGDLPP 60

Query: 1048 WSGVTCSTQGDYRVVTELEVYAVSIVGPFPTAVTNLLDLTRLDLHNNKLTGPIPPQIGRL 869
            WSGVTCSTQGDYRVVTELEVYAVSIVGPFP AVTNLLDLTRLDLHNNKLTGPIPPQIGRL
Sbjct: 61   WSGVTCSTQGDYRVVTELEVYAVSIVGPFPIAVTNLLDLTRLDLHNNKLTGPIPPQIGRL 120

Query: 868  RRLKILNLRWNKLQDVIPPEIGELKQLTHLYLSFNSFKGEIPKELANLPELRYLYLHENR 689
            +RLK+LNLRWNKLQDVIPPEIGELK+LTHLYLSFNSFKGEIPKELA LPELRYLYL ENR
Sbjct: 121  KRLKVLNLRWNKLQDVIPPEIGELKRLTHLYLSFNSFKGEIPKELAALPELRYLYLQENR 180

Query: 688  FTGRVPAELGNLPHLRHLDVGNNHMVGTIRELIRLEGSFPALRNVYLNNNYLTGGIPAQL 509
              GR+PAELG L +LRHLDVGNNH+VGTIRELIR +GSFPALRN+YLNNNYL+GGIPAQL
Sbjct: 181  LIGRIPAELGTLQNLRHLDVGNNHLVGTIRELIRFDGSFPALRNLYLNNNYLSGGIPAQL 240

Query: 508  ANLTNLEILYLSYNKMSGTIPPGLAHIPRLTYLYLDHNQFSGRIPDALYKHPFLKEMYIE 329
            +NLTNLEI+YLSYNK  G IP  +AHIP+LTYLYLDHNQF+GRIPDA YKHPFLKEMYIE
Sbjct: 241  SNLTNLEIVYLSYNKFIGNIPFAIAHIPKLTYLYLDHNQFTGRIPDAFYKHPFLKEMYIE 300

Query: 328  VNGFRPGVKPIGAHKVLELSDSEF 257
             N F+ GV PIG HKVLE+SD++F
Sbjct: 301  GNMFKSGVNPIGTHKVLEVSDADF 324


>gb|AAK70805.1| leucine-rich repeat resistance protein-like protein [Gossypium
            hirsutum]
          Length = 328

 Score =  536 bits (1382), Expect = e-150
 Identities = 262/309 (84%), Positives = 280/309 (90%)
 Frame = -1

Query: 1180 VNFAHCKTLKRDVKALNEIKASLGWRVVYAWVXXXXXXXXXXXPWSGVTCSTQGDYRVVT 1001
            ++ A+ KTLKRDVKALNEIKASLGWRVVYAW+           PWSGVTCSTQGDYRVVT
Sbjct: 19   ISIANSKTLKRDVKALNEIKASLGWRVVYAWIGDDPCGDGDLPPWSGVTCSTQGDYRVVT 78

Query: 1000 ELEVYAVSIVGPFPTAVTNLLDLTRLDLHNNKLTGPIPPQIGRLRRLKILNLRWNKLQDV 821
            ELEVYAVSIVGPFP AVTNLLDLTRLDLHNNKLTGPIPPQIGRLRRL++LNLRWNKLQDV
Sbjct: 79   ELEVYAVSIVGPFPIAVTNLLDLTRLDLHNNKLTGPIPPQIGRLRRLRMLNLRWNKLQDV 138

Query: 820  IPPEIGELKQLTHLYLSFNSFKGEIPKELANLPELRYLYLHENRFTGRVPAELGNLPHLR 641
            +PPEI ELK+LTHL LSFN+FKGEIP+ELANLPELRYLYL ENRFTGRVPAELG L +LR
Sbjct: 139  LPPEICELKRLTHLSLSFNNFKGEIPRELANLPELRYLYLQENRFTGRVPAELGTLQNLR 198

Query: 640  HLDVGNNHMVGTIRELIRLEGSFPALRNVYLNNNYLTGGIPAQLANLTNLEILYLSYNKM 461
            HLDVGNNH+V TIRELIR+EG FP LRN+YLNNNYLTGGIPAQLANLTNLEILYLSYNKM
Sbjct: 199  HLDVGNNHLVSTIRELIRIEGGFPVLRNLYLNNNYLTGGIPAQLANLTNLEILYLSYNKM 258

Query: 460  SGTIPPGLAHIPRLTYLYLDHNQFSGRIPDALYKHPFLKEMYIEVNGFRPGVKPIGAHKV 281
            SG IP  LAHIP+LTYLYLDHNQFSGRIPDA YKHPFLKE+YIE N FRPGV PIGAHKV
Sbjct: 259  SGAIPTALAHIPKLTYLYLDHNQFSGRIPDAFYKHPFLKELYIEGNAFRPGVNPIGAHKV 318

Query: 280  LELSDSEFL 254
            LELSD++FL
Sbjct: 319  LELSDADFL 327


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