BLASTX nr result
ID: Coptis21_contig00012889
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00012889
(1326 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis... 689 0.0
ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [... 685 0.0
ref|XP_002301370.1| predicted protein [Populus trichocarpa] gi|2... 684 0.0
ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [... 681 0.0
ref|XP_002509850.1| polygalacturonase, putative [Ricinus communi... 672 0.0
>ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 689 bits (1777), Expect = 0.0
Identities = 328/424 (77%), Positives = 371/424 (87%), Gaps = 4/424 (0%)
Frame = -2
Query: 1325 FGGVGDGVTSNTNAFKSAIDNLSQFSNDGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 1146
FGGVGDG TSNT AF++AID+LSQF++DGGSQLFVPPG+WLTGSFNLTSHFTL+LHKDAV
Sbjct: 58 FGGVGDGTTSNTKAFQAAIDHLSQFASDGGSQLFVPPGRWLTGSFNLTSHFTLYLHKDAV 117
Query: 1145 LLASEDESEWPVIAPLPSYXXXXXXXXXRYISLIFGTNLTDVIVTGENATIDGQGAVWWQ 966
LLAS+DE EWPVI PLPSY RYISLIFGTNLTDV++TGEN TIDGQGA+WW
Sbjct: 118 LLASQDEHEWPVIDPLPSYGRGRDTQGGRYISLIFGTNLTDVVITGENGTIDGQGALWWA 177
Query: 965 KFKKGKLKYTRPYLIEIMYSDQVQISNVTFLNSPSWNVHPVYSSNVIIKGVTILAPIVPI 786
KF KG+LKYTRPYLIEIM+SD VQIS++T +NSPSWNVHPVYSSNVII+G+TI AP+
Sbjct: 178 KFHKGELKYTRPYLIEIMHSDNVQISSLTLVNSPSWNVHPVYSSNVIIQGLTITAPVT-- 235
Query: 785 SPNTDGINPDSCTNVLIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKHVVIRRLTCISPD 606
SPNTDGINPDSCTN IEDCYIVSGDDC+AVKSGWDEYGI++GMPTK +VIRRLTCISP
Sbjct: 236 SPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCISPF 295
Query: 605 SAVIALGSEMSGGIQDVRAEDILAINSESGIRIKTAVGRGGFVKDIYVRRMTMKTMKWAF 426
SA IALGSEMSGGI+DVRAEDILAI++ESG+RIKTAVGRGG+VKDIYVR M MKTMKWAF
Sbjct: 296 SATIALGSEMSGGIEDVRAEDILAIDTESGVRIKTAVGRGGYVKDIYVRSMIMKTMKWAF 355
Query: 425 WMTGNYGSHADKNYDPNALPIIDGISYTDMVADNVKMAARLEGIDGDPFTGICISNVTIE 246
WMTGNYGSHAD NYDPNALP I GI+Y DMVA+NV MA RLEGI GDPFTGICISNVTI
Sbjct: 356 WMTGNYGSHADNNYDPNALPAIQGINYRDMVAENVTMAGRLEGISGDPFTGICISNVTIG 415
Query: 245 MAPKAKKVPWTCTDVSGVTVGVSPKPCDALPEQ----VASCPFPSDSLPIESVEQKLCSF 78
+A KAKK PWTCTD++G+T GV P+PCD LP+Q + +C FP+DSLPI++VE + CS+
Sbjct: 416 LAKKAKKAPWTCTDIAGITSGVVPQPCDLLPDQGPEKIVACNFPTDSLPIDTVEVQTCSY 475
Query: 77 RASY 66
Y
Sbjct: 476 WGKY 479
>ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 685 bits (1768), Expect = 0.0
Identities = 321/421 (76%), Positives = 373/421 (88%), Gaps = 4/421 (0%)
Frame = -2
Query: 1325 FGGVGDGVTSNTNAFKSAIDNLSQFSNDGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 1146
FGGVGDG T NT AF++AID+LSQ+++ GGSQL+VPPGKWLTGSFNLTSHFTLFLHKDAV
Sbjct: 48 FGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQLYVPPGKWLTGSFNLTSHFTLFLHKDAV 107
Query: 1145 LLASEDESEWPVIAPLPSYXXXXXXXXXRYISLIFGTNLTDVIVTGENATIDGQGAVWWQ 966
+LAS+DE++WPVI PLPSY R+ SLIFGTNLTDVI+TG+N TIDGQG +WWQ
Sbjct: 108 ILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGTIDGQGDLWWQ 167
Query: 965 KFKKGKLKYTRPYLIEIMYSDQVQISNVTFLNSPSWNVHPVYSSNVIIKGVTILAPIVPI 786
KF+KG+LKYTRPYLIEIMYSD VQISN+T +NSPSWNVHP+YSSN++++G+TILAP+
Sbjct: 168 KFRKGELKYTRPYLIEIMYSDNVQISNLTLVNSPSWNVHPIYSSNLVVQGITILAPVT-- 225
Query: 785 SPNTDGINPDSCTNVLIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKHVVIRRLTCISPD 606
SPNTDGINPDSCTN IEDCYIVSGDDCVAVKSGWDEYGI++GMPTK +VIRRLTCISP
Sbjct: 226 SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPF 285
Query: 605 SAVIALGSEMSGGIQDVRAEDILAINSESGIRIKTAVGRGGFVKDIYVRRMTMKTMKWAF 426
SAVIALGSEMSGGIQDVRAEDI+AINSESG+RIKTAVGRGG+VKDI+VRRMTMKTMKWAF
Sbjct: 286 SAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKDIFVRRMTMKTMKWAF 345
Query: 425 WMTGNYGSHADKNYDPNALPIIDGISYTDMVADNVKMAARLEGIDGDPFTGICISNVTIE 246
WMTGNYGSHAD NYDPNALP+I I+Y DMVA+NV MAARLEGI GDPFTGICISNVTI+
Sbjct: 346 WMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVTIQ 405
Query: 245 MAPKAKKVPWTCTDVSGVTVGVSPKPCDALPEQ----VASCPFPSDSLPIESVEQKLCSF 78
+A KAKKVPWTCTD++G++ V+P PC LP+Q + +C FP +SLPIE ++ + C++
Sbjct: 406 LAKKAKKVPWTCTDIAGISSDVTPAPCGLLPDQGEEKIGACTFPEESLPIEDIKVQTCTY 465
Query: 77 R 75
R
Sbjct: 466 R 466
>ref|XP_002301370.1| predicted protein [Populus trichocarpa] gi|222843096|gb|EEE80643.1|
predicted protein [Populus trichocarpa]
Length = 470
Score = 684 bits (1765), Expect = 0.0
Identities = 327/424 (77%), Positives = 367/424 (86%), Gaps = 4/424 (0%)
Frame = -2
Query: 1325 FGGVGDGVTSNTNAFKSAIDNLSQFSNDGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 1146
FGGVGDG TSNT AFK AID+LSQFS+DGGSQLFVP GKWLTGSF+LTSHFTL+LHKDAV
Sbjct: 48 FGGVGDGTTSNTKAFKDAIDHLSQFSSDGGSQLFVPAGKWLTGSFSLTSHFTLYLHKDAV 107
Query: 1145 LLASEDESEWPVIAPLPSYXXXXXXXXXRYISLIFGTNLTDVIVTGENATIDGQGAVWWQ 966
LLAS+D EWPV+ PLPSY RY SLIFGTNLTDVI+TG N TIDGQGA WWQ
Sbjct: 108 LLASQDMQEWPVMKPLPSYGRGRDAAAGRYSSLIFGTNLTDVIITGNNGTIDGQGAFWWQ 167
Query: 965 KFKKGKLKYTRPYLIEIMYSDQVQISNVTFLNSPSWNVHPVYSSNVIIKGVTILAPIVPI 786
F KGKLKYTRPYLIEIM+SD +QISN+T LNSPSWNVHPVYS +++++G+TI+API
Sbjct: 168 NFHKGKLKYTRPYLIEIMFSDTIQISNLTLLNSPSWNVHPVYSRDILVQGITIIAPIS-- 225
Query: 785 SPNTDGINPDSCTNVLIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKHVVIRRLTCISPD 606
SPNTDGINPDSCTN IEDCYIVSGDDCVAVKSGWDEYGI+FGMPTK +VIRRLTCISP
Sbjct: 226 SPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPY 285
Query: 605 SAVIALGSEMSGGIQDVRAEDILAINSESGIRIKTAVGRGGFVKDIYVRRMTMKTMKWAF 426
SA IALGSEMSGGI+DVRAEDI AI++ESG+RIKTAVGRGG+VKDIYV+RMTM TMKW F
Sbjct: 286 SATIALGSEMSGGIEDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWVF 345
Query: 425 WMTGNYGSHADKNYDPNALPIIDGISYTDMVADNVKMAARLEGIDGDPFTGICISNVTIE 246
WMTGNYGSHADKNYDPNALP+I GI+Y DMVADNV MAARLEGI GDPF ICISNVTI
Sbjct: 346 WMTGNYGSHADKNYDPNALPLIQGINYRDMVADNVTMAARLEGIAGDPFKEICISNVTIG 405
Query: 245 MAPKAKKVPWTCTDVSGVTVGVSPKPCDALPEQ----VASCPFPSDSLPIESVEQKLCSF 78
+APKAKKVPWTCT++ G+T GVSP+PCD LP+Q + SC FP +++PI+ V+ K+CSF
Sbjct: 406 LAPKAKKVPWTCTEIEGMTSGVSPRPCDLLPDQGPEKITSCDFPPENIPIDLVQFKMCSF 465
Query: 77 RASY 66
SY
Sbjct: 466 GMSY 469
>ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 681 bits (1757), Expect = 0.0
Identities = 318/421 (75%), Positives = 371/421 (88%), Gaps = 4/421 (0%)
Frame = -2
Query: 1325 FGGVGDGVTSNTNAFKSAIDNLSQFSNDGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 1146
FGGVGDG T NT AF++AI+NLSQ++ GGSQL+VPPGKWLTGSFNLTSHFTLFLHKDAV
Sbjct: 73 FGGVGDGTTLNTKAFQAAIENLSQYAASGGSQLYVPPGKWLTGSFNLTSHFTLFLHKDAV 132
Query: 1145 LLASEDESEWPVIAPLPSYXXXXXXXXXRYISLIFGTNLTDVIVTGENATIDGQGAVWWQ 966
+LAS+DE++WPVI PLPSY R+ SLIFGTNLTDVI+TG+N TIDGQG +WWQ
Sbjct: 133 ILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGDNGTIDGQGDLWWQ 192
Query: 965 KFKKGKLKYTRPYLIEIMYSDQVQISNVTFLNSPSWNVHPVYSSNVIIKGVTILAPIVPI 786
KF KG+LKYTRPYL+EIMYSD VQISN+T +NSPSWNVHP+YSSNV+++G+TILAP+
Sbjct: 193 KFHKGELKYTRPYLVEIMYSDNVQISNLTLVNSPSWNVHPIYSSNVVVQGITILAPVT-- 250
Query: 785 SPNTDGINPDSCTNVLIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKHVVIRRLTCISPD 606
SPNTDGINPDSCT+ IEDCYIVSGDDCVAVKSGWDEYGI++GMPTK +VIRRLTCISP
Sbjct: 251 SPNTDGINPDSCTDTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPF 310
Query: 605 SAVIALGSEMSGGIQDVRAEDILAINSESGIRIKTAVGRGGFVKDIYVRRMTMKTMKWAF 426
SA IALGSEMSGGIQD+RAEDI+AIN+ESG+RIKTAVGRGG+VKDI+VRRMTMKTMKWAF
Sbjct: 311 SAAIALGSEMSGGIQDMRAEDIVAINTESGVRIKTAVGRGGYVKDIFVRRMTMKTMKWAF 370
Query: 425 WMTGNYGSHADKNYDPNALPIIDGISYTDMVADNVKMAARLEGIDGDPFTGICISNVTIE 246
WMTGNYGSHAD NYDPNALP+I I+Y DMVA+NV MAARLEGI GDPFTGICISNVTI+
Sbjct: 371 WMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVTIQ 430
Query: 245 MAPKAKKVPWTCTDVSGVTVGVSPKPCDALPEQ----VASCPFPSDSLPIESVEQKLCSF 78
+A KAKKVPWTCTD++G++ V+P PCD LP+Q + +C FP +SLPIE ++ + C++
Sbjct: 431 LAKKAKKVPWTCTDIAGISSDVTPAPCDLLPDQGEEKIGACTFPEESLPIEDIKVQTCTY 490
Query: 77 R 75
R
Sbjct: 491 R 491
>ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative
[Ricinus communis]
Length = 480
Score = 672 bits (1734), Expect = 0.0
Identities = 318/424 (75%), Positives = 362/424 (85%), Gaps = 4/424 (0%)
Frame = -2
Query: 1325 FGGVGDGVTSNTNAFKSAIDNLSQFSNDGGSQLFVPPGKWLTGSFNLTSHFTLFLHKDAV 1146
FGGVGDG TSNT AF++AID+LSQFS DGGSQL+VPPGKWLTGSFNLTSHFTLFL KDAV
Sbjct: 58 FGGVGDGQTSNTKAFQAAIDHLSQFSYDGGSQLYVPPGKWLTGSFNLTSHFTLFLDKDAV 117
Query: 1145 LLASEDESEWPVIAPLPSYXXXXXXXXXRYISLIFGTNLTDVIVTGENATIDGQGAVWWQ 966
LLAS+DESEWPVI PLPSY RY SLIFGTNLTDV++TG N TIDGQG +WW+
Sbjct: 118 LLASQDESEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGANGTIDGQGDLWWK 177
Query: 965 KFKKGKLKYTRPYLIEIMYSDQVQISNVTFLNSPSWNVHPVYSSNVIIKGVTILAPIVPI 786
KF G++ YTRPYLIEIMYS+ +QISN+T +NSPSWN+HP YSSNV+++G+TILAP+
Sbjct: 178 KFHNGEINYTRPYLIEIMYSNNIQISNLTLMNSPSWNIHPTYSSNVVVQGITILAPVN-- 235
Query: 785 SPNTDGINPDSCTNVLIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKHVVIRRLTCISPD 606
SPNTDGINPDSCTN IEDCYIVSGDDCVAVKSGWDEYGISFGMPTK +VIRRLTCISP
Sbjct: 236 SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPT 295
Query: 605 SAVIALGSEMSGGIQDVRAEDILAINSESGIRIKTAVGRGGFVKDIYVRRMTMKTMKWAF 426
SA IALGSEMSGGIQDVRAEDI IN+ESG+RIKT+VGRGG+VKDIYVR+MTM TMKW F
Sbjct: 296 SAAIALGSEMSGGIQDVRAEDITCINTESGVRIKTSVGRGGYVKDIYVRKMTMHTMKWVF 355
Query: 425 WMTGNYGSHADKNYDPNALPIIDGISYTDMVADNVKMAARLEGIDGDPFTGICISNVTIE 246
WMTGNYGSH D NYDPNA+P+I+ I+Y D+VA+NV MAARLEGI GDPFTGICISNVTI
Sbjct: 356 WMTGNYGSHPDNNYDPNAIPVIENINYRDIVAENVTMAARLEGIAGDPFTGICISNVTIG 415
Query: 245 MAPKAKKVPWTCTDVSGVTVGVSPKPCDALPEQ----VASCPFPSDSLPIESVEQKLCSF 78
+A K KK+ W CTD++G++ GV+PKPC LPEQ +A C FP DSLPIE++E K+CS
Sbjct: 416 LAQKPKKLQWNCTDIAGISSGVTPKPCSLLPEQEKEKIADCNFPEDSLPIENIEVKMCSS 475
Query: 77 RASY 66
Y
Sbjct: 476 SRKY 479