BLASTX nr result

ID: Coptis21_contig00012886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012886
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168893.1| PREDICTED: tryptophan--tRNA ligase, cytoplas...   398   e-109
ref|XP_004142265.1| PREDICTED: tryptophan--tRNA ligase, cytoplas...   398   e-109
ref|XP_002275626.1| PREDICTED: tryptophanyl-tRNA synthetase, cyt...   397   e-109
emb|CAN66126.1| hypothetical protein VITISV_027725 [Vitis vinifera]   395   e-108
ref|XP_002312840.1| predicted protein [Populus trichocarpa] gi|1...   394   e-108

>ref|XP_004168893.1| PREDICTED: tryptophan--tRNA ligase, cytoplasmic-like, partial
           [Cucumis sativus]
          Length = 389

 Score =  398 bits (1023), Expect = e-109
 Identities = 187/244 (76%), Positives = 217/244 (88%)
 Frame = +1

Query: 1   VFLRRGVFFAHREFDQILNAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAFKV 180
           VFLRRGVFFAHR+F++ILNAYE+G+KFYLYTGRGPSSE+LHLGHL+PF+FTKYLQDAFKV
Sbjct: 66  VFLRRGVFFAHRDFEEILNAYERGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKV 125

Query: 181 PLVIQLTDDEKSIWKNITVEESKRLARENAKDIIACGFDVNRTFIFSDFGYMGGAFYENV 360
           PLVIQLTDDEK +WKN++VEES+RLARENAKDIIACGFDV++TFIFSDF Y+GGAFY+N+
Sbjct: 126 PLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVSKTFIFSDFDYIGGAFYKNM 185

Query: 361 VRVAKCVSFNQVRGIFGFDNESNIGKIGFPPIQAVXXXXXXXXXXXXGESKLRCLIPCAI 540
           V+VAKCV++N+V GIFGF  E +IGK+ FPP+QAV            G+  LRCLIPCAI
Sbjct: 186 VKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDDLRCLIPCAI 245

Query: 541 DQDPYFRMTRDVAPRIGYDKPALIESLFFPALQGEAGKMSAGDPNSAIYLTDSDKMIRNK 720
           DQDPYFRMTRDVAPR+GY KPALIES FFPALQGE GKMSA DPNSAIY+TDS K I+NK
Sbjct: 246 DQDPYFRMTRDVAPRLGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKDIKNK 305

Query: 721 VNKH 732
           +NK+
Sbjct: 306 INKY 309


>ref|XP_004142265.1| PREDICTED: tryptophan--tRNA ligase, cytoplasmic-like [Cucumis
           sativus]
          Length = 405

 Score =  398 bits (1023), Expect = e-109
 Identities = 187/244 (76%), Positives = 217/244 (88%)
 Frame = +1

Query: 1   VFLRRGVFFAHREFDQILNAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAFKV 180
           VFLRRGVFFAHR+F++ILNAYE+G+KFYLYTGRGPSSE+LHLGHL+PF+FTKYLQDAFKV
Sbjct: 66  VFLRRGVFFAHRDFEEILNAYERGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKV 125

Query: 181 PLVIQLTDDEKSIWKNITVEESKRLARENAKDIIACGFDVNRTFIFSDFGYMGGAFYENV 360
           PLVIQLTDDEK +WKN++VEES+RLARENAKDIIACGFDV++TFIFSDF Y+GGAFY+N+
Sbjct: 126 PLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVSKTFIFSDFDYIGGAFYKNM 185

Query: 361 VRVAKCVSFNQVRGIFGFDNESNIGKIGFPPIQAVXXXXXXXXXXXXGESKLRCLIPCAI 540
           V+VAKCV++N+V GIFGF  E +IGK+ FPP+QAV            G+  LRCLIPCAI
Sbjct: 186 VKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDDLRCLIPCAI 245

Query: 541 DQDPYFRMTRDVAPRIGYDKPALIESLFFPALQGEAGKMSAGDPNSAIYLTDSDKMIRNK 720
           DQDPYFRMTRDVAPR+GY KPALIES FFPALQGE GKMSA DPNSAIY+TDS K I+NK
Sbjct: 246 DQDPYFRMTRDVAPRLGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKDIKNK 305

Query: 721 VNKH 732
           +NK+
Sbjct: 306 INKY 309


>ref|XP_002275626.1| PREDICTED: tryptophanyl-tRNA synthetase, cytoplasmic [Vitis
           vinifera] gi|302143316|emb|CBI21877.3| unnamed protein
           product [Vitis vinifera]
          Length = 399

 Score =  397 bits (1021), Expect = e-109
 Identities = 186/244 (76%), Positives = 216/244 (88%)
 Frame = +1

Query: 1   VFLRRGVFFAHREFDQILNAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAFKV 180
           VFLRRGVFFAHR+ +++L+AYE+GDKFYLYTGRGPSSE+LHLGHL+PF+FTKYLQDAFKV
Sbjct: 60  VFLRRGVFFAHRDLNEVLDAYERGDKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKV 119

Query: 181 PLVIQLTDDEKSIWKNITVEESKRLARENAKDIIACGFDVNRTFIFSDFGYMGGAFYENV 360
           PLVIQLTDDEK +WKN++VEES+RLARENAKDIIACGFD++RTFIFSDF Y+GGAFY+N+
Sbjct: 120 PLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISRTFIFSDFDYVGGAFYKNM 179

Query: 361 VRVAKCVSFNQVRGIFGFDNESNIGKIGFPPIQAVXXXXXXXXXXXXGESKLRCLIPCAI 540
           V+V KCV++N+V GIFGF  E +IGK+ FPP+QAV            G+  LRCLIPCAI
Sbjct: 180 VKVGKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDDLRCLIPCAI 239

Query: 541 DQDPYFRMTRDVAPRIGYDKPALIESLFFPALQGEAGKMSAGDPNSAIYLTDSDKMIRNK 720
           DQDPYFRMTRDVAPRIGY KPALIESLFFPALQGE GKMSA DPNSAIY+TDS K I+NK
Sbjct: 240 DQDPYFRMTRDVAPRIGYHKPALIESLFFPALQGETGKMSASDPNSAIYVTDSGKDIKNK 299

Query: 721 VNKH 732
           +NK+
Sbjct: 300 INKY 303


>emb|CAN66126.1| hypothetical protein VITISV_027725 [Vitis vinifera]
          Length = 399

 Score =  395 bits (1015), Expect = e-108
 Identities = 184/244 (75%), Positives = 215/244 (88%)
 Frame = +1

Query: 1   VFLRRGVFFAHREFDQILNAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAFKV 180
           +FLRRGVFFAHR+ +++L+AYE+GDKFYLYTGRGPSSE+LHLGHL+PF+FTKYLQDAFKV
Sbjct: 60  IFLRRGVFFAHRDLNEVLDAYERGDKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKV 119

Query: 181 PLVIQLTDDEKSIWKNITVEESKRLARENAKDIIACGFDVNRTFIFSDFGYMGGAFYENV 360
           PLVIQLTDDEK +WKN++VEES+RLARENAKDIIACGFD++RTFIFSDF Y+GGAFY+N+
Sbjct: 120 PLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISRTFIFSDFDYVGGAFYKNM 179

Query: 361 VRVAKCVSFNQVRGIFGFDNESNIGKIGFPPIQAVXXXXXXXXXXXXGESKLRCLIPCAI 540
           V+V KCV++N+V GIFGF  E +IGK+ FPP+QAV            G+  LRCLIPCAI
Sbjct: 180 VKVGKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDDLRCLIPCAI 239

Query: 541 DQDPYFRMTRDVAPRIGYDKPALIESLFFPALQGEAGKMSAGDPNSAIYLTDSDKMIRNK 720
           DQDPYFRMTRDVAPRIGY KPALIE LFFPALQGE GKMSA DPNSAIY+TDS K I+NK
Sbjct: 240 DQDPYFRMTRDVAPRIGYHKPALIEXLFFPALQGETGKMSASDPNSAIYVTDSGKDIKNK 299

Query: 721 VNKH 732
           +NK+
Sbjct: 300 INKY 303


>ref|XP_002312840.1| predicted protein [Populus trichocarpa] gi|118482985|gb|ABK93404.1|
           unknown [Populus trichocarpa]
           gi|222849248|gb|EEE86795.1| predicted protein [Populus
           trichocarpa]
          Length = 404

 Score =  394 bits (1013), Expect = e-108
 Identities = 185/244 (75%), Positives = 214/244 (87%)
 Frame = +1

Query: 1   VFLRRGVFFAHREFDQILNAYEKGDKFYLYTGRGPSSESLHLGHLIPFLFTKYLQDAFKV 180
           VFLRRGVFFAHR+F++IL+AYEKG KFYLYTGRGPSSE+LHLGHL+PF+FTKYLQD F+V
Sbjct: 65  VFLRRGVFFAHRDFNEILDAYEKGKKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDVFRV 124

Query: 181 PLVIQLTDDEKSIWKNITVEESKRLARENAKDIIACGFDVNRTFIFSDFGYMGGAFYENV 360
           PLVIQLTDDEK +WKN+TVEES+RLARENAKDIIACGFD+ RTFIFSDF Y+GGAFY+N+
Sbjct: 125 PLVIQLTDDEKCMWKNLTVEESQRLARENAKDIIACGFDITRTFIFSDFDYVGGAFYKNM 184

Query: 361 VRVAKCVSFNQVRGIFGFDNESNIGKIGFPPIQAVXXXXXXXXXXXXGESKLRCLIPCAI 540
           V+VAKCV+ N+V+GIFGF  E +IGKI FPP+QAV            G+  LRCLIPCAI
Sbjct: 185 VKVAKCVTLNKVQGIFGFSGEDHIGKISFPPVQAVPSFPSSFPHLFSGKDDLRCLIPCAI 244

Query: 541 DQDPYFRMTRDVAPRIGYDKPALIESLFFPALQGEAGKMSAGDPNSAIYLTDSDKMIRNK 720
           DQDPYFRMTRD APRIGY KP+LIES FFPALQGE GKMSA DPNSAIY+TDS K+I++K
Sbjct: 245 DQDPYFRMTRDAAPRIGYHKPSLIESTFFPALQGETGKMSASDPNSAIYVTDSAKVIKSK 304

Query: 721 VNKH 732
           +NK+
Sbjct: 305 INKY 308


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