BLASTX nr result

ID: Coptis21_contig00012878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012878
         (1660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284674.1| PREDICTED: uncharacterized protein LOC100247...   318   2e-84
ref|XP_002308629.1| predicted protein [Populus trichocarpa] gi|2...   304   5e-80
ref|XP_002516598.1| conserved hypothetical protein [Ricinus comm...   270   1e-69
ref|XP_002324258.1| predicted protein [Populus trichocarpa] gi|2...   270   1e-69
ref|XP_002299638.1| predicted protein [Populus trichocarpa] gi|2...   222   3e-55

>ref|XP_002284674.1| PREDICTED: uncharacterized protein LOC100247517 [Vitis vinifera]
          Length = 411

 Score =  318 bits (814), Expect(2) = 2e-84
 Identities = 189/378 (50%), Positives = 233/378 (61%), Gaps = 18/378 (4%)
 Frame = +3

Query: 18   MLRKRSRSVQKDQYKGHLIMSDSGSESNFQPEKLG---KNTSFFSVPGLFVGFSIKATSD 188
            MLRKRSRS QKDQ+ GH  M+D+ SE  FQ + +G   K  SFFSVPGLFVG + K  SD
Sbjct: 1    MLRKRSRSFQKDQHMGHPTMADAVSELYFQSDVMGQKHKGNSFFSVPGLFVGLNYKGLSD 60

Query: 189  YDSVRSPTSPLDFKLLTG---------NSRNGSPKSWDCSKVGLGIIDSLGDVKKSSEDV 341
             DSVRSPTSPLDF++ +          +S++G  KSWDCSKVGL IIDSL D  K S  V
Sbjct: 61   SDSVRSPTSPLDFRVFSNLGSPFRSPRSSQDGQHKSWDCSKVGLSIIDSLDDGGKLSGKV 120

Query: 342  VGLSSSRNILLGSQMRMNNFPSSQSRLYRSIDSSVAPKSLPNNYAIFPQPQNNDNLPGVQ 521
            +G S S+ IL G QMR+   P+S S +    D S   KSLP NYA FP  Q         
Sbjct: 121  LGSSESKTILFGPQMRIKT-PNSPSHI-NFFDGS---KSLPKNYASFPHTQIKSR----- 170

Query: 522  FSDWNNSEITGEMHS---EPNLFGMVRSDLSYTSKSMSRLTGLGYCNNNLSSESFWSDNI 692
                 +S++  E+     EP  FG +RS    +S+S S LT L    +NLSS +    N+
Sbjct: 171  -PQKRDSDVVFEIEETPLEPEAFGRIRSCSLDSSRSFSSLTNLTKRQSNLSSGNLCPGNM 229

Query: 693  T---KSGFLLIGEEPMKVDNFLGMKXXXXXXXXXXXXXXXXXXTASEIELSEDYTCIISH 863
            T    S   ++G  P   DNFL MK                  +ASEIELSEDYTC+ISH
Sbjct: 230  TTQVSSPPQILGGNP-NPDNFLPMKLNSIPASVGSGQGLIGSLSASEIELSEDYTCVISH 288

Query: 864  GPNPRTTHIFGDCVLECHTNELADCATKEEPGIGTPQALKCSNSSLAYPSDDFLSFCYFC 1043
            GPNP+TTHI+GDC+LECH+N+LA+    +E  IG+P  ++CS++S  YPS+DFLS CY C
Sbjct: 289  GPNPKTTHIYGDCILECHSNDLANHNKNDEHKIGSPLIVECSDNSTPYPSNDFLSICYSC 348

Query: 1044 KKKLEEGNDIYMYRGEKA 1097
            KKKLEEG DIYMYRGEKA
Sbjct: 349  KKKLEEGKDIYMYRGEKA 366



 Score = 23.5 bits (49), Expect(2) = 2e-84
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 1202 MDQPVINSSGESPKSTCSDDIF 1267
            M++   +SS +SP S C +D+F
Sbjct: 383  MEKTTDDSSEKSPVSKCGEDLF 404


>ref|XP_002308629.1| predicted protein [Populus trichocarpa] gi|222854605|gb|EEE92152.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  304 bits (778), Expect = 5e-80
 Identities = 180/370 (48%), Positives = 227/370 (61%), Gaps = 14/370 (3%)
 Frame = +3

Query: 18   MLRKRSRSVQKDQYKGHLIMSDSGSESNFQPEKLGKN---TSFFSVPGLFVGFSIKATSD 188
            MLRKR+RS+QKDQ  G L MSDSGSES+FQ + +G N    SFF+VPGLFVG S+K  SD
Sbjct: 1    MLRKRTRSLQKDQQMGQLTMSDSGSESHFQSDNMGHNHKANSFFTVPGLFVGSSLKGLSD 60

Query: 189  YDSVRSPTSPLDFKLLTG---------NSRNGSPKSWDCSKVGLGIIDSLGDVKKSSEDV 341
             DSVRSPTSPLDF++ +          +S  G  KSWDC+KVGL I+DSL D  K S  V
Sbjct: 61   CDSVRSPTSPLDFRMFSNIGNPSKSPRSSHGGQRKSWDCNKVGLSIVDSLDDDGKGSGKV 120

Query: 342  VGLSSSRNILLGSQMRMNNFPSSQSRLYRSIDSSVAPKSLPNNYAIFPQPQNNDNLPGVQ 521
            +  S S+NIL G ++R    P+ QSR     DS  APKSLP N+AIFP+       P ++
Sbjct: 121  LRSSESKNILFGPRVRSKT-PNFQSRT----DSFQAPKSLPRNFAIFPRTLTKS--PLLK 173

Query: 522  FSDWNNSEITGEMHSEPNLFGMVRSDLSYTSKSMSRLTGLGYCNNNLSSESFWSDNITKS 701
             S     EI GE  S+   FG +RS    + +S S L+ L   N+  SS +F  DN+T  
Sbjct: 174  GSSDVLFEI-GEDPSDSEPFGKIRSCSLDSCRSFSSLSRLAGQNSKASSGNFCLDNVTTR 232

Query: 702  GFL--LIGEEPMKVDNFLGMKXXXXXXXXXXXXXXXXXXTASEIELSEDYTCIISHGPNP 875
            G    L G  P   +NF                      +ASEIELSEDYTC+ISHGPNP
Sbjct: 233  GECPQLFGGSPNS-NNFSNTNLTFTPMSVSSGNGFIGSLSASEIELSEDYTCVISHGPNP 291

Query: 876  RTTHIFGDCVLECHTNELADCATKEEPGIGTPQALKCSNSSLAYPSDDFLSFCYFCKKKL 1055
            +TTHI+GDC+LEC +N+L++    E   IG PQA+ CS    ++PS+ FLSFCY+C KKL
Sbjct: 292  KTTHIYGDCILECQSNDLSNFGKNEAKEIGLPQAVTCSKIPGSFPSEVFLSFCYYCNKKL 351

Query: 1056 EEGNDIYMYR 1085
            +EG DIY+YR
Sbjct: 352  DEGKDIYIYR 361


>ref|XP_002516598.1| conserved hypothetical protein [Ricinus communis]
            gi|223544418|gb|EEF45939.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 435

 Score =  270 bits (689), Expect = 1e-69
 Identities = 172/383 (44%), Positives = 223/383 (58%), Gaps = 22/383 (5%)
 Frame = +3

Query: 15   IMLRKRSRSVQKDQYKGHLIMSDSGSESNFQPEKLG---KNTSFFSVPGLFVGFSIKATS 185
            +MLRKR+RS+QKDQ  G L MSDSGS+ N Q + LG   K TSFF+VPGLFVG S K  S
Sbjct: 26   VMLRKRTRSLQKDQQMGPLTMSDSGSQFNSQSDCLGYNHKRTSFFNVPGLFVGLSPKGMS 85

Query: 186  DYDSVRSPTSPLDFKLLTG----------NSRNGSPKSWDCSKVGLGIIDSLGDVK---K 326
            D DSVRSPTSPLD +L +           +S+NG  KSWDCSKVGL I++SL D     K
Sbjct: 86   DCDSVRSPTSPLDLRLFSNLGNSSYRSPRSSQNGHQKSWDCSKVGLSIVNSLDDEDDDTK 145

Query: 327  SSEDVVGLSSSRNILLGSQMRMNNFPSSQSRLYRSIDSSVAPKSLPNNYAIFPQPQNNDN 506
             S  V+  S S+NIL G ++R+   P+ Q     + +S  APKSLP N+AI P      +
Sbjct: 146  VSGKVLRSSESKNILFGQKVRIKT-PTFQV----NANSFEAPKSLPRNFAILPHSYTKSS 200

Query: 507  LPGVQFSDWNNSEIT---GEMHSEPNLFGMVRSDLSYTSKSMSRLTGLGYCNNNLSSESF 677
            L          S++    GE  +EP  FG +RS    + KS S L+ L   N+N+   +F
Sbjct: 201  LQK------GCSKVIFEIGEAPTEPEHFGKIRSCSLDSCKSFSTLSRLANRNSNVICGNF 254

Query: 678  WSDNI---TKSGFLLIGEEPMKVDNFLGMKXXXXXXXXXXXXXXXXXXTASEIELSEDYT 848
              +N+   T S     G  P + +N L M                   +ASEIELSEDYT
Sbjct: 255  PLNNVATGTSSPLQFSGGSPPQSNNSLHMDLNLPPAGSTSGFVGSL--SASEIELSEDYT 312

Query: 849  CIISHGPNPRTTHIFGDCVLECHTNELADCATKEEPGIGTPQALKCSNSSLAYPSDDFLS 1028
            C+ISHGPN + THI+GDCVLEC++NE  +        I  PQA+  S     +PS+DFL+
Sbjct: 313  CVISHGPNAKKTHIYGDCVLECYSNEGKE--------IRMPQAITSSIIPSPFPSNDFLN 364

Query: 1029 FCYFCKKKLEEGNDIYMYRGEKA 1097
            FCY+C ++L+ G DIY+YRGEKA
Sbjct: 365  FCYYCNRRLDGGKDIYIYRGEKA 387


>ref|XP_002324258.1| predicted protein [Populus trichocarpa] gi|222865692|gb|EEF02823.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  270 bits (689), Expect = 1e-69
 Identities = 167/380 (43%), Positives = 214/380 (56%), Gaps = 25/380 (6%)
 Frame = +3

Query: 18   MLRKRSRSVQKDQYKGHLIMSDSGSESNFQPEK-LG---KNTSFFSVPGLFVGFSIKATS 185
            MLRKR+RS++KDQ  G L MSDSGSES FQP+  +G   K  SFF+VPGLFVG S K  S
Sbjct: 1    MLRKRTRSLKKDQQTGQLTMSDSGSESYFQPDNNMGHSHKANSFFTVPGLFVGLSHKGLS 60

Query: 186  DYDSVRSPTSPLDFKLLTG---------NSRNGSPKSWDCSKVGLGIIDSLGDVKKSSED 338
            D DSVRSPTSPLD ++ +          +S  G  KSWDC+KVGL I+DSL D     + 
Sbjct: 61   DCDSVRSPTSPLDSRMFSNIGNPHKSLRSSHGGQQKSWDCNKVGLSILDSLDDDDDDDDG 120

Query: 339  -----VVGLSSSRNILLGSQMRMNNFPSSQSRLYRSIDSSVAPKSLPNNYAIFPQPQNND 503
                 V+  S S+NIL G ++R     S  +      D   APKSLP N+AIFP+     
Sbjct: 121  KGYGKVLQSSESKNILFGPRVR-----SKTANFQSHTDPFQAPKSLPRNFAIFPRTLTKS 175

Query: 504  NLPGVQFSDWNNSEIT---GEMHSEPNLFGMVRSDLSYTSKSMSRLTGLGYCNNNLSSES 674
             L        ++S++    GE   E   FG +RS    + +S S ++ L   N   SS +
Sbjct: 176  PLQK------DSSDVLFEIGEGPFESETFGRIRSCSLDSCRSFSSMSRLAGQNLKASSLN 229

Query: 675  FWSDNITKS----GFLLIGEEPMKVDNFLGMKXXXXXXXXXXXXXXXXXXTASEIELSED 842
            F   NIT        LL G      +NF                      +ASEIELSED
Sbjct: 230  FSLHNITTQVDCPPQLLGGSS--NTNNFSNTNLTYTPMSASSGNGFISSLSASEIELSED 287

Query: 843  YTCIISHGPNPRTTHIFGDCVLECHTNELADCATKEEPGIGTPQALKCSNSSLAYPSDDF 1022
            YTC+ISHGPNP+TTHI+G C+LECH+N+ ++    +E  IG  QA  CS    ++PS+DF
Sbjct: 288  YTCVISHGPNPKTTHIYGGCILECHSNDFSNFGKNKEKEIGLAQAATCSKIPSSFPSEDF 347

Query: 1023 LSFCYFCKKKLEEGNDIYMY 1082
            LSFCY+C KKL+EG DIY+Y
Sbjct: 348  LSFCYYCNKKLDEGKDIYIY 367


>ref|XP_002299638.1| predicted protein [Populus trichocarpa] gi|222846896|gb|EEE84443.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  222 bits (565), Expect = 3e-55
 Identities = 142/356 (39%), Positives = 185/356 (51%), Gaps = 16/356 (4%)
 Frame = +3

Query: 75   MSDSGSESNFQPEKLGKN---TSFFSVPGLFVGFSIKATSDYDSVRSPTSPLDFKLLTGN 245
            M+DS +E+N QP+        +SFF++PG FVG   + + D+DSVRSP SPLDF   T  
Sbjct: 1    MADSDTETNSQPDTFSLRHLRSSFFNIPGFFVGCGYRGSQDFDSVRSPQSPLDFSFFTNL 60

Query: 246  SR---NGSP--------KSWDCSKVGLGIIDSLGDVKKSSEDVVGLSSSRNILLGSQMRM 392
            S    N SP        K WDC+KVGLGI+  L D  K + +V+     + I+   Q++ 
Sbjct: 61   SNPFSNRSPRLPCQNVQKKWDCNKVGLGIVHLLVDETKPTGEVLDSDKRKTIIFAPQVKT 120

Query: 393  NNFPSSQSRLYRSIDSSVAPKSLPNNYAIFPQPQNNDNLPGVQFSDWNNSEITGEMHSEP 572
                           SSV   SLP NY I        +L   + S     +  G   SE 
Sbjct: 121  F--------------SSVKSNSLPRNYTI--------SLSRTKTSSPRLGKSDGAFGSE- 157

Query: 573  NLFGMVRSDLSYTSKSMSRLTGLGYCNNNLSSESFWSDNITKS--GFLLIGEEPMKVDNF 746
               G++     + S S+    GL     NLSS+ F+S+NIT S   F L   +  + +  
Sbjct: 158  ---GVLLETKPFESSSV---IGLATSKPNLSSQKFYSENITTSTRSFPLEICDCSQTNKS 211

Query: 747  LGMKXXXXXXXXXXXXXXXXXXTASEIELSEDYTCIISHGPNPRTTHIFGDCVLECHTNE 926
            L +K                  +A EIELSEDYTCIISHGPNP+TTH+FGD +LECH+NE
Sbjct: 212  LVIKPNSLPITVGSGQGYVGSLSAREIELSEDYTCIISHGPNPKTTHVFGDYILECHSNE 271

Query: 927  LADCATKEEPGIGTPQALKCSNSSLAYPSDDFLSFCYFCKKKLEEGNDIYMYRGEK 1094
            L++    E PGI  PQ  K       +P D+F SFCY CKKKLE+  DIYMYRGEK
Sbjct: 272  LSNFDKTENPGIKLPQEAKHPKHPTPFPPDEFFSFCYSCKKKLEKAEDIYMYRGEK 327


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