BLASTX nr result

ID: Coptis21_contig00012877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012877
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517215.1| Mavicyanin, putative [Ricinus communis] gi|2...   147   5e-33
ref|XP_002308685.1| predicted protein [Populus trichocarpa] gi|2...   145   2e-32
ref|XP_002338337.1| predicted protein [Populus trichocarpa] gi|2...   144   3e-32
ref|XP_002308684.1| predicted protein [Populus trichocarpa] gi|2...   144   3e-32
ref|XP_002301365.1| predicted protein [Populus trichocarpa] gi|2...   144   3e-32

>ref|XP_002517215.1| Mavicyanin, putative [Ricinus communis] gi|223543850|gb|EEF45378.1|
           Mavicyanin, putative [Ricinus communis]
          Length = 200

 Score =  147 bits (370), Expect = 5e-33
 Identities = 71/146 (48%), Positives = 88/146 (60%)
 Frame = -3

Query: 776 GVVHIVGDATGWTTIGGFNYTAWAASKSFHVGDTIVFNYNPAFHNVMQVRRLSFSACNVT 597
           G V+ VGDA GWT+IG  +Y  WAA+K+F VGD IVF YN  FHNVM+V    + ACN +
Sbjct: 22  GTVYKVGDAGGWTSIGNLDYKQWAATKTFKVGDVIVFKYNSQFHNVMRVTHAMYKACNAS 81

Query: 596 SPLATYTSGKDSIAIKKTGHYFYLCGVPGHCQSGQKVDIRVLTRTXXXXXXXXXXXXXXX 417
           +PLATYT+G DSI IK  GH+++ CGVPGHCQ GQKVDI V                   
Sbjct: 82  APLATYTTGNDSITIKNRGHHYFFCGVPGHCQGGQKVDINVPRSDEELSPTPSASASASA 141

Query: 416 XPKTSDSGAPGSNPTVIPRSNAPVPS 339
              T  S +  ++P V P +  P PS
Sbjct: 142 STSTPTSSSAATSPPV-PAAKVPGPS 166


>ref|XP_002308685.1| predicted protein [Populus trichocarpa] gi|222854661|gb|EEE92208.1|
           predicted protein [Populus trichocarpa]
          Length = 107

 Score =  145 bits (365), Expect = 2e-32
 Identities = 60/103 (58%), Positives = 81/103 (78%)
 Frame = -3

Query: 770 VHIVGDATGWTTIGGFNYTAWAASKSFHVGDTIVFNYNPAFHNVMQVRRLSFSACNVTSP 591
           V+ VGD+ GWT++G  +Y  WAASK+FHVGDT+VFNYN  FHNV Q  +  F ACN TSP
Sbjct: 3   VYQVGDSAGWTSMGQVDYQEWAASKNFHVGDTLVFNYNNQFHNVKQATQQGFEACNATSP 62

Query: 590 LATYTSGKDSIAIKKTGHYFYLCGVPGHCQSGQKVDIRVLTRT 462
           +ATYT+G D++ ++K GH++++CG PGHCQ+GQK+DI V + T
Sbjct: 63  IATYTNGYDTVTLEKLGHFYFICGYPGHCQAGQKIDILVSSPT 105


>ref|XP_002338337.1| predicted protein [Populus trichocarpa] gi|222871932|gb|EEF09063.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score =  144 bits (363), Expect = 3e-32
 Identities = 59/103 (57%), Positives = 80/103 (77%)
 Frame = -3

Query: 770 VHIVGDATGWTTIGGFNYTAWAASKSFHVGDTIVFNYNPAFHNVMQVRRLSFSACNVTSP 591
           V+ VGD+ GWT++G  +Y  WAA+K+FHVGDT+VFNYN  FHNV QV    F +CN TSP
Sbjct: 4   VYQVGDSAGWTSMGQVDYQDWAANKNFHVGDTLVFNYNNQFHNVKQVTHQGFESCNATSP 63

Query: 590 LATYTSGKDSIAIKKTGHYFYLCGVPGHCQSGQKVDIRVLTRT 462
           +ATYT+G D++ ++K GH++++CG PGHCQ+GQK+DI V   T
Sbjct: 64  IATYTNGSDTVTLEKLGHFYFICGYPGHCQAGQKIDILVAPAT 106


>ref|XP_002308684.1| predicted protein [Populus trichocarpa] gi|222854660|gb|EEE92207.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score =  144 bits (363), Expect = 3e-32
 Identities = 60/103 (58%), Positives = 81/103 (78%)
 Frame = -3

Query: 770 VHIVGDATGWTTIGGFNYTAWAASKSFHVGDTIVFNYNPAFHNVMQVRRLSFSACNVTSP 591
           V+ VGD+ GWT++G  +Y  WAASK+FHVGDT+VFNYN  FHNV QV +  F ACN TSP
Sbjct: 4   VYQVGDSAGWTSMGQVDYQEWAASKNFHVGDTLVFNYNSQFHNVKQVTQQGFEACNATSP 63

Query: 590 LATYTSGKDSIAIKKTGHYFYLCGVPGHCQSGQKVDIRVLTRT 462
           +ATYT+G D++ ++K GH++++CG PGHCQ GQ++DI V + T
Sbjct: 64  IATYTNGYDTVTLEKLGHFYFICGYPGHCQVGQQIDILVSSPT 106


>ref|XP_002301365.1| predicted protein [Populus trichocarpa] gi|222843091|gb|EEE80638.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  144 bits (363), Expect = 3e-32
 Identities = 59/103 (57%), Positives = 80/103 (77%)
 Frame = -3

Query: 770 VHIVGDATGWTTIGGFNYTAWAASKSFHVGDTIVFNYNPAFHNVMQVRRLSFSACNVTSP 591
           V+ VGD+ GWT++G  +Y  WAA+K+FHVGDT+VFNYN  FHNV QV    F +CN TSP
Sbjct: 6   VYQVGDSAGWTSMGQVDYQDWAANKNFHVGDTLVFNYNNQFHNVKQVTHQGFESCNATSP 65

Query: 590 LATYTSGKDSIAIKKTGHYFYLCGVPGHCQSGQKVDIRVLTRT 462
           +ATYT+G D++ ++K GH++++CG PGHCQ+GQK+DI V   T
Sbjct: 66  IATYTNGSDTVTLEKLGHFYFICGYPGHCQAGQKIDILVAPAT 108


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