BLASTX nr result

ID: Coptis21_contig00012874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012874
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302598.1| predicted protein [Populus trichocarpa] gi|2...   278   1e-72
ref|XP_002320817.1| predicted protein [Populus trichocarpa] gi|2...   268   1e-69
ref|XP_002275850.1| PREDICTED: putative UDP-rhamnose:rhamnosyltr...   253   6e-65
ref|XP_002275824.1| PREDICTED: putative UDP-rhamnose:rhamnosyltr...   251   2e-64
ref|XP_002275802.1| PREDICTED: putative UDP-rhamnose:rhamnosyltr...   250   3e-64

>ref|XP_002302598.1| predicted protein [Populus trichocarpa] gi|222844324|gb|EEE81871.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  278 bits (711), Expect = 1e-72
 Identities = 132/248 (53%), Positives = 182/248 (73%), Gaps = 6/248 (2%)
 Frame = +2

Query: 227 LHVVLLPWLAFGHMIPFFHLSSSLAKAGIRVSFISTPRNIQRLPEIPAELEPLFNFVQFH 406
           LH+V+ PW AFGH++PFFH S +LA+AG+ VSF+STPRNIQRLP I   L PL N V+  
Sbjct: 5   LHIVIFPWSAFGHILPFFHFSKALAEAGVHVSFVSTPRNIQRLPAISPTLAPLINLVELP 64

Query: 407 LPSVD---GLPIGAEATVDLTMDQTQLLKVSYDLMDTQFKAFISKETVDWIILDFAPYWA 577
            P++D   GLP GAEAT D+  ++ Q LK++YDL+   FK F+++++ +WII+DF  +WA
Sbjct: 65  FPALDVKYGLPEGAEATADIPAEKIQYLKIAYDLLQHPFKQFVAEKSPNWIIVDFCSHWA 124

Query: 578 VDIAREKSIPLTMFSVYSSVITAFFGHPDFLTAEEQKDRTW---ESLTSPPKWITFPSTV 748
           VDIA+E  IPL   S++S V+ AF GHP +   + QK R W   ESLTSPP+WITFPS+V
Sbjct: 125 VDIAKEYGIPLIYLSIFSGVMGAFMGHPGYFVGDGQK-RYWGSPESLTSPPEWITFPSSV 183

Query: 749 AFRPFEAKVIFVGAFETNASAKTDAERLSEVLSACQAVAMRTCKEYEGEYFDVAKKVYRQ 928
           AFR +EAK ++ G +  NAS   DAER+++ +S CQA+A+R+C E+EGEY DV +K+  +
Sbjct: 184 AFRSYEAKNMYPGIYGENASGIRDAERVAKTVSGCQAIAVRSCIEFEGEYMDVYQKIMSK 243

Query: 929 AVIPVGLI 952
            VIP+GL+
Sbjct: 244 QVIPIGLL 251


>ref|XP_002320817.1| predicted protein [Populus trichocarpa] gi|222861590|gb|EEE99132.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  268 bits (685), Expect = 1e-69
 Identities = 129/249 (51%), Positives = 179/249 (71%), Gaps = 5/249 (2%)
 Frame = +2

Query: 221 EPLHVVLLPWLAFGHMIPFFHLSSSLAKAGIRVSFISTPRNIQRLPEIPAELEPLFNFVQ 400
           E LH+V+LPW+AFGHMIPFF LS  LAKAGI+VSF+STPRNI+RLP+IP  L  L  FV+
Sbjct: 3   EKLHIVMLPWIAFGHMIPFFQLSIDLAKAGIKVSFVSTPRNIKRLPKIPPSLADLVKFVE 62

Query: 401 FHLPSVDG--LPIGAEATVDLTMDQTQLLKVSYDLMDTQFKAFISKETVDWIILDFAPYW 574
           F LPS+D   LP   EATVD+  ++ + LK++YDL+    K FI+ +  DWII+D  PYW
Sbjct: 63  FPLPSLDNDILPEDGEATVDIPAEKIEYLKIAYDLLQHPLKQFIADQLPDWIIIDMIPYW 122

Query: 575 AVDIAREKSIPLTMFSVYSSVITAFFGHPDFLTAEEQKDR---TWESLTSPPKWITFPST 745
            V+IAR+K +PL  FSV+S+V   F GHP+ L   + + R   +W S+TS P+W+ FPS+
Sbjct: 123 MVEIARDKKVPLIHFSVFSAVAYVFLGHPECLLVGDGQKRLRPSWTSMTSKPEWVDFPSS 182

Query: 746 VAFRPFEAKVIFVGAFETNASAKTDAERLSEVLSACQAVAMRTCKEYEGEYFDVAKKVYR 925
           VA+R  EA  +F   ++ NAS  TD ER+S++L  CQA+A+R+C E+EG+Y ++ ++V  
Sbjct: 183 VAYRNHEAVGVFEWIYKGNASGITDGERVSKILHGCQALAVRSCAEFEGDYLNLFERVIG 242

Query: 926 QAVIPVGLI 952
           + VIPVGL+
Sbjct: 243 KPVIPVGLL 251


>ref|XP_002275850.1| PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Vitis
           vinifera]
          Length = 468

 Score =  253 bits (645), Expect = 6e-65
 Identities = 125/246 (50%), Positives = 175/246 (71%), Gaps = 4/246 (1%)
 Frame = +2

Query: 227 LHVVLLPWLAFGHMIPFFHLSSSLAKAGIRVSFISTPRNIQRLPEIPAELEPLFNFVQFH 406
           LHVV++PWLAFGHMIPF  LS +LAKAG+RVSF+STPRNI+RLP++P +LEPL +FV+  
Sbjct: 4   LHVVMVPWLAFGHMIPFLQLSIALAKAGVRVSFVSTPRNIRRLPKLPPDLEPLISFVELP 63

Query: 407 LPSVDG--LPIGAEATVDLTMDQTQLLKVSYDLMDTQFKAFISKETVDWIILDFAPYWAV 580
           LP+VDG  LP  AEATVD+  ++ Q LK++YDL+   FK F++ ++ DWII D   +W V
Sbjct: 64  LPAVDGGLLPEDAEATVDVPTEKIQYLKLAYDLLQHPFKKFVADQSPDWIISDTMAHWVV 123

Query: 581 DIAREKSIPLTMFSVYSSVITAFFGHPDFLTAEEQK--DRTWESLTSPPKWITFPSTVAF 754
           + A E  IP   F ++SS    F G  + L  E ++    + ESLTS P+W++FPS+VAF
Sbjct: 124 ETAEEHRIPSMAFILFSSAAAVFVGPNECLIGEGRRRVRPSPESLTSSPEWVSFPSSVAF 183

Query: 755 RPFEAKVIFVGAFETNASAKTDAERLSEVLSACQAVAMRTCKEYEGEYFDVAKKVYRQAV 934
           R +EA+  + G F  N S  TDA R+++V  AC+AVA+R+C E+EGEY ++ +K+  + V
Sbjct: 184 RGYEARTCYAGFFGENVSGITDAHRVAKVCHACKAVAVRSCIEFEGEYLNIHEKIMGKPV 243

Query: 935 IPVGLI 952
           IPVG +
Sbjct: 244 IPVGFL 249


>ref|XP_002275824.1| PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Vitis
           vinifera]
          Length = 465

 Score =  251 bits (640), Expect = 2e-64
 Identities = 121/244 (49%), Positives = 173/244 (70%), Gaps = 2/244 (0%)
 Frame = +2

Query: 227 LHVVLLPWLAFGHMIPFFHLSSSLAKAGIRVSFISTPRNIQRLPEIPAELEPLFNFVQFH 406
           +HVV++PWLAFGHMIP   L+ +LA+AGI VSFISTPRNIQRLP++   L PL N V   
Sbjct: 5   MHVVMVPWLAFGHMIPHLQLAIALAEAGIHVSFISTPRNIQRLPKLSPTLLPLINLVALP 64

Query: 407 LPSVDGLPIGAEATVDLTMDQTQLLKVSYDLMDTQFKAFISKETVDWIILDFAPYWAVDI 586
           LP+V GLP G EATV+L  ++ + LK++Y L+    K F+   + DW+I+D    WA + 
Sbjct: 65  LPAVLGLPEGCEATVELPFEKIKYLKIAYALLKQPLKRFLEGASPDWMIVDLPVDWAAEA 124

Query: 587 AREKSIPLTMFSVYSSVITAFFGHPDFLTAEEQK--DRTWESLTSPPKWITFPSTVAFRP 760
           ARE ++PL  F++++S    FFG P++LT + Q+    + ES+T+PP+W+TFPS VA+R 
Sbjct: 125 ARECAVPLLAFTMFTSASNVFFGPPEYLTGDGQRRVRPSPESMTTPPEWVTFPSLVAYRE 184

Query: 761 FEAKVIFVGAFETNASAKTDAERLSEVLSACQAVAMRTCKEYEGEYFDVAKKVYRQAVIP 940
           FEA+    G +  N+S  TDA+R++  LSAC AVA+R+C+E+EGEY  + +K+ R+ VIP
Sbjct: 185 FEARGAHPGFYGDNSSGTTDADRIATTLSACDAVAIRSCREFEGEYLSIYQKMLRKPVIP 244

Query: 941 VGLI 952
           VGL+
Sbjct: 245 VGLL 248


>ref|XP_002275802.1| PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Vitis
           vinifera]
          Length = 473

 Score =  250 bits (639), Expect = 3e-64
 Identities = 124/247 (50%), Positives = 171/247 (69%), Gaps = 5/247 (2%)
 Frame = +2

Query: 227 LHVVLLPWLAFGHMIPFFHLSSSLAKAGIRVSFISTPRNIQRLPEIPAELEPLFNFVQFH 406
           +HVV+LPW AFGHMIPFFHL+ ++AKAGIRVS +STPRNIQRLP+ P  L  L  FV+  
Sbjct: 5   MHVVMLPWSAFGHMIPFFHLAIAIAKAGIRVSLVSTPRNIQRLPKPPPNLSSLIKFVELP 64

Query: 407 LPSVDG---LPIGAEATVDLTMDQTQLLKVSYDLMDTQFKAFISKETVDWIILDFAPYWA 577
            P ++    LP GAEATVD+  ++ Q LK + DL+   FK +++  + DWII+DF  +W 
Sbjct: 65  FPVMENGSILPEGAEATVDMPFEKIQYLKAALDLLQHPFKQYVADTSPDWIIIDFFSHWV 124

Query: 578 VDIAREKSIPLTMFSVYSSVITAFFGHPDFLTAEEQKDR--TWESLTSPPKWITFPSTVA 751
             IARE  +PL  FSV+S+   AF G    L  + ++    + ES+TSPP+WI+FPS+VA
Sbjct: 125 SSIAREHGVPLVYFSVFSASTLAFLGPAYSLVGDGRRRLRPSPESMTSPPEWISFPSSVA 184

Query: 752 FRPFEAKVIFVGAFETNASAKTDAERLSEVLSACQAVAMRTCKEYEGEYFDVAKKVYRQA 931
           F+ +EAK ++ G F  NAS  TDA R  E++++CQAVA+R+C EYEGEY ++   +  + 
Sbjct: 185 FKGYEAKAVYSGFFTDNASGTTDAARYVEIINSCQAVAVRSCVEYEGEYLNLLGNLMGKP 244

Query: 932 VIPVGLI 952
           VIPVGL+
Sbjct: 245 VIPVGLL 251


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