BLASTX nr result
ID: Coptis21_contig00012871
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00012871
(2226 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308965.1| predicted protein [Populus trichocarpa] gi|2... 682 0.0
ref|XP_002526724.1| DNA-binding protein smubp-2, putative [Ricin... 677 0.0
ref|XP_003553421.1| PREDICTED: DNA-binding protein SMUBP-2-like ... 676 0.0
ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like ... 676 0.0
emb|CBI29875.3| unnamed protein product [Vitis vinifera] 676 0.0
>ref|XP_002308965.1| predicted protein [Populus trichocarpa] gi|222854941|gb|EEE92488.1|
predicted protein [Populus trichocarpa]
Length = 647
Score = 682 bits (1761), Expect = 0.0
Identities = 350/408 (85%), Positives = 380/408 (93%)
Frame = +2
Query: 2 FGTHDVVVLKPNKADVGSPSLGQGVVYRLKDSSITVAFEDIPEDGLNSTLRLEKVANEIT 181
FGTHDVVVLKPNKAD+GSP+LGQGVVYRLKDSSITVAF+DIP++GLNS LRLEKVANE+T
Sbjct: 89 FGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPDEGLNSPLRLEKVANEVT 148
Query: 182 FRRMKDTLIQLSKGVHKGPAADLVPVLFGERSPTVAKKESSFTLFNSNLDHSQKDAISKA 361
+RRMKD LIQLSKGVH+GPAADL+PVLFGER PT++KK+ +FT NS+LDHSQKDAISKA
Sbjct: 149 YRRMKDALIQLSKGVHRGPAADLIPVLFGERQPTMSKKDVTFTPINSHLDHSQKDAISKA 208
Query: 362 LSSKNLFLLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLV 541
LSSKN+FLLH VVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLV
Sbjct: 209 LSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLV 268
Query: 542 RLGHPARLLPQVLESALDAQVLRGDNSALANDIRKEMKALNGKLLKTKDRNTKRDIRKEL 721
RLGHPARLLPQVL+SALDAQVLRGDNSALANDIRKEMKALNGKLLKTKD++T+RDI+KEL
Sbjct: 269 RLGHPARLLPQVLDSALDAQVLRGDNSALANDIRKEMKALNGKLLKTKDKSTRRDIQKEL 328
Query: 722 RTLSKEERKRQQLAVTDVIKSADVVLTTLTGASSHKLESTSFDLVIIDEAAQALEIACWI 901
RTLSKEERKRQQLAV DVIK+ADVVLTTLTGA SHKL +TSFDLVIIDEAAQALEI CW+
Sbjct: 329 RTLSKEERKRQQLAVIDVIKNADVVLTTLTGAFSHKLNTTSFDLVIIDEAAQALEITCWL 388
Query: 902 ALLKGSRCILAGDHLQLPPTIQSDEAARKGLGRTLFERLAGLYGDEVMAMLTVQYRMHEL 1081
ALLKGSRCILAGDHLQLPPTIQS EA +KGLGRTLFERL LYGDEV +MLTVQYRMHEL
Sbjct: 389 ALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLTDLYGDEVTSMLTVQYRMHEL 448
Query: 1082 IMEYSSKELYDSKLKAHSSVAAHMLYDLENVKRSSSTEPTLLLIDIAG 1225
IM +SSKELY+SK+KAH SVAAHML+DLE VKRSSSTEPTLLL+DIAG
Sbjct: 449 IMNWSSKELYNSKIKAHPSVAAHMLFDLEGVKRSSSTEPTLLLVDIAG 496
Score = 272 bits (696), Expect = 2e-70
Identities = 135/151 (89%), Positives = 145/151 (96%)
Frame = +2
Query: 1433 CDMEEKKDEEDSTMNEGEADVAIAHARRLIQSGVQSSDIGIIAPYAAQVVLLRIIRSKDD 1612
CDMEEKKDEEDSTMNEGEA+VA+AHA+RL+QSGVQ+SDIGII PYAAQVVLLRI+++ DD
Sbjct: 497 CDMEEKKDEEDSTMNEGEAEVAVAHAKRLVQSGVQASDIGIITPYAAQVVLLRILKNNDD 556
Query: 1613 KLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLRDQRRMNVAVTRARRQCCLVCDT 1792
KLKD+EISTVDGFQGREKEAIIISMVRSNSKKEVGFL D RRMNVAVTRARRQCCLVCDT
Sbjct: 557 KLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRARRQCCLVCDT 616
Query: 1793 ETVSSDGFLKRLIEHFEENGEYLSASEYGNE 1885
ETVS DGFLKRLIEHFEE+GEYLSASEY NE
Sbjct: 617 ETVSGDGFLKRLIEHFEEHGEYLSASEYLNE 647
>ref|XP_002526724.1| DNA-binding protein smubp-2, putative [Ricinus communis]
gi|223533913|gb|EEF35638.1| DNA-binding protein smubp-2,
putative [Ricinus communis]
Length = 644
Score = 677 bits (1746), Expect = 0.0
Identities = 349/408 (85%), Positives = 381/408 (93%)
Frame = +2
Query: 2 FGTHDVVVLKPNKADVGSPSLGQGVVYRLKDSSITVAFEDIPEDGLNSTLRLEKVANEIT 181
F THDVVVLKPNKAD+GSP+LGQGVVYRLKDSSITVAF+DIPE+GLNS LRLEKVANE+T
Sbjct: 86 FSTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKVANEVT 145
Query: 182 FRRMKDTLIQLSKGVHKGPAADLVPVLFGERSPTVAKKESSFTLFNSNLDHSQKDAISKA 361
+RRM++ LIQLSKGV +GPAADLVPVLFGER PT++KK +FT FNSNLDHSQKDAISKA
Sbjct: 146 YRRMREALIQLSKGVQRGPAADLVPVLFGERQPTMSKKGVTFTPFNSNLDHSQKDAISKA 205
Query: 362 LSSKNLFLLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLV 541
LSSK++FLLH VVEIILQEVKRG+KILACAASNIAVDNIVERLVPHRVKLV
Sbjct: 206 LSSKDVFLLHGPPGTGKTTTVVEIILQEVKRGAKILACAASNIAVDNIVERLVPHRVKLV 265
Query: 542 RLGHPARLLPQVLESALDAQVLRGDNSALANDIRKEMKALNGKLLKTKDRNTKRDIRKEL 721
RLGHPARLLPQVL+SALDAQVL+GDNS+LANDIRKEMKALNGKLLKTKD++T+RDI+KEL
Sbjct: 266 RLGHPARLLPQVLDSALDAQVLKGDNSSLANDIRKEMKALNGKLLKTKDKSTRRDIQKEL 325
Query: 722 RTLSKEERKRQQLAVTDVIKSADVVLTTLTGASSHKLESTSFDLVIIDEAAQALEIACWI 901
RTLSKEERKRQQLAVTDVIK+ADVVLTTLTGA SHKL++TSFDLVIIDEAAQALEIACWI
Sbjct: 326 RTLSKEERKRQQLAVTDVIKNADVVLTTLTGALSHKLDNTSFDLVIIDEAAQALEIACWI 385
Query: 902 ALLKGSRCILAGDHLQLPPTIQSDEAARKGLGRTLFERLAGLYGDEVMAMLTVQYRMHEL 1081
ALLKGSRCILAGDHLQLPPTIQS EA +KGLGRTLFERLA LYGDEV +MLTVQYRMHEL
Sbjct: 386 ALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLADLYGDEVTSMLTVQYRMHEL 445
Query: 1082 IMEYSSKELYDSKLKAHSSVAAHMLYDLENVKRSSSTEPTLLLIDIAG 1225
IM +SSKELY+SK+KAH S+AAHML DLE VKRSS+TEPTLLLIDIAG
Sbjct: 446 IMTWSSKELYNSKIKAHPSIAAHMLSDLEGVKRSSATEPTLLLIDIAG 493
Score = 267 bits (682), Expect = 1e-68
Identities = 130/151 (86%), Positives = 147/151 (97%)
Frame = +2
Query: 1433 CDMEEKKDEEDSTMNEGEADVAIAHARRLIQSGVQSSDIGIIAPYAAQVVLLRIIRSKDD 1612
CDMEEKKDEE+ST+NEGEADVA+AHA+RL+++GVQ+SDIGII PYAAQVVLL+I+RS +D
Sbjct: 494 CDMEEKKDEEESTLNEGEADVAVAHAKRLVENGVQASDIGIITPYAAQVVLLKILRSNED 553
Query: 1613 KLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLRDQRRMNVAVTRARRQCCLVCDT 1792
KLKD+EISTVDGFQGREKEAIIISMVRSNSKKEVGFL D+RRMNVAVTRARRQCCLVCDT
Sbjct: 554 KLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 613
Query: 1793 ETVSSDGFLKRLIEHFEENGEYLSASEYGNE 1885
ETV+SDGFLKRLIE+FEE+GEYLSA+EY NE
Sbjct: 614 ETVTSDGFLKRLIEYFEEHGEYLSAAEYCNE 644
>ref|XP_003553421.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 648
Score = 676 bits (1745), Expect = 0.0
Identities = 346/408 (84%), Positives = 377/408 (92%)
Frame = +2
Query: 2 FGTHDVVVLKPNKADVGSPSLGQGVVYRLKDSSITVAFEDIPEDGLNSTLRLEKVANEIT 181
FGTHDVVVLK NKAD+GSP+LGQGVVYRLKDSSITVAF+DIPEDGLNS LRLEKVANE+T
Sbjct: 90 FGTHDVVVLKLNKADLGSPALGQGVVYRLKDSSITVAFDDIPEDGLNSPLRLEKVANEVT 149
Query: 182 FRRMKDTLIQLSKGVHKGPAADLVPVLFGERSPTVAKKESSFTLFNSNLDHSQKDAISKA 361
+RRMKD LIQLSKGVHKGPA+DL+PVLFGER P V+KK+ SFT FN NLDHSQK+A+SKA
Sbjct: 150 YRRMKDALIQLSKGVHKGPASDLIPVLFGERPPAVSKKDVSFTPFNKNLDHSQKEAVSKA 209
Query: 362 LSSKNLFLLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLV 541
LSSKN+FLLH VVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLV
Sbjct: 210 LSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLV 269
Query: 542 RLGHPARLLPQVLESALDAQVLRGDNSALANDIRKEMKALNGKLLKTKDRNTKRDIRKEL 721
RLGHPARLLPQVL+SALDAQVLRGDNS LANDIRKEMKALNGKLLKTKDRNT++DI++EL
Sbjct: 270 RLGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKALNGKLLKTKDRNTRKDIQREL 329
Query: 722 RTLSKEERKRQQLAVTDVIKSADVVLTTLTGASSHKLESTSFDLVIIDEAAQALEIACWI 901
RTLSKEERKRQQLAVTDV+KSADV+LTTL GA S KL+STSFDLVIIDEAAQALEIACWI
Sbjct: 330 RTLSKEERKRQQLAVTDVLKSADVILTTLIGAFSKKLDSTSFDLVIIDEAAQALEIACWI 389
Query: 902 ALLKGSRCILAGDHLQLPPTIQSDEAARKGLGRTLFERLAGLYGDEVMAMLTVQYRMHEL 1081
LLKGSRC+LAGDHLQLPPTIQS EA +KGLGRTLFERLA +YGDE+ +MLTVQYRMHEL
Sbjct: 390 PLLKGSRCVLAGDHLQLPPTIQSVEAEKKGLGRTLFERLAEVYGDEITSMLTVQYRMHEL 449
Query: 1082 IMEYSSKELYDSKLKAHSSVAAHMLYDLENVKRSSSTEPTLLLIDIAG 1225
IM++SSKELY+SK+KAH SV AHMLYDLE VKR++STEPTLLLID AG
Sbjct: 450 IMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRTTSTEPTLLLIDTAG 497
Score = 256 bits (654), Expect = 2e-65
Identities = 126/151 (83%), Positives = 141/151 (93%)
Frame = +2
Query: 1433 CDMEEKKDEEDSTMNEGEADVAIAHARRLIQSGVQSSDIGIIAPYAAQVVLLRIIRSKDD 1612
CDMEEKKDEEDST NEGEA+V +AHA+RL+QSGV SDIGII PYAAQVVLL+++++K+D
Sbjct: 498 CDMEEKKDEEDSTFNEGEAEVTVAHAKRLVQSGVIPSDIGIITPYAAQVVLLKMLKNKED 557
Query: 1613 KLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLRDQRRMNVAVTRARRQCCLVCDT 1792
+LKD+EISTVDGFQGREKEAIIISMVRSNSKKEVGFL D RRMNVAVTR+RRQCCLV DT
Sbjct: 558 RLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRSRRQCCLVSDT 617
Query: 1793 ETVSSDGFLKRLIEHFEENGEYLSASEYGNE 1885
ETVS DGFLKRLIE+FEE+GEYLSASEY NE
Sbjct: 618 ETVSGDGFLKRLIEYFEEHGEYLSASEYQNE 648
>ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like [Vitis vinifera]
Length = 647
Score = 676 bits (1743), Expect = 0.0
Identities = 350/408 (85%), Positives = 378/408 (92%)
Frame = +2
Query: 2 FGTHDVVVLKPNKADVGSPSLGQGVVYRLKDSSITVAFEDIPEDGLNSTLRLEKVANEIT 181
FGTHDVVVLKPNKAD+GSP+LGQGVVYRLKDSSITVAF+DIPE+GLNS LRLEKVANE+T
Sbjct: 89 FGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKVANEVT 148
Query: 182 FRRMKDTLIQLSKGVHKGPAADLVPVLFGERSPTVAKKESSFTLFNSNLDHSQKDAISKA 361
+RRMKD L+QLSKGVHKGP ADL+PVLFGER PTV+KK+ +FT FNSNLD SQKDAISKA
Sbjct: 149 YRRMKDALVQLSKGVHKGPTADLIPVLFGERPPTVSKKDVTFTPFNSNLDRSQKDAISKA 208
Query: 362 LSSKNLFLLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLV 541
LSSKN+FLLH VVEIILQEVKRG+KILACAASNIAVDNIVERLVP+RVKLV
Sbjct: 209 LSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGAKILACAASNIAVDNIVERLVPYRVKLV 268
Query: 542 RLGHPARLLPQVLESALDAQVLRGDNSALANDIRKEMKALNGKLLKTKDRNTKRDIRKEL 721
RLGHPARLLPQVLESALDAQVLRGDN+ LANDIRKEMKALNGKLLKTKD+NT+RDIRKEL
Sbjct: 269 RLGHPARLLPQVLESALDAQVLRGDNTGLANDIRKEMKALNGKLLKTKDKNTRRDIRKEL 328
Query: 722 RTLSKEERKRQQLAVTDVIKSADVVLTTLTGASSHKLESTSFDLVIIDEAAQALEIACWI 901
+TLSKEERKRQQLAVTDVIK+A+VVLTTLTGA S KLE+ SFDLVIIDEAAQALEIACWI
Sbjct: 329 KTLSKEERKRQQLAVTDVIKNANVVLTTLTGAVSRKLENISFDLVIIDEAAQALEIACWI 388
Query: 902 ALLKGSRCILAGDHLQLPPTIQSDEAARKGLGRTLFERLAGLYGDEVMAMLTVQYRMHEL 1081
ALLKGSRCILAGDHLQLPPTIQS EA +KGLGRTLFERLA LYGDEVM+MLTVQYRMHEL
Sbjct: 389 ALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLADLYGDEVMSMLTVQYRMHEL 448
Query: 1082 IMEYSSKELYDSKLKAHSSVAAHMLYDLENVKRSSSTEPTLLLIDIAG 1225
IM +SSKELY+SK+ AH SVAAHML DLE+VK+SSSTE TLLLID AG
Sbjct: 449 IMNWSSKELYNSKITAHPSVAAHMLSDLEDVKKSSSTESTLLLIDTAG 496
Score = 263 bits (671), Expect = 2e-67
Identities = 129/151 (85%), Positives = 144/151 (95%)
Frame = +2
Query: 1433 CDMEEKKDEEDSTMNEGEADVAIAHARRLIQSGVQSSDIGIIAPYAAQVVLLRIIRSKDD 1612
CDMEEKKDEEDSTMNEGEA+VAI+HA+RL+ SGVQ+SDIGII PYAAQVVLL+++++ DD
Sbjct: 497 CDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITPYAAQVVLLKMMKNNDD 556
Query: 1613 KLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLRDQRRMNVAVTRARRQCCLVCDT 1792
KLKD+EISTVDGFQGREKEAIIISM RSN KKEVGFL D+RRMNVAVTRARRQCCLVCDT
Sbjct: 557 KLKDMEISTVDGFQGREKEAIIISMARSNPKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 616
Query: 1793 ETVSSDGFLKRLIEHFEENGEYLSASEYGNE 1885
ETV+SD FLKRLIE+FEENGEYLSASEYG+E
Sbjct: 617 ETVTSDKFLKRLIEYFEENGEYLSASEYGHE 647
>emb|CBI29875.3| unnamed protein product [Vitis vinifera]
Length = 647
Score = 676 bits (1743), Expect = 0.0
Identities = 350/408 (85%), Positives = 378/408 (92%)
Frame = +2
Query: 2 FGTHDVVVLKPNKADVGSPSLGQGVVYRLKDSSITVAFEDIPEDGLNSTLRLEKVANEIT 181
FGTHDVVVLKPNKAD+GSP+LGQGVVYRLKDSSITVAF+DIPE+GLNS LRLEKVANE+T
Sbjct: 89 FGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDDIPEEGLNSPLRLEKVANEVT 148
Query: 182 FRRMKDTLIQLSKGVHKGPAADLVPVLFGERSPTVAKKESSFTLFNSNLDHSQKDAISKA 361
+RRMKD L+QLSKGVHKGP ADL+PVLFGER PTV+KK+ +FT FNSNLD SQKDAISKA
Sbjct: 149 YRRMKDALVQLSKGVHKGPTADLIPVLFGERPPTVSKKDVTFTPFNSNLDRSQKDAISKA 208
Query: 362 LSSKNLFLLHXXXXXXXXXXVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLV 541
LSSKN+FLLH VVEIILQEVKRG+KILACAASNIAVDNIVERLVP+RVKLV
Sbjct: 209 LSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGAKILACAASNIAVDNIVERLVPYRVKLV 268
Query: 542 RLGHPARLLPQVLESALDAQVLRGDNSALANDIRKEMKALNGKLLKTKDRNTKRDIRKEL 721
RLGHPARLLPQVLESALDAQVLRGDN+ LANDIRKEMKALNGKLLKTKD+NT+RDIRKEL
Sbjct: 269 RLGHPARLLPQVLESALDAQVLRGDNTGLANDIRKEMKALNGKLLKTKDKNTRRDIRKEL 328
Query: 722 RTLSKEERKRQQLAVTDVIKSADVVLTTLTGASSHKLESTSFDLVIIDEAAQALEIACWI 901
+TLSKEERKRQQLAVTDVIK+A+VVLTTLTGA S KLE+ SFDLVIIDEAAQALEIACWI
Sbjct: 329 KTLSKEERKRQQLAVTDVIKNANVVLTTLTGAVSRKLENISFDLVIIDEAAQALEIACWI 388
Query: 902 ALLKGSRCILAGDHLQLPPTIQSDEAARKGLGRTLFERLAGLYGDEVMAMLTVQYRMHEL 1081
ALLKGSRCILAGDHLQLPPTIQS EA +KGLGRTLFERLA LYGDEVM+MLTVQYRMHEL
Sbjct: 389 ALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLADLYGDEVMSMLTVQYRMHEL 448
Query: 1082 IMEYSSKELYDSKLKAHSSVAAHMLYDLENVKRSSSTEPTLLLIDIAG 1225
IM +SSKELY+SK+ AH SVAAHML DLE+VK+SSSTE TLLLID AG
Sbjct: 449 IMNWSSKELYNSKITAHPSVAAHMLSDLEDVKKSSSTESTLLLIDTAG 496
Score = 263 bits (671), Expect = 2e-67
Identities = 129/151 (85%), Positives = 144/151 (95%)
Frame = +2
Query: 1433 CDMEEKKDEEDSTMNEGEADVAIAHARRLIQSGVQSSDIGIIAPYAAQVVLLRIIRSKDD 1612
CDMEEKKDEEDSTMNEGEA+VAI+HA+RL+ SGVQ+SDIGII PYAAQVVLL+++++ DD
Sbjct: 497 CDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITPYAAQVVLLKMMKNNDD 556
Query: 1613 KLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLRDQRRMNVAVTRARRQCCLVCDT 1792
KLKD+EISTVDGFQGREKEAIIISM RSN KKEVGFL D+RRMNVAVTRARRQCCLVCDT
Sbjct: 557 KLKDMEISTVDGFQGREKEAIIISMARSNPKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 616
Query: 1793 ETVSSDGFLKRLIEHFEENGEYLSASEYGNE 1885
ETV+SD FLKRLIE+FEENGEYLSASEYG+E
Sbjct: 617 ETVTSDKFLKRLIEYFEENGEYLSASEYGHE 647