BLASTX nr result
ID: Coptis21_contig00012846
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00012846 (582 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|2... 113 3e-23 dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba] 112 6e-23 ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [C... 111 8e-23 ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis ... 109 3e-22 ref|NP_001236904.1| uncharacterized protein LOC100499851 [Glycin... 107 1e-21 >ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|222873562|gb|EEF10693.1| predicted protein [Populus trichocarpa] Length = 136 Score = 113 bits (282), Expect = 3e-23 Identities = 50/66 (75%), Positives = 58/66 (87%) Frame = +3 Query: 3 KRMGLNFDRIKYWLSVGAQPSEPVQRILFRAGVLPPLPMLAMEHKNGPREIRPIDPLNGK 182 KRMGLNF+R+KYWLSVGAQPSEPVQRILFRAGVLPP PM+ M K GPR+ RP+DP+ G+ Sbjct: 50 KRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGR 109 Query: 183 FLVPKK 200 FL P+K Sbjct: 110 FLSPEK 115 >dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba] Length = 136 Score = 112 bits (279), Expect = 6e-23 Identities = 49/66 (74%), Positives = 58/66 (87%) Frame = +3 Query: 3 KRMGLNFDRIKYWLSVGAQPSEPVQRILFRAGVLPPLPMLAMEHKNGPREIRPIDPLNGK 182 KRMGLNF+R+KYWLSVGAQPSEPVQRILFRAG+LPP PM+ M K GPR+ RP+DP+ G+ Sbjct: 50 KRMGLNFERVKYWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGR 109 Query: 183 FLVPKK 200 FL P+K Sbjct: 110 FLSPEK 115 >ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [Cucumis sativus] Length = 127 Score = 111 bits (278), Expect = 8e-23 Identities = 48/67 (71%), Positives = 60/67 (89%) Frame = +3 Query: 3 KRMGLNFDRIKYWLSVGAQPSEPVQRILFRAGVLPPLPMLAMEHKNGPREIRPIDPLNGK 182 KRMGLNF+R+KYWLSVGAQPS+PVQRILFR+G+LPP PM+AM K GPR+ RP+DPL+G+ Sbjct: 50 KRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDTRPVDPLSGR 109 Query: 183 FLVPKKR 203 F+ P K+ Sbjct: 110 FVTPAKK 116 >ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis vinifera] gi|297738652|emb|CBI27897.3| unnamed protein product [Vitis vinifera] Length = 136 Score = 109 bits (273), Expect = 3e-22 Identities = 49/72 (68%), Positives = 59/72 (81%) Frame = +3 Query: 3 KRMGLNFDRIKYWLSVGAQPSEPVQRILFRAGVLPPLPMLAMEHKNGPREIRPIDPLNGK 182 KRMGLNFDR+KYWLSVGAQPS+PVQ+ILFRAG+LPP PM+AM K G R+ RP+DPL G+ Sbjct: 50 KRMGLNFDRVKYWLSVGAQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGR 109 Query: 183 FLVPKKRADEDE 218 L P K D ++ Sbjct: 110 ILTPNKPTDVEQ 121 >ref|NP_001236904.1| uncharacterized protein LOC100499851 [Glycine max] gi|255627125|gb|ACU13907.1| unknown [Glycine max] Length = 132 Score = 107 bits (267), Expect = 1e-21 Identities = 49/69 (71%), Positives = 58/69 (84%) Frame = +3 Query: 3 KRMGLNFDRIKYWLSVGAQPSEPVQRILFRAGVLPPLPMLAMEHKNGPREIRPIDPLNGK 182 KRMGLNFDR+KYWLSVGAQPSEPV+R+LFRAG+LPP PM+AM K GPR+ RP+D L G+ Sbjct: 50 KRMGLNFDRVKYWLSVGAQPSEPVERLLFRAGMLPPPPMVAMGRKGGPRDTRPVDALTGR 109 Query: 183 FLVPKKRAD 209 L +K AD Sbjct: 110 VLHQEKPAD 118