BLASTX nr result

ID: Coptis21_contig00012846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012846
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|2...   113   3e-23
dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]              112   6e-23
ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [C...   111   8e-23
ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis ...   109   3e-22
ref|NP_001236904.1| uncharacterized protein LOC100499851 [Glycin...   107   1e-21

>ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|222873562|gb|EEF10693.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  113 bits (282), Expect = 3e-23
 Identities = 50/66 (75%), Positives = 58/66 (87%)
 Frame = +3

Query: 3   KRMGLNFDRIKYWLSVGAQPSEPVQRILFRAGVLPPLPMLAMEHKNGPREIRPIDPLNGK 182
           KRMGLNF+R+KYWLSVGAQPSEPVQRILFRAGVLPP PM+ M  K GPR+ RP+DP+ G+
Sbjct: 50  KRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGR 109

Query: 183 FLVPKK 200
           FL P+K
Sbjct: 110 FLSPEK 115


>dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]
          Length = 136

 Score =  112 bits (279), Expect = 6e-23
 Identities = 49/66 (74%), Positives = 58/66 (87%)
 Frame = +3

Query: 3   KRMGLNFDRIKYWLSVGAQPSEPVQRILFRAGVLPPLPMLAMEHKNGPREIRPIDPLNGK 182
           KRMGLNF+R+KYWLSVGAQPSEPVQRILFRAG+LPP PM+ M  K GPR+ RP+DP+ G+
Sbjct: 50  KRMGLNFERVKYWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGR 109

Query: 183 FLVPKK 200
           FL P+K
Sbjct: 110 FLSPEK 115


>ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [Cucumis sativus]
          Length = 127

 Score =  111 bits (278), Expect = 8e-23
 Identities = 48/67 (71%), Positives = 60/67 (89%)
 Frame = +3

Query: 3   KRMGLNFDRIKYWLSVGAQPSEPVQRILFRAGVLPPLPMLAMEHKNGPREIRPIDPLNGK 182
           KRMGLNF+R+KYWLSVGAQPS+PVQRILFR+G+LPP PM+AM  K GPR+ RP+DPL+G+
Sbjct: 50  KRMGLNFERVKYWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDTRPVDPLSGR 109

Query: 183 FLVPKKR 203
           F+ P K+
Sbjct: 110 FVTPAKK 116


>ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis vinifera]
           gi|297738652|emb|CBI27897.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  109 bits (273), Expect = 3e-22
 Identities = 49/72 (68%), Positives = 59/72 (81%)
 Frame = +3

Query: 3   KRMGLNFDRIKYWLSVGAQPSEPVQRILFRAGVLPPLPMLAMEHKNGPREIRPIDPLNGK 182
           KRMGLNFDR+KYWLSVGAQPS+PVQ+ILFRAG+LPP PM+AM  K G R+ RP+DPL G+
Sbjct: 50  KRMGLNFDRVKYWLSVGAQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGR 109

Query: 183 FLVPKKRADEDE 218
            L P K  D ++
Sbjct: 110 ILTPNKPTDVEQ 121


>ref|NP_001236904.1| uncharacterized protein LOC100499851 [Glycine max]
           gi|255627125|gb|ACU13907.1| unknown [Glycine max]
          Length = 132

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/69 (71%), Positives = 58/69 (84%)
 Frame = +3

Query: 3   KRMGLNFDRIKYWLSVGAQPSEPVQRILFRAGVLPPLPMLAMEHKNGPREIRPIDPLNGK 182
           KRMGLNFDR+KYWLSVGAQPSEPV+R+LFRAG+LPP PM+AM  K GPR+ RP+D L G+
Sbjct: 50  KRMGLNFDRVKYWLSVGAQPSEPVERLLFRAGMLPPPPMVAMGRKGGPRDTRPVDALTGR 109

Query: 183 FLVPKKRAD 209
            L  +K AD
Sbjct: 110 VLHQEKPAD 118