BLASTX nr result
ID: Coptis21_contig00012832
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00012832 (371 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519105.1| Protein ariadne-1, putative [Ricinus communi... 80 1e-13 ref|XP_003631625.1| PREDICTED: probable E3 ubiquitin-protein lig... 79 4e-13 ref|XP_002313070.1| predicted protein [Populus trichocarpa] gi|2... 79 4e-13 ref|XP_002284665.1| PREDICTED: probable E3 ubiquitin-protein lig... 79 4e-13 ref|XP_004145339.1| PREDICTED: probable E3 ubiquitin-protein lig... 77 1e-12 >ref|XP_002519105.1| Protein ariadne-1, putative [Ricinus communis] gi|223541768|gb|EEF43316.1| Protein ariadne-1, putative [Ricinus communis] Length = 592 Score = 80.5 bits (197), Expect = 1e-13 Identities = 49/104 (47%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Frame = +1 Query: 61 SFDGIENDD-DGWTKPSKNPTCQVITRESLIAAQREXXXXXXXXXXXXXXXXXXXXXXXX 237 S DGIEN++ D P K PT ++IT+ESL+AAQRE Sbjct: 20 SLDGIENEESDFHWAPPKGPTTKIITKESLLAAQRE------------------------ 55 Query: 238 AAQREDLRRVMELLGLSEQHARTLLIHHRWDYQKLLADLVEKEK 369 DLRRVMELL L E HARTLLIH+RWD ++L A VEK K Sbjct: 56 -----DLRRVMELLSLREHHARTLLIHYRWDVERLFAVFVEKGK 94 >ref|XP_003631625.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1 isoform 2 [Vitis vinifera] Length = 573 Score = 79.0 bits (193), Expect = 4e-13 Identities = 47/104 (45%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Frame = +1 Query: 61 SFDGIENDDDGWT-KPSKNPTCQVITRESLIAAQREXXXXXXXXXXXXXXXXXXXXXXXX 237 SFDG+ N++ + P K P+ QVIT+ESL+ AQR+ Sbjct: 18 SFDGLVNEESDFQWVPPKAPSSQVITKESLLTAQRD------------------------ 53 Query: 238 AAQREDLRRVMELLGLSEQHARTLLIHHRWDYQKLLADLVEKEK 369 DLRRVM+LL L E HARTLLIHHRWD +KL A +VEK K Sbjct: 54 -----DLRRVMDLLSLREHHARTLLIHHRWDVEKLFAVMVEKGK 92 >ref|XP_002313070.1| predicted protein [Populus trichocarpa] gi|222849478|gb|EEE87025.1| predicted protein [Populus trichocarpa] Length = 591 Score = 79.0 bits (193), Expect = 4e-13 Identities = 50/106 (47%), Positives = 59/106 (55%), Gaps = 3/106 (2%) Frame = +1 Query: 61 SFDGIENDDDG---WTKPSKNPTCQVITRESLIAAQREXXXXXXXXXXXXXXXXXXXXXX 231 S DG+ ++DD W P K T +VIT+ESL+AAQRE Sbjct: 23 SHDGLADNDDSALQWAPP-KGSTTKVITKESLLAAQRE---------------------- 59 Query: 232 XXAAQREDLRRVMELLGLSEQHARTLLIHHRWDYQKLLADLVEKEK 369 DLRRVM+LL L E HARTLLIH+RWD +KLLA LVEK K Sbjct: 60 -------DLRRVMDLLSLKEHHARTLLIHYRWDVEKLLAVLVEKGK 98 >ref|XP_002284665.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1 isoform 1 [Vitis vinifera] gi|297741410|emb|CBI32541.3| unnamed protein product [Vitis vinifera] Length = 589 Score = 79.0 bits (193), Expect = 4e-13 Identities = 47/104 (45%), Positives = 58/104 (55%), Gaps = 1/104 (0%) Frame = +1 Query: 61 SFDGIENDDDGWT-KPSKNPTCQVITRESLIAAQREXXXXXXXXXXXXXXXXXXXXXXXX 237 SFDG+ N++ + P K P+ QVIT+ESL+ AQR+ Sbjct: 18 SFDGLVNEESDFQWVPPKAPSSQVITKESLLTAQRD------------------------ 53 Query: 238 AAQREDLRRVMELLGLSEQHARTLLIHHRWDYQKLLADLVEKEK 369 DLRRVM+LL L E HARTLLIHHRWD +KL A +VEK K Sbjct: 54 -----DLRRVMDLLSLREHHARTLLIHHRWDVEKLFAVMVEKGK 92 >ref|XP_004145339.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1-like [Cucumis sativus] gi|449471519|ref|XP_004153333.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1-like [Cucumis sativus] gi|449502370|ref|XP_004161621.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1-like [Cucumis sativus] Length = 589 Score = 77.0 bits (188), Expect = 1e-12 Identities = 45/103 (43%), Positives = 57/103 (55%) Frame = +1 Query: 61 SFDGIENDDDGWTKPSKNPTCQVITRESLIAAQREXXXXXXXXXXXXXXXXXXXXXXXXA 240 S G+EN+D + K P+ +VIT+ESL+AAQ+E Sbjct: 18 SLHGLENEDSEIQRVPKTPSTKVITKESLLAAQKE------------------------- 52 Query: 241 AQREDLRRVMELLGLSEQHARTLLIHHRWDYQKLLADLVEKEK 369 D+RRVM+LL L E HARTLLIH+RWD +KL A LVEK K Sbjct: 53 ----DMRRVMDLLSLREYHARTLLIHYRWDVEKLFAVLVEKGK 91