BLASTX nr result

ID: Coptis21_contig00012832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012832
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519105.1| Protein ariadne-1, putative [Ricinus communi...    80   1e-13
ref|XP_003631625.1| PREDICTED: probable E3 ubiquitin-protein lig...    79   4e-13
ref|XP_002313070.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002284665.1| PREDICTED: probable E3 ubiquitin-protein lig...    79   4e-13
ref|XP_004145339.1| PREDICTED: probable E3 ubiquitin-protein lig...    77   1e-12

>ref|XP_002519105.1| Protein ariadne-1, putative [Ricinus communis]
           gi|223541768|gb|EEF43316.1| Protein ariadne-1, putative
           [Ricinus communis]
          Length = 592

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 49/104 (47%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
 Frame = +1

Query: 61  SFDGIENDD-DGWTKPSKNPTCQVITRESLIAAQREXXXXXXXXXXXXXXXXXXXXXXXX 237
           S DGIEN++ D    P K PT ++IT+ESL+AAQRE                        
Sbjct: 20  SLDGIENEESDFHWAPPKGPTTKIITKESLLAAQRE------------------------ 55

Query: 238 AAQREDLRRVMELLGLSEQHARTLLIHHRWDYQKLLADLVEKEK 369
                DLRRVMELL L E HARTLLIH+RWD ++L A  VEK K
Sbjct: 56  -----DLRRVMELLSLREHHARTLLIHYRWDVERLFAVFVEKGK 94


>ref|XP_003631625.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1 isoform 2
           [Vitis vinifera]
          Length = 573

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 47/104 (45%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
 Frame = +1

Query: 61  SFDGIENDDDGWT-KPSKNPTCQVITRESLIAAQREXXXXXXXXXXXXXXXXXXXXXXXX 237
           SFDG+ N++  +   P K P+ QVIT+ESL+ AQR+                        
Sbjct: 18  SFDGLVNEESDFQWVPPKAPSSQVITKESLLTAQRD------------------------ 53

Query: 238 AAQREDLRRVMELLGLSEQHARTLLIHHRWDYQKLLADLVEKEK 369
                DLRRVM+LL L E HARTLLIHHRWD +KL A +VEK K
Sbjct: 54  -----DLRRVMDLLSLREHHARTLLIHHRWDVEKLFAVMVEKGK 92


>ref|XP_002313070.1| predicted protein [Populus trichocarpa] gi|222849478|gb|EEE87025.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 50/106 (47%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
 Frame = +1

Query: 61  SFDGIENDDDG---WTKPSKNPTCQVITRESLIAAQREXXXXXXXXXXXXXXXXXXXXXX 231
           S DG+ ++DD    W  P K  T +VIT+ESL+AAQRE                      
Sbjct: 23  SHDGLADNDDSALQWAPP-KGSTTKVITKESLLAAQRE---------------------- 59

Query: 232 XXAAQREDLRRVMELLGLSEQHARTLLIHHRWDYQKLLADLVEKEK 369
                  DLRRVM+LL L E HARTLLIH+RWD +KLLA LVEK K
Sbjct: 60  -------DLRRVMDLLSLKEHHARTLLIHYRWDVEKLLAVLVEKGK 98


>ref|XP_002284665.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1 isoform 1
           [Vitis vinifera] gi|297741410|emb|CBI32541.3| unnamed
           protein product [Vitis vinifera]
          Length = 589

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 47/104 (45%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
 Frame = +1

Query: 61  SFDGIENDDDGWT-KPSKNPTCQVITRESLIAAQREXXXXXXXXXXXXXXXXXXXXXXXX 237
           SFDG+ N++  +   P K P+ QVIT+ESL+ AQR+                        
Sbjct: 18  SFDGLVNEESDFQWVPPKAPSSQVITKESLLTAQRD------------------------ 53

Query: 238 AAQREDLRRVMELLGLSEQHARTLLIHHRWDYQKLLADLVEKEK 369
                DLRRVM+LL L E HARTLLIHHRWD +KL A +VEK K
Sbjct: 54  -----DLRRVMDLLSLREHHARTLLIHHRWDVEKLFAVMVEKGK 92


>ref|XP_004145339.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
           sativus] gi|449471519|ref|XP_004153333.1| PREDICTED:
           probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
           sativus] gi|449502370|ref|XP_004161621.1| PREDICTED:
           probable E3 ubiquitin-protein ligase ARI1-like [Cucumis
           sativus]
          Length = 589

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/103 (43%), Positives = 57/103 (55%)
 Frame = +1

Query: 61  SFDGIENDDDGWTKPSKNPTCQVITRESLIAAQREXXXXXXXXXXXXXXXXXXXXXXXXA 240
           S  G+EN+D    +  K P+ +VIT+ESL+AAQ+E                         
Sbjct: 18  SLHGLENEDSEIQRVPKTPSTKVITKESLLAAQKE------------------------- 52

Query: 241 AQREDLRRVMELLGLSEQHARTLLIHHRWDYQKLLADLVEKEK 369
               D+RRVM+LL L E HARTLLIH+RWD +KL A LVEK K
Sbjct: 53  ----DMRRVMDLLSLREYHARTLLIHYRWDVEKLFAVLVEKGK 91


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