BLASTX nr result

ID: Coptis21_contig00012831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012831
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510547.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_002274273.1| PREDICTED: uncharacterized protein LOC100248...    75   5e-12
ref|XP_002306937.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_003555864.1| PREDICTED: uncharacterized protein LOC100797...    67   1e-09
gb|ACU17840.1| unknown [Glycine max]                                   65   4e-09

>ref|XP_002510547.1| conserved hypothetical protein [Ricinus communis]
           gi|223551248|gb|EEF52734.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 304

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 6/78 (7%)
 Frame = -2

Query: 218 LPYSTPPTS---LDFQSRGLRSVQMPSPSDIQE---SSGSDSDLVDKKSRNQKKREARQT 57
           L ++TP +S   + F+SRGLR     +PSD +E   +S SDSD  +K+SRNQKKREAR+ 
Sbjct: 46  LVFNTPRSSNRSVHFRSRGLRLPDATTPSDRKEGGSNSNSDSDSDEKRSRNQKKREARRA 105

Query: 56  VKWGMELAEFSVPQIKRI 3
           V+WGMELA FS PQIKRI
Sbjct: 106 VRWGMELASFSGPQIKRI 123


>ref|XP_002274273.1| PREDICTED: uncharacterized protein LOC100248885 [Vitis vinifera]
           gi|302142678|emb|CBI19881.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 5/78 (6%)
 Frame = -2

Query: 221 HLPYSTPPTSLD----FQSRGLRSVQMPSPSDIQESSGS-DSDLVDKKSRNQKKREARQT 57
           HL   T P SL     F+S GLR    P+PS +QE++G  DSD   K+SRN++KREAR+ 
Sbjct: 42  HLLSFTKPPSLHSNRHFRSYGLRLPNDPAPSHLQETAGEQDSDA--KRSRNERKREARRA 99

Query: 56  VKWGMELAEFSVPQIKRI 3
           V+WGMELA FS PQIKRI
Sbjct: 100 VRWGMELAAFSTPQIKRI 117


>ref|XP_002306937.1| predicted protein [Populus trichocarpa] gi|222856386|gb|EEE93933.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
 Frame = -2

Query: 194 SLDFQSRGLRSVQMPSPSDIQESSG-SDSDLVDKKSRNQKKREARQTVKWGMELAEFSVP 18
           S+ F+ RG +    P+P D ++    SDSD    KSRNQKKREAR++V+WGMELA FS P
Sbjct: 51  SVPFRPRGPKLPNSPTPYDFEQGGNVSDSDSEANKSRNQKKREARRSVRWGMELASFSPP 110

Query: 17  QIKRI 3
           QIKRI
Sbjct: 111 QIKRI 115


>ref|XP_003555864.1| PREDICTED: uncharacterized protein LOC100797810 [Glycine max]
          Length = 287

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
 Frame = -2

Query: 221 HLPYSTPPTSLDFQSRGLRSVQMPS----PSDIQESSGSDSDLVDKKSRNQKKREARQTV 54
           HL    P TS  F    + +   P      S +     +DSDL +KKSRNQ KREAR+TV
Sbjct: 30  HLLTPPPKTSHRFSFATVAASSRPKVRTPKSPVPPPPTADSDLEEKKSRNQLKREARRTV 89

Query: 53  KWGMELAEFSVPQIKRI 3
           KWGM+LA FS PQIKRI
Sbjct: 90  KWGMDLASFSPPQIKRI 106


>gb|ACU17840.1| unknown [Glycine max]
          Length = 234

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/77 (49%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
 Frame = -2

Query: 221 HLPYSTPPTSLDFQSRGLRSVQMPS----PSDIQESSGSDSDLVDKKSRNQKKREARQTV 54
           HL    P TS  F    + +   P      S +     +DSDL +KKSRNQ KREAR+ V
Sbjct: 29  HLLTPPPKTSHRFSFATVAASSRPKVRTPKSPVPPPPTADSDLEEKKSRNQLKREARRAV 88

Query: 53  KWGMELAEFSVPQIKRI 3
           KWGM+LA FS PQIKRI
Sbjct: 89  KWGMDLASFSPPQIKRI 105


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