BLASTX nr result
ID: Coptis21_contig00012823
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00012823
(649 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi... 209 3e-52
emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera] 209 3e-52
ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arab... 200 2e-49
ref|XP_002332913.1| predicted protein [Populus trichocarpa] gi|2... 199 3e-49
ref|XP_002513375.1| pentatricopeptide repeat-containing protein,... 195 7e-48
>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 209 bits (533), Expect = 3e-52
Identities = 108/179 (60%), Positives = 131/179 (73%), Gaps = 6/179 (3%)
Frame = -1
Query: 520 HPNIGISLFNQ-----KGFSEITSFITGKALHAFC-VKNVALSQFHLNTLINFYSRFGCV 359
H + GI N KGFSEITS + GKALHAFC V +V L F NTLIN YS+FG +
Sbjct: 736 HTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNI 795
Query: 358 ESSRYLFDEMPQRSESSWSTMLSGYVRAGLYDEAVELFREMWGQGIEPNGFILASLLTAC 179
E +RY+FDEM R+E+SWSTMLSGYVR GLY+EAV LF +MWG G+EPNGF++ASL+TAC
Sbjct: 796 EHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITAC 855
Query: 178 NRSEGMVLHGSQVHGLVVKFGLLSNVFVSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
+RS M G QVHG VVK G+L +V+V TAL++FYGS G A FEEMP+ N+VS
Sbjct: 856 SRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVS 914
Score = 96.7 bits (239), Expect = 3e-18
Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Frame = -1
Query: 454 GKALHAFCVKNVALSQFHLNT-LINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVR 278
G +H + N S HLNT LI FY + G V ++R +FD MP+RS SW+ M+SGY +
Sbjct: 49 GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 108
Query: 277 AGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVF 98
G +++A LF +M G++ N F S L AC + + G QV G + K + N+F
Sbjct: 109 NGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDM-GIQVQGCIQKGRFVENLF 167
Query: 97 VSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
V +AL++F+ G +A F M E+++VS
Sbjct: 168 VKSALVDFHSKCGKMEDASYLFGTMMERDVVS 199
Score = 90.5 bits (223), Expect = 2e-16
Identities = 48/152 (31%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
Frame = -1
Query: 454 GKALHAFCVKNVALSQFHLNT-LINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVR 278
G +H F VK L ++ T L++FY G V +++ LF+EMP + SW++++ GY
Sbjct: 865 GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSD 924
Query: 277 AGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVF 98
+G E + +++ M +G+ N A++ ++C E VL G QV G ++++G +V
Sbjct: 925 SGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVL-GYQVLGHIIQYGFEDSVS 983
Query: 97 VSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
V+ +L++ + S+ EAC F+ M E +I+S
Sbjct: 984 VANSLISMFSSFSSVEEACYVFDHMNECDIIS 1015
Score = 85.9 bits (211), Expect = 6e-15
Identities = 49/132 (37%), Positives = 73/132 (55%)
Frame = -1
Query: 397 NTLINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVRAGLYDEAVELFREMWGQGIE 218
N+LI+ +S F VE + Y+FD M + SW+ M+S Y GL E++ F M E
Sbjct: 986 NSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNE 1045
Query: 217 PNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVFVSTALLNFYGSYGFTAEACS 38
N L+SLL+ C+ + + G +HGLVVK GL SNV + LL Y G + +A
Sbjct: 1046 TNSTTLSSLLSVCSSVDNL-KWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAEL 1104
Query: 37 FFEEMPEKNIVS 2
F+ M E++++S
Sbjct: 1105 VFQAMTERDLIS 1116
Score = 77.0 bits (188), Expect = 3e-12
Identities = 42/135 (31%), Positives = 73/135 (54%)
Frame = -1
Query: 406 FHLNTLINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVRAGLYDEAVELFREMWGQ 227
F + L++F+S+ G +E + YLF M +R SW+ M+ GY G D++ +FR M
Sbjct: 167 FVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRG 226
Query: 226 GIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVFVSTALLNFYGSYGFTAE 47
G+ P+ + L S+L A G+++ +Q+HG++ + G S V+ L+N Y G
Sbjct: 227 GLVPDCYTLGSVLRASAEGGGLII-ANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRS 285
Query: 46 ACSFFEEMPEKNIVS 2
A + M +K++ S
Sbjct: 286 AKDLRKGMLKKDLFS 300
Score = 76.3 bits (186), Expect = 5e-12
Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Frame = -1
Query: 478 SEITSFITGKALHAFCVK-----NVALSQFHLNTLINFYSRFGCVESSRYLFDEMPQRSE 314
+ + SF G +HAF +K +VA+ N LI+ Y++ G +E ++ FDEM +++
Sbjct: 345 ANLASFALGTQIHAFALKYQPSYDVAMG----NALIDMYAKSGEIEDAKRAFDEMEEKNV 400
Query: 313 SSWSTMLSGYVRAGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQ-VH 137
SW++++SGY + G AV L+++M +G +PN SLL AC+ + G+ G + +
Sbjct: 401 ISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHT-GLTAEGCECFN 459
Query: 136 GLVVKFGLLSNVFVSTALLNFYGSYGFTAEA 44
+V K+ + + +++ + G EA
Sbjct: 460 NMVNKYNIKPRAEHYSCMVDLFARQGLLEEA 490
Score = 72.8 bits (177), Expect = 5e-11
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Frame = -1
Query: 478 SEITSFITGKALHAFCVK-----NVALSQFHLNTLINFYSRFGCVESSRYLFDEMPQRSE 314
S + + G+ +H VK NV + NTL+ YS G E + +F M +R
Sbjct: 1059 SSVDNLKWGRGIHGLVVKLGLDSNVCIC----NTLLTLYSEAGRSEDAELVFQAMTERDL 1114
Query: 313 SSWSTMLSGYVRAGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHG 134
SW++M++ YV+ G + +++ E+ G N AS L AC+ E ++ VH
Sbjct: 1115 ISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPE-CLIESKIVHA 1173
Query: 133 LVVKFGLLSNVFVSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
L++ G + V AL+ YG G EA + MP+ + V+
Sbjct: 1174 LIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVT 1217
Score = 72.8 bits (177), Expect = 5e-11
Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Frame = -1
Query: 454 GKALHAFCVKNVALSQFHL-NTLINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVR 278
G +HA V S ++ N+LI Y++ G + SS Y+FD + +S +W+ M++
Sbjct: 1270 GMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAH 1329
Query: 277 AGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVF 98
G +EA+++F EM G+ + F + L A + ++ G Q+HGLV+K G S++
Sbjct: 1330 HGCGEEALKIFGEMRNVGVNLDQFSFSGGL-AATANLAVLEEGQQLHGLVIKLGFESDLH 1388
Query: 97 VSTALLNFYGSYG 59
V+ A ++ YG G
Sbjct: 1389 VTNAAMDMYGKCG 1401
Score = 71.2 bits (173), Expect = 2e-10
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Frame = -1
Query: 391 LINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVRAGLYD-EAVELFREMWGQGIEP 215
LIN Y++ G + S++ L M ++ S + +++GY G+Y +A++LF+EM I
Sbjct: 273 LINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGM 332
Query: 214 NGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVFVSTALLNFYGSYGFTAEACSF 35
+ IL S+L C L G+Q+H +K+ +V + AL++ Y G +A
Sbjct: 333 DDVILCSMLNICANLASFAL-GTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRA 391
Query: 34 FEEMPEKNIVS 2
F+EM EKN++S
Sbjct: 392 FDEMEEKNVIS 402
Score = 66.2 bits (160), Expect = 5e-09
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Frame = -1
Query: 535 QILSDHPNIGISL--FNQKGFSEITSFIT----GKALHAFCVKNVALSQFHL-NTLINFY 377
+I + N+G++L F+ G T+ + G+ LH +K S H+ N ++ Y
Sbjct: 1338 KIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMY 1397
Query: 376 SRFGCVESSRYLFDEMPQRSESSWSTMLSGYVRAGLYDEAVELFREMWGQGIEPNGFILA 197
+ G + + + RS SW+ ++S + R G + +A E F EM G +P+
Sbjct: 1398 GKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFV 1457
Query: 196 SLLTACNRSEGMVLHG-SQVHGLVVKFGLLSNVFVSTALLNFYGSYGFTAEACSFFEEMP 20
SLL+ACN G+V G + + +FG+ + +++ G G + A F +EMP
Sbjct: 1458 SLLSACNHG-GLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMP 1516
Score = 65.5 bits (158), Expect = 8e-09
Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Frame = -1
Query: 460 ITGKALHAFCVKNVALSQFHL-----NTLINFYSRFGCVESSRYLFDEMPQRSESSWSTM 296
I K +HA + ++ FH N L+ Y + G + ++ + MPQ +W+ +
Sbjct: 1166 IESKIVHALII----VAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNAL 1221
Query: 295 LSGYVRAGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFG 116
+ G+ +EAV+ ++ + +GI N + S+L AC+ + ++ HG +H +V G
Sbjct: 1222 IGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTG 1281
Query: 115 LLSNVFVSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
S+ +V +L+ Y G + F+ + K+ ++
Sbjct: 1282 FESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPIT 1319
>emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 209 bits (533), Expect = 3e-52
Identities = 108/179 (60%), Positives = 131/179 (73%), Gaps = 6/179 (3%)
Frame = -1
Query: 520 HPNIGISLFNQ-----KGFSEITSFITGKALHAFC-VKNVALSQFHLNTLINFYSRFGCV 359
H + GI N KGFSEITS + GKALHAFC V +V L F NTLIN YS+FG +
Sbjct: 86 HTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNI 145
Query: 358 ESSRYLFDEMPQRSESSWSTMLSGYVRAGLYDEAVELFREMWGQGIEPNGFILASLLTAC 179
E +RY+FDEM R+E+SWSTMLSGYVR GLY+EAV LF +MWG G+EPNGF++ASL+TAC
Sbjct: 146 EHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITAC 205
Query: 178 NRSEGMVLHGSQVHGLVVKFGLLSNVFVSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
+RS M G QVHG VVK G+L +V+V TAL++FYGS G A FEEMP+ N+VS
Sbjct: 206 SRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVS 264
Score = 90.5 bits (223), Expect = 2e-16
Identities = 48/152 (31%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
Frame = -1
Query: 454 GKALHAFCVKNVALSQFHLNT-LINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVR 278
G +H F VK L ++ T L++FY G V +++ LF+EMP + SW++++ GY
Sbjct: 215 GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSD 274
Query: 277 AGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVF 98
+G E + +++ M +G+ N A++ ++C E VL G QV G ++++G +V
Sbjct: 275 SGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVL-GYQVLGHIIQYGFEDSVS 333
Query: 97 VSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
V+ +L++ + S+ EAC F+ M E +I+S
Sbjct: 334 VANSLISMFSSFSSVEEACYVFDHMNECDIIS 365
Score = 85.9 bits (211), Expect = 6e-15
Identities = 49/132 (37%), Positives = 73/132 (55%)
Frame = -1
Query: 397 NTLINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVRAGLYDEAVELFREMWGQGIE 218
N+LI+ +S F VE + Y+FD M + SW+ M+S Y GL E++ F M E
Sbjct: 336 NSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNE 395
Query: 217 PNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVFVSTALLNFYGSYGFTAEACS 38
N L+SLL+ C+ + + G +HGLVVK GL SNV + LL Y G + +A
Sbjct: 396 TNSTTLSSLLSVCSSVDNL-KWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAEL 454
Query: 37 FFEEMPEKNIVS 2
F+ M E++++S
Sbjct: 455 VFQAMTERDLIS 466
Score = 72.8 bits (177), Expect = 5e-11
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Frame = -1
Query: 478 SEITSFITGKALHAFCVK-----NVALSQFHLNTLINFYSRFGCVESSRYLFDEMPQRSE 314
S + + G+ +H VK NV + NTL+ YS G E + +F M +R
Sbjct: 409 SSVDNLKWGRGIHGLVVKLGLDSNVCIC----NTLLTLYSEAGRSEDAELVFQAMTERDL 464
Query: 313 SSWSTMLSGYVRAGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHG 134
SW++M++ YV+ G + +++ E+ G N AS L AC+ E ++ VH
Sbjct: 465 ISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPE-CLIESKIVHA 523
Query: 133 LVVKFGLLSNVFVSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
L++ G + V AL+ YG G EA + MP+ + V+
Sbjct: 524 LIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVT 567
Score = 72.8 bits (177), Expect = 5e-11
Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Frame = -1
Query: 454 GKALHAFCVKNVALSQFHL-NTLINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVR 278
G +HA V S ++ N+LI Y++ G + SS Y+FD + +S +W+ M++
Sbjct: 620 GMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAH 679
Query: 277 AGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVF 98
G +EA+++F EM G+ + F + L A + ++ G Q+HGLV+K G S++
Sbjct: 680 HGCGEEALKIFGEMRNVGVNLDQFSFSGGL-AATANLAVLEEGQQLHGLVIKLGFESDLH 738
Query: 97 VSTALLNFYGSYG 59
V+ A ++ YG G
Sbjct: 739 VTNAAMDMYGKCG 751
Score = 66.2 bits (160), Expect = 5e-09
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Frame = -1
Query: 535 QILSDHPNIGISL--FNQKGFSEITSFIT----GKALHAFCVKNVALSQFHL-NTLINFY 377
+I + N+G++L F+ G T+ + G+ LH +K S H+ N ++ Y
Sbjct: 688 KIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMY 747
Query: 376 SRFGCVESSRYLFDEMPQRSESSWSTMLSGYVRAGLYDEAVELFREMWGQGIEPNGFILA 197
+ G + + + RS SW+ ++S + R G + +A E F EM G +P+
Sbjct: 748 GKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFV 807
Query: 196 SLLTACNRSEGMVLHG-SQVHGLVVKFGLLSNVFVSTALLNFYGSYGFTAEACSFFEEMP 20
SLL+ACN G+V G + + +FG+ + +++ G G + A F +EMP
Sbjct: 808 SLLSACNHG-GLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMP 866
Score = 65.5 bits (158), Expect = 8e-09
Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Frame = -1
Query: 460 ITGKALHAFCVKNVALSQFHL-----NTLINFYSRFGCVESSRYLFDEMPQRSESSWSTM 296
I K +HA + ++ FH N L+ Y + G + ++ + MPQ +W+ +
Sbjct: 516 IESKIVHALII----VAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNAL 571
Query: 295 LSGYVRAGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFG 116
+ G+ +EAV+ ++ + +GI N + S+L AC+ + ++ HG +H +V G
Sbjct: 572 IGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTG 631
Query: 115 LLSNVFVSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
S+ +V +L+ Y G + F+ + K+ ++
Sbjct: 632 FESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPIT 669
>ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata] gi|297338751|gb|EFH69168.1| hypothetical protein
ARALYDRAFT_889039 [Arabidopsis lyrata subsp. lyrata]
Length = 1038
Score = 200 bits (508), Expect = 2e-49
Identities = 101/177 (57%), Positives = 130/177 (73%), Gaps = 1/177 (0%)
Frame = -1
Query: 529 LSDHPNIGISLFNQKGFSEITSFITGKALHAFCVKN-VALSQFHLNTLINFYSRFGCVES 353
LSDH N +S F+Q GFS+IT TG+ALHA CVK V LS H NTLIN Y++FG V+
Sbjct: 52 LSDHWNPELSCFDQTGFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKP 111
Query: 352 SRYLFDEMPQRSESSWSTMLSGYVRAGLYDEAVELFREMWGQGIEPNGFILASLLTACNR 173
+RYLFD+MP R+E SW+TM+SG VR GLY E +E F++M GI+P+ F++ASL+TAC R
Sbjct: 112 ARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGR 171
Query: 172 SEGMVLHGSQVHGLVVKFGLLSNVFVSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
S M G QVHG V K GLLS+V+VSTA+L+ YG YG + + FEEMP++N+VS
Sbjct: 172 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVS 228
Score = 89.4 bits (220), Expect = 5e-16
Identities = 47/155 (30%), Positives = 91/155 (58%), Gaps = 1/155 (0%)
Frame = -1
Query: 463 FITGKALHAFCVKNVALSQFHLNT-LINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSG 287
F G +H F K+ LS +++T +++ Y +G V SR +F+EMP R+ SW++++ G
Sbjct: 176 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 235
Query: 286 YVRAGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLS 107
Y G +E +++++ M G+G+E N ++ ++++C + L G Q+ G V+K GL S
Sbjct: 236 YSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESL-GRQIIGQVIKSGLES 294
Query: 106 NVFVSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
+ V +L++ +G+ G A F ++ E++ +S
Sbjct: 295 KLAVENSLISMFGNMGNVDYANYIFNQISERDTIS 329
Score = 73.2 bits (178), Expect = 4e-11
Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Frame = -1
Query: 397 NTLINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVRAGLYDEAVELFREMWGQGIE 218
N+LI+ + G V+ + Y+F+++ +R SW+++++ Y + G +E+ +F M E
Sbjct: 300 NSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDE 359
Query: 217 PNGFILASLLTACNRSEGMVLH---GSQVHGLVVKFGLLSNVFVSTALLNFYGSYGFTAE 47
N +++LL+ G V H G +HGLVVK G S V V LL Y G + E
Sbjct: 360 VNSTTVSTLLSVL----GDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEE 415
Query: 46 ACSFFEEMPEKNIVS 2
A F++MP K+++S
Sbjct: 416 ADLVFKQMPTKDLIS 430
Score = 73.2 bits (178), Expect = 4e-11
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Frame = -1
Query: 544 HGTQIL---SDHPNIGISLFNQKGFSEITSFIT-------GKALHAFCVK-NVALSQFHL 398
HG ++L S + G+SL +Q FSE S G+ LH VK L F
Sbjct: 646 HGEEVLKLVSKMRSFGLSL-DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIF 704
Query: 397 NTLINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVRAGLYDEAVELFREMWGQGIE 218
N + YS+ G + + RS SW+ ++S R G ++E E F EM GI+
Sbjct: 705 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIK 764
Query: 217 PNGFILASLLTACNRSEGMVLHGSQVHGLVVK-FGLLSNVFVSTALLNFYGSYGFTAEAC 41
P SLLTAC+ G+V G + ++ K FGL + +++ G G AEA
Sbjct: 765 PGHVTFVSLLTACSHG-GLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAE 823
Query: 40 SFFEEMPEK 14
+F +MP K
Sbjct: 824 TFISKMPMK 832
Score = 68.9 bits (167), Expect = 8e-10
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Frame = -1
Query: 463 FITGKALHAFCVKNVAL-SQFHLNTLINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSG 287
F G+ LH V + +Q N L++ Y + G + +SR + +MP+R +W+ ++ G
Sbjct: 479 FDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGG 538
Query: 286 YVRAGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLS 107
Y D+A+ F+ + +G+ N + S+L+AC ++ G +H +V G S
Sbjct: 539 YAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFES 598
Query: 106 NVFVSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
+ V +L+ Y G + + F + ++I++
Sbjct: 599 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIIT 633
Score = 65.9 bits (159), Expect = 6e-09
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Frame = -1
Query: 454 GKALHAFCVKNVALSQFHL-NTLINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVR 278
G+ +H VK S + NTL+ Y+ G E + +F +MP + SW+++++ +V
Sbjct: 381 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVN 440
Query: 277 AGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVF 98
G +A+ + M G N S L AC E G +HGLVV GL N
Sbjct: 441 DGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPE-FFDKGRILHGLVVVSGLFDNQI 499
Query: 97 VSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
+ AL++ YG G + + +MP +++V+
Sbjct: 500 IGNALVSMYGKIGGMSTSRRVLLQMPRRDVVA 531
>ref|XP_002332913.1| predicted protein [Populus trichocarpa] gi|222873730|gb|EEF10861.1|
predicted protein [Populus trichocarpa]
Length = 253
Score = 199 bits (507), Expect = 3e-49
Identities = 100/183 (54%), Positives = 136/183 (74%), Gaps = 2/183 (1%)
Frame = -1
Query: 544 HGTQI-LSDHPNIGISLFNQKGFSEITSFITGKALHAFCVKN-VALSQFHLNTLINFYSR 371
+GT + L +HPN IS F QKGFS+IT +TGKALHA +K V L+ F+ NTLIN YS+
Sbjct: 7 YGTCVSLLNHPNPEISCFYQKGFSQITKEVTGKALHALFIKGLVNLTVFYSNTLINMYSK 66
Query: 370 FGCVESSRYLFDEMPQRSESSWSTMLSGYVRAGLYDEAVELFREMWGQGIEPNGFILASL 191
FG + SRYLFD+M +R+++SW+ M+SG+VRAG Y E++ F EM G++P+G +ASL
Sbjct: 67 FGHIGFSRYLFDKMSERNDASWNNMMSGFVRAGFYRESMRFFNEMRDFGVKPSGIAVASL 126
Query: 190 LTACNRSEGMVLHGSQVHGLVVKFGLLSNVFVSTALLNFYGSYGFTAEACSFFEEMPEKN 11
+TAC RSE M++ G QVHG +VK GLLS+VFV T+L++ YG+YG A+A F+EM KN
Sbjct: 127 VTACERSEWMLIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKN 186
Query: 10 IVS 2
+VS
Sbjct: 187 VVS 189
>ref|XP_002513375.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547283|gb|EEF48778.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 922
Score = 195 bits (495), Expect = 7e-48
Identities = 99/184 (53%), Positives = 131/184 (71%), Gaps = 1/184 (0%)
Frame = -1
Query: 550 IKHGTQILSDHPNIGISLFNQKGFSEITSFITGKALHAFCVKNVA-LSQFHLNTLINFYS 374
I T LS+HPN IS F QKGFS+IT GKALHA C+K +A L F+ NTLIN YS
Sbjct: 200 IDASTVTLSNHPNPEISCFYQKGFSQITKEAPGKALHALCIKGLANLGVFYNNTLINMYS 259
Query: 373 RFGCVESSRYLFDEMPQRSESSWSTMLSGYVRAGLYDEAVELFREMWGQGIEPNGFILAS 194
+FG + +RY+FDEM +++E+SW+ ++S Y+ AGLY E++ LF +M GI+P GF AS
Sbjct: 260 KFGYICLARYVFDEMSEKNEASWNHIISAYLHAGLYRESIGLFNDMRDLGIKPTGFAFAS 319
Query: 193 LLTACNRSEGMVLHGSQVHGLVVKFGLLSNVFVSTALLNFYGSYGFTAEACSFFEEMPEK 14
L+TAC+RS M+ G QVH L+VKFG+L +VFV T+LL+FYG+YG A F EM +K
Sbjct: 320 LVTACDRSGCMLSEGIQVHDLIVKFGMLCDVFVGTSLLHFYGTYGLAFNARRVFNEMLDK 379
Query: 13 NIVS 2
N+VS
Sbjct: 380 NVVS 383
Score = 82.0 bits (201), Expect = 9e-14
Identities = 50/152 (32%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Frame = -1
Query: 454 GKALHAFCVKNVALSQFHLNT-LINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVR 278
G +H VK L + T L++FY +G ++R +F+EM ++ SW+ ++ Y
Sbjct: 334 GIQVHDLIVKFGMLCDVFVGTSLLHFYGTYGLAFNARRVFNEMLDKNVVSWTALMVAYSD 393
Query: 277 AGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVF 98
G E + ++ EM +G+ N LA+++++C E L G Q+ G V+K GL +NV
Sbjct: 394 FGDPMEVMNIYCEMRCEGLSGNANTLATVISSCASLEDEFL-GHQILGHVIKSGLGTNVS 452
Query: 97 VSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
V +L++ +GS+G EAC F M E +I+S
Sbjct: 453 VENSLISMFGSFGRAQEACYIFGGMNEHDIIS 484
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/132 (31%), Positives = 74/132 (56%)
Frame = -1
Query: 397 NTLINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVRAGLYDEAVELFREMWGQGIE 218
N+LI+ + FG + + Y+F M + SW++M+S YV+ GL++E++ F M
Sbjct: 455 NSLISMFGSFGRAQEACYIFGGMNEHDIISWNSMISVYVQNGLFEESLRCFYWMQHVHNH 514
Query: 217 PNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVFVSTALLNFYGSYGFTAEACS 38
N L++LL+ C + + G +H LV+KFG+ SN+ + L+ Y G + A
Sbjct: 515 INSTTLSTLLSECGSVDNL-KWGRGIHSLVIKFGMDSNICICNTLIAMYSGAGKSEHADL 573
Query: 37 FFEEMPEKNIVS 2
F++M E++++S
Sbjct: 574 VFQKMAERDLIS 585
Score = 70.1 bits (170), Expect = 3e-10
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Frame = -1
Query: 454 GKALHAFCVKNVALSQFHL-NTLINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVR 278
G+ +H+ +K S + NTLI YS G E + +F +M +R SW++ML+ Y +
Sbjct: 536 GRGIHSLVIKFGMDSNICICNTLIAMYSGAGKSEHADLVFQKMAERDLISWNSMLACYAQ 595
Query: 277 AGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVF 98
G +A+++F ++ N S L AC+ + + G +H LV+ GL ++
Sbjct: 596 DGKSLDALKIFTRIFHMKKGANFVTFTSALAACSDPD-FIAEGRILHALVILTGLHESLI 654
Query: 97 VSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
VS AL+ Y G T EA F+ M ++ V+
Sbjct: 655 VSNALVTLYAKSGTTIEAKKVFQMMSRRDEVT 686
Score = 65.1 bits (157), Expect = 1e-08
Identities = 38/133 (28%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Frame = -1
Query: 454 GKALHAFCVK-NVALSQFHLNTLINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVR 278
G +HA+ V + Q+ N+LI Y++ G + SS +FD + ++ +W+T+++
Sbjct: 738 GMPIHAYTVMIGLESDQYVQNSLITMYAKCGDLNSSNCIFDGLINKNAVAWNTVMAANAY 797
Query: 277 AGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVF 98
G +E+++L +M G++ + F + L+A + M+ G Q+ L VK G S+ F
Sbjct: 798 HGQMEESLKLLVKMRHAGVDLDQFSFSGCLSA-TATLAMLEEGQQLQSLAVKLGFDSDPF 856
Query: 97 VSTALLNFYGSYG 59
V+ AL++ Y G
Sbjct: 857 VTNALMDMYAKCG 869
Score = 64.7 bits (156), Expect = 1e-08
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Frame = -1
Query: 454 GKALHAFCV-KNVALSQFHLNTLINFYSRFGCVESSRYLFDEMPQRSESSWSTMLSGYVR 278
G+ LHA + + S N L+ Y++ G ++ +F M +R E +W+ ++ G+
Sbjct: 637 GRILHALVILTGLHESLIVSNALVTLYAKSGTTIEAKKVFQMMSRRDEVTWNALIGGHAN 696
Query: 277 AGLYDEAVELFREMWGQGIEPNGFILASLLTACNRSEGMVLHGSQVHGLVVKFGLLSNVF 98
DEAV+ F+ M + I + +A++L A ++ HG +H V GL S+ +
Sbjct: 697 NRESDEAVKAFKLM-REDIPASYITIANVLGALLAPTDLLKHGMPIHAYTVMIGLESDQY 755
Query: 97 VSTALLNFYGSYGFTAEACSFFEEMPEKNIVS 2
V +L+ Y G + F+ + KN V+
Sbjct: 756 VQNSLITMYAKCGDLNSSNCIFDGLINKNAVA 787