BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012819
         (1478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633330.1| PREDICTED: mitochondrial import inner membra...   375   e-101
ref|XP_002264515.1| PREDICTED: mitochondrial import inner membra...   368   2e-99
gb|ACG39671.1| import inner membrane translocase subunit TIM50 [...   360   5e-97
ref|NP_001142162.1| uncharacterized protein LOC100274327 [Zea ma...   357   6e-96
ref|XP_002458533.1| hypothetical protein SORBIDRAFT_03g035300 [S...   353   6e-95

>ref|XP_003633330.1| PREDICTED: mitochondrial import inner membrane translocase subunit
            TIM50-like [Vitis vinifera] gi|296085020|emb|CBI28435.3|
            unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  375 bits (962), Expect = e-101
 Identities = 185/297 (62%), Positives = 234/297 (78%), Gaps = 4/297 (1%)
 Frame = +3

Query: 339  YLKYGAYATLAGLSGTVAYHTYAYSADEVDSITKDIRNYVKQKKNKDASSLEKFQALLYS 518
            +LK+  + TLAG +    Y +YAY+ DEVD  TK  R   K     +ASSL+KFQALLYS
Sbjct: 71   FLKFAIFGTLAGATAAAGYASYAYTLDEVDEKTKAFRTSAKYTVGDNASSLDKFQALLYS 130

Query: 519  AAMTVPAKCIDIYLELRRSIEDKVREYTEPYSDKLLPDLAPELKGLGVMTLVVDLNETLI 698
            AAMTVPAK I++YL+LRR IE+++R + EP S+KLLPDL P  +   + TLV+DLNETL+
Sbjct: 131  AAMTVPAKAIELYLDLRRPIEEQIRGFAEPSSEKLLPDLHPLEQH--IFTLVLDLNETLL 188

Query: 699  YSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQESMFVDPICERLNQKGTITYRL 878
            YSDWKRERGWRTFKRPGVDAFLE LAQFYEIVV+SDQQ SM+VDP+ ERL+QKG I YRL
Sbjct: 189  YSDWKRERGWRTFKRPGVDAFLEHLAQFYEIVVYSDQQ-SMYVDPVLERLDQKGCIRYRL 247

Query: 879  GRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQPDNCLEIKPWKLEEGDTALLD 1058
             RTAT+YQ+GKHY+DLSKLNRDP+K++YVSGHA+E+ LQP+NC+ IKPWK+E  DT LLD
Sbjct: 248  SRTATRYQDGKHYRDLSKLNRDPSKILYVSGHAIESCLQPENCVPIKPWKVEADDTVLLD 307

Query: 1059 LVPFLEFLAYRRPQDIRKVLESYRGCDVATEF----HERQRKLVDEQRKTKKTIWSR 1217
            L+PFLE++A  RP DIR VL SY+G D+ATEF     + QR+++++++  +   W R
Sbjct: 308  LIPFLEYVARHRPADIRPVLASYQGRDIATEFIARSKDHQRRMLEQRQHGR--FWQR 362


>ref|XP_002264515.1| PREDICTED: mitochondrial import inner membrane translocase subunit
            TIM50 [Vitis vinifera] gi|296089900|emb|CBI39719.3|
            unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  368 bits (945), Expect = 2e-99
 Identities = 186/300 (62%), Positives = 231/300 (77%), Gaps = 4/300 (1%)
 Frame = +3

Query: 330  SWNYLKYGAYATLAGLSGTVAYHTYAYSADEVDSITKDIRNYVKQKKNKDASSLEKFQAL 509
            SWN+LK+G    L     T  Y +YAY+ DEVD  TK  R   K     DAS+ +KF+AL
Sbjct: 77   SWNFLKFGLIGALTVGVATAGYASYAYTLDEVDEKTKAFRASAKDSVEDDASAFDKFKAL 136

Query: 510  LYSAAMTVPAKCIDIYLELRRSIEDKVREYTEPYSDKLLPDLAPELKGLGVMTLVVDLNE 689
             Y++A+TVPAK ID+YL++RR IE++V  +TEP SDKLLPDL P  +   V+TLV+DLNE
Sbjct: 137  AYTSAVTVPAKAIDLYLDMRRLIEEQVHGFTEPLSDKLLPDLHPMEQH--VLTLVLDLNE 194

Query: 690  TLIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQESMFVDPICERLNQKGTIT 869
            TLIYSDWKR+RGWRTFKRPGVDAFLE LAQFYEIVV+SDQ  SM+VDP+ ERL++K  I 
Sbjct: 195  TLIYSDWKRDRGWRTFKRPGVDAFLEHLAQFYEIVVYSDQL-SMYVDPVVERLDKKQCIR 253

Query: 870  YRLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQPDNCLEIKPWKLEEGDTA 1049
            +RL R AT+YQ+GKHY+DLSKLNRDPAK++YVSGHALET+LQP+NC++IKPWKLEE DT 
Sbjct: 254  HRLSRAATRYQDGKHYRDLSKLNRDPAKILYVSGHALETSLQPENCVQIKPWKLEEDDTQ 313

Query: 1050 LLDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEFHER----QRKLVDEQRKTKKTIWSR 1217
            LLDL+PFLE++A  RP DIR VL SY+G D+A EF ER    QR++  +++K     W R
Sbjct: 314  LLDLIPFLEYVARNRPADIRPVLASYQGHDIAKEFIERSKEYQRRM--QEQKQHGRFWRR 371


>gb|ACG39671.1| import inner membrane translocase subunit TIM50 [Zea mays]
          Length = 352

 Score =  360 bits (924), Expect = 5e-97
 Identities = 177/300 (59%), Positives = 231/300 (77%), Gaps = 3/300 (1%)
 Frame = +3

Query: 327  NSWNYLKYGAYATLAGLSGTVAYHTYAYSADEVDSITKDIRNYVKQKKNKDASSLEKFQA 506
            N W  LK+ A+A ++   G   Y +YAYS +EVD +T+++R   KQ   +DAS  E+FQA
Sbjct: 57   NPWGALKFAAFAAVSAAVGGTGYVSYAYSLEEVDQMTRELRKKSKQPIPEDASGFERFQA 116

Query: 507  LLYSAAMTVPAKCIDIYLELRRSIEDKVREYTEPYSDKLLPDLAPELKGLGVMTLVVDLN 686
            + YSAAM VP   I++YL++R  IED++R ++EP SDKLLPDLAP+ +   V+TLV+DLN
Sbjct: 117  MAYSAAMKVPVAAIEVYLDVRSQIEDQIRGFSEPVSDKLLPDLAPQEQH--VLTLVLDLN 174

Query: 687  ETLIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQESMFVDPICERLNQKGTI 866
            ETL+YSDWKRERGWRTFKRPGVDAFLE L +FYEIVV+SDQ  SM+VDP+ +RL+ KG I
Sbjct: 175  ETLVYSDWKRERGWRTFKRPGVDAFLEHLGRFYEIVVYSDQL-SMYVDPVVDRLDPKGNI 233

Query: 867  TYRLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQPDNCLEIKPWKLEEGDT 1046
             +RL R ATKY+NGKHY+DLSKLNR+PA+V+Y+S HA E++LQP+N +EIKPWKLE  DT
Sbjct: 234  RHRLSRVATKYENGKHYRDLSKLNRNPAQVLYISAHAKESSLQPENSVEIKPWKLENDDT 293

Query: 1047 ALLDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEFHERQR---KLVDEQRKTKKTIWSR 1217
             LLDL+PFLE++A  RP DIR VL SY+  D+A EF ER +   + + EQ+K+ + IW R
Sbjct: 294  QLLDLIPFLEYVAMARPSDIRAVLASYQSGDIAAEFIERSKEHQRRMQEQKKSGR-IWRR 352


>ref|NP_001142162.1| uncharacterized protein LOC100274327 [Zea mays]
            gi|194707412|gb|ACF87790.1| unknown [Zea mays]
            gi|413952358|gb|AFW85007.1| import inner membrane
            translocase subunit TIM50 [Zea mays]
          Length = 359

 Score =  357 bits (915), Expect = 6e-96
 Identities = 175/298 (58%), Positives = 230/298 (77%), Gaps = 3/298 (1%)
 Frame = +3

Query: 333  WNYLKYGAYATLAGLSGTVAYHTYAYSADEVDSITKDIRNYVKQKKNKDASSLEKFQALL 512
            W  LK+ A+A ++   G   Y +YAYS +EVD +T+++R   KQ   +DAS  E+FQA+ 
Sbjct: 66   WGALKFAAFAAVSTAVGGTGYVSYAYSLEEVDQMTRELRKKSKQPIPEDASGFERFQAMA 125

Query: 513  YSAAMTVPAKCIDIYLELRRSIEDKVREYTEPYSDKLLPDLAPELKGLGVMTLVVDLNET 692
            YSAAM VP   I++Y+++R  IED++R ++EP SDKLLPDLAP+ +   V+TLV+DLNET
Sbjct: 126  YSAAMKVPVAAIEVYMDVRSQIEDQIRGFSEPVSDKLLPDLAPQEQH--VLTLVLDLNET 183

Query: 693  LIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQESMFVDPICERLNQKGTITY 872
            L+YSDWKRERGWRTFKRPGVDAFLE L +FYEIVV+SDQ  SM+VDP+ +RL+ KG I +
Sbjct: 184  LVYSDWKRERGWRTFKRPGVDAFLEHLGRFYEIVVYSDQL-SMYVDPVVDRLDPKGNIRH 242

Query: 873  RLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQPDNCLEIKPWKLEEGDTAL 1052
            RL R ATKY+NGKHY+DLSKLNR+PA+V+Y+S HA E++LQP+N +EIKPWKLE  DT L
Sbjct: 243  RLSRVATKYENGKHYRDLSKLNRNPAQVLYISAHAKESSLQPENSVEIKPWKLENDDTQL 302

Query: 1053 LDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEFHERQR---KLVDEQRKTKKTIWSR 1217
            LDL+PFLE++A  RP DIR VL SY+  D+A EF ER +   + + EQ+K+ + IW R
Sbjct: 303  LDLIPFLEYVAMARPSDIRAVLASYQSGDIAAEFIERSKEHQRRMQEQKKSGR-IWRR 359


>ref|XP_002458533.1| hypothetical protein SORBIDRAFT_03g035300 [Sorghum bicolor]
            gi|241930508|gb|EES03653.1| hypothetical protein
            SORBIDRAFT_03g035300 [Sorghum bicolor]
          Length = 360

 Score =  353 bits (906), Expect = 6e-95
 Identities = 175/298 (58%), Positives = 227/298 (76%), Gaps = 3/298 (1%)
 Frame = +3

Query: 333  WNYLKYGAYATLAGLSGTVAYHTYAYSADEVDSITKDIRNYVKQKKNKDASSLEKFQALL 512
            W  LK+ A   ++   G  AY +YAYS DEVD +T+++R   KQ   +DAS  E+FQA+ 
Sbjct: 67   WGALKFAALTAVSAAVGGTAYVSYAYSLDEVDQMTRELRKKSKQPIPEDASGFERFQAMA 126

Query: 513  YSAAMTVPAKCIDIYLELRRSIEDKVREYTEPYSDKLLPDLAPELKGLGVMTLVVDLNET 692
            YS+AM VP   I+ YL++R  IED++R ++EP SDKLLPDL P+ +   V+TLV+DLNET
Sbjct: 127  YSSAMKVPVAAIEAYLDVRSQIEDQIRGFSEPVSDKLLPDLLPQEQH--VLTLVLDLNET 184

Query: 693  LIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQESMFVDPICERLNQKGTITY 872
            L+YSDWKRERGWRTFKRPGVDAFLE L +FYEIVV+SDQ  SM+VDP+ +RL+ KG I +
Sbjct: 185  LVYSDWKRERGWRTFKRPGVDAFLEHLGKFYEIVVYSDQL-SMYVDPVVDRLDPKGNIRH 243

Query: 873  RLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQPDNCLEIKPWKLEEGDTAL 1052
            RL R ATKY+NGKHY+DLSKLNR+PA+V+Y+S HA E++LQP+N +EIKPWKLE  DT L
Sbjct: 244  RLSRVATKYENGKHYRDLSKLNRNPAQVLYISAHAKESSLQPENSVEIKPWKLESDDTQL 303

Query: 1053 LDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEFHERQR---KLVDEQRKTKKTIWSR 1217
            LDL+PFLE++A  RP DIR VL SY+  D+A EF ER +   + + EQ+K+ + IW R
Sbjct: 304  LDLIPFLEYVAMVRPSDIRSVLASYQSGDIAAEFIERSKEHQRRMQEQKKSGR-IWRR 360