BLASTX nr result

ID: Coptis21_contig00012812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012812
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272288.2| PREDICTED: uncharacterized protein LOC100251...    85   7e-15
ref|XP_002298838.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002531051.1| conserved hypothetical protein [Ricinus comm...    78   8e-13
gb|AFK42676.1| unknown [Medicago truncatula]                           77   1e-12
ref|XP_003593873.1| hypothetical protein MTR_2g018740 [Medicago ...    77   1e-12

>ref|XP_002272288.2| PREDICTED: uncharacterized protein LOC100251522 [Vitis vinifera]
           gi|297740769|emb|CBI30951.3| unnamed protein product
           [Vitis vinifera]
          Length = 512

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/52 (75%), Positives = 48/52 (92%), Gaps = 2/52 (3%)
 Frame = -3

Query: 164 EKLSRNWSVLKNTPELQKSKGKPKKEGPMSLDDAIDDSEN--DFLLDFNEDE 15
           EK++RNWSVLK+TP+L+KSK KPKKEGPMS+++A+DDSEN  DFLLDF EDE
Sbjct: 461 EKITRNWSVLKSTPQLRKSKDKPKKEGPMSVEEAVDDSENLTDFLLDFEEDE 512


>ref|XP_002298838.1| predicted protein [Populus trichocarpa] gi|222846096|gb|EEE83643.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/52 (69%), Positives = 45/52 (86%), Gaps = 2/52 (3%)
 Frame = -3

Query: 164 EKLSRNWSVLKNTPELQKSKGKPKKEGPMSLDDAIDDSEN--DFLLDFNEDE 15
           EK++RNWSV K TP+ +KSK KPKKEGP+SL++AIDDSEN  DFL+DF +DE
Sbjct: 442 EKITRNWSVYKTTPQARKSKDKPKKEGPLSLEEAIDDSENLTDFLMDFEQDE 493


>ref|XP_002531051.1| conserved hypothetical protein [Ricinus communis]
           gi|223529346|gb|EEF31312.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 524

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 36/52 (69%), Positives = 47/52 (90%), Gaps = 2/52 (3%)
 Frame = -3

Query: 164 EKLSRNWSVLKNTPELQKSKGKPKKEGPMSLDDAIDDSEN--DFLLDFNEDE 15
           EK++RNWSVLK+TP+L+KSK KPKK+G MSL++AI+DSEN  DFL+DF E+E
Sbjct: 472 EKVTRNWSVLKSTPQLRKSKAKPKKDGGMSLEEAIEDSENLTDFLMDFGEEE 523


>gb|AFK42676.1| unknown [Medicago truncatula]
          Length = 101

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/50 (72%), Positives = 43/50 (86%), Gaps = 2/50 (4%)
 Frame = -3

Query: 161 KLSRNWSVLKNTPELQKSKGKPKKEGPMSLDDAIDDSEN--DFLLDFNED 18
           K+ RNWSVLK TP+L+KSK KPKKEGPM+LD+A+ DSEN  DFLLDF E+
Sbjct: 52  KIDRNWSVLKTTPQLRKSKPKPKKEGPMTLDEAVGDSENLTDFLLDFEEE 101


>ref|XP_003593873.1| hypothetical protein MTR_2g018740 [Medicago truncatula]
           gi|355482921|gb|AES64124.1| hypothetical protein
           MTR_2g018740 [Medicago truncatula]
          Length = 540

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/50 (72%), Positives = 43/50 (86%), Gaps = 2/50 (4%)
 Frame = -3

Query: 161 KLSRNWSVLKNTPELQKSKGKPKKEGPMSLDDAIDDSEN--DFLLDFNED 18
           K+ RNWSVLK TP+L+KSK KPKKEGPM+LD+A+ DSEN  DFLLDF E+
Sbjct: 491 KIDRNWSVLKTTPQLRKSKPKPKKEGPMTLDEAVGDSENLTDFLLDFEEE 540


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