BLASTX nr result
ID: Coptis21_contig00012811
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00012811 (735 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278332.1| PREDICTED: RING-box protein 1a [Vitis vinife... 220 3e-55 ref|NP_001235984.1| uncharacterized protein LOC100526919 [Glycin... 218 1e-54 gb|ABB77433.1| RBX1-like protein [Petunia integrifolia subsp. in... 217 2e-54 gb|AEI90836.1| RBX1 [Hevea brasiliensis] 216 4e-54 ref|XP_004144035.1| PREDICTED: RING-box protein 1a-like [Cucumis... 216 5e-54 >ref|XP_002278332.1| PREDICTED: RING-box protein 1a [Vitis vinifera] gi|147781652|emb|CAN64830.1| hypothetical protein VITISV_003357 [Vitis vinifera] gi|297738557|emb|CBI27802.3| unnamed protein product [Vitis vinifera] Length = 120 Score = 220 bits (560), Expect = 3e-55 Identities = 97/116 (83%), Positives = 104/116 (89%), Gaps = 2/116 (1%) Frame = -1 Query: 699 DTDINMVPADE--GAAGPXXXXXSKKPNKFDIKKWNAVSLWAWDIVVDNCAICRNHIMDL 526 D+D+ MVP E G+AGP KKP +F+IKKWNAV+LWAWDIVVDNCAICRNHIMDL Sbjct: 5 DSDVTMVPVGEPSGSAGPSSSSSCKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL 64 Query: 525 CIECQANQASATSDECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 358 CIECQANQASATS+ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH Sbjct: 65 CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 120 >ref|NP_001235984.1| uncharacterized protein LOC100526919 [Glycine max] gi|255631147|gb|ACU15939.1| unknown [Glycine max] Length = 118 Score = 218 bits (554), Expect = 1e-54 Identities = 95/114 (83%), Positives = 102/114 (89%) Frame = -1 Query: 699 DTDINMVPADEGAAGPXXXXXSKKPNKFDIKKWNAVSLWAWDIVVDNCAICRNHIMDLCI 520 D+D+ MVPA E + +KKP +F+IKKWNAVSLWAWDIVVDNCAICRNHIMDLCI Sbjct: 5 DSDVTMVPAGEPSTSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCI 64 Query: 519 ECQANQASATSDECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 358 ECQANQASATS+ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH Sbjct: 65 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118 >gb|ABB77433.1| RBX1-like protein [Petunia integrifolia subsp. inflata] Length = 116 Score = 217 bits (553), Expect = 2e-54 Identities = 97/114 (85%), Positives = 103/114 (90%) Frame = -1 Query: 699 DTDINMVPADEGAAGPXXXXXSKKPNKFDIKKWNAVSLWAWDIVVDNCAICRNHIMDLCI 520 D D+ MVPA EG+ G +KKP +F+IKKWNAVSLWAWDIVVDNCAICRNHIMDLCI Sbjct: 5 DIDVPMVPAGEGSTG--VGPSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCI 62 Query: 519 ECQANQASATSDECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 358 ECQANQASATS+ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH Sbjct: 63 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116 >gb|AEI90836.1| RBX1 [Hevea brasiliensis] Length = 116 Score = 216 bits (550), Expect = 4e-54 Identities = 98/117 (83%), Positives = 104/117 (88%), Gaps = 3/117 (2%) Frame = -1 Query: 699 DTDINMVPADEGA---AGPXXXXXSKKPNKFDIKKWNAVSLWAWDIVVDNCAICRNHIMD 529 DTD+ MVPA E + AGP KKP +F+IKKWNAV+LWAWDIVVDNCAICRNHIMD Sbjct: 2 DTDVTMVPAGEASSSVAGPSSST--KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 59 Query: 528 LCIECQANQASATSDECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 358 LCIECQANQASATS+ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH Sbjct: 60 LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116 >ref|XP_004144035.1| PREDICTED: RING-box protein 1a-like [Cucumis sativus] gi|449500506|ref|XP_004161116.1| PREDICTED: RING-box protein 1a-like [Cucumis sativus] Length = 117 Score = 216 bits (549), Expect = 5e-54 Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 2/116 (1%) Frame = -1 Query: 699 DTDINMVPADEGA--AGPXXXXXSKKPNKFDIKKWNAVSLWAWDIVVDNCAICRNHIMDL 526 DTD+ MVPA E + AGP KKP +F+IKKWNAV+LWAWDIVVDNCAICRNHIMDL Sbjct: 5 DTDVPMVPAGEASSSAGPSSS---KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL 61 Query: 525 CIECQANQASATSDECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 358 CIECQANQASATS+ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH Sbjct: 62 CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117