BLASTX nr result

ID: Coptis21_contig00012811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012811
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278332.1| PREDICTED: RING-box protein 1a [Vitis vinife...   220   3e-55
ref|NP_001235984.1| uncharacterized protein LOC100526919 [Glycin...   218   1e-54
gb|ABB77433.1| RBX1-like protein [Petunia integrifolia subsp. in...   217   2e-54
gb|AEI90836.1| RBX1 [Hevea brasiliensis]                              216   4e-54
ref|XP_004144035.1| PREDICTED: RING-box protein 1a-like [Cucumis...   216   5e-54

>ref|XP_002278332.1| PREDICTED: RING-box protein 1a [Vitis vinifera]
           gi|147781652|emb|CAN64830.1| hypothetical protein
           VITISV_003357 [Vitis vinifera]
           gi|297738557|emb|CBI27802.3| unnamed protein product
           [Vitis vinifera]
          Length = 120

 Score =  220 bits (560), Expect = 3e-55
 Identities = 97/116 (83%), Positives = 104/116 (89%), Gaps = 2/116 (1%)
 Frame = -1

Query: 699 DTDINMVPADE--GAAGPXXXXXSKKPNKFDIKKWNAVSLWAWDIVVDNCAICRNHIMDL 526
           D+D+ MVP  E  G+AGP      KKP +F+IKKWNAV+LWAWDIVVDNCAICRNHIMDL
Sbjct: 5   DSDVTMVPVGEPSGSAGPSSSSSCKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL 64

Query: 525 CIECQANQASATSDECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 358
           CIECQANQASATS+ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 65  CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 120


>ref|NP_001235984.1| uncharacterized protein LOC100526919 [Glycine max]
           gi|255631147|gb|ACU15939.1| unknown [Glycine max]
          Length = 118

 Score =  218 bits (554), Expect = 1e-54
 Identities = 95/114 (83%), Positives = 102/114 (89%)
 Frame = -1

Query: 699 DTDINMVPADEGAAGPXXXXXSKKPNKFDIKKWNAVSLWAWDIVVDNCAICRNHIMDLCI 520
           D+D+ MVPA E +        +KKP +F+IKKWNAVSLWAWDIVVDNCAICRNHIMDLCI
Sbjct: 5   DSDVTMVPAGEPSTSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCI 64

Query: 519 ECQANQASATSDECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 358
           ECQANQASATS+ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 65  ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118


>gb|ABB77433.1| RBX1-like protein [Petunia integrifolia subsp. inflata]
          Length = 116

 Score =  217 bits (553), Expect = 2e-54
 Identities = 97/114 (85%), Positives = 103/114 (90%)
 Frame = -1

Query: 699 DTDINMVPADEGAAGPXXXXXSKKPNKFDIKKWNAVSLWAWDIVVDNCAICRNHIMDLCI 520
           D D+ MVPA EG+ G      +KKP +F+IKKWNAVSLWAWDIVVDNCAICRNHIMDLCI
Sbjct: 5   DIDVPMVPAGEGSTG--VGPSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCI 62

Query: 519 ECQANQASATSDECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 358
           ECQANQASATS+ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 63  ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116


>gb|AEI90836.1| RBX1 [Hevea brasiliensis]
          Length = 116

 Score =  216 bits (550), Expect = 4e-54
 Identities = 98/117 (83%), Positives = 104/117 (88%), Gaps = 3/117 (2%)
 Frame = -1

Query: 699 DTDINMVPADEGA---AGPXXXXXSKKPNKFDIKKWNAVSLWAWDIVVDNCAICRNHIMD 529
           DTD+ MVPA E +   AGP      KKP +F+IKKWNAV+LWAWDIVVDNCAICRNHIMD
Sbjct: 2   DTDVTMVPAGEASSSVAGPSSST--KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD 59

Query: 528 LCIECQANQASATSDECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 358
           LCIECQANQASATS+ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 60  LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 116


>ref|XP_004144035.1| PREDICTED: RING-box protein 1a-like [Cucumis sativus]
           gi|449500506|ref|XP_004161116.1| PREDICTED: RING-box
           protein 1a-like [Cucumis sativus]
          Length = 117

 Score =  216 bits (549), Expect = 5e-54
 Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 2/116 (1%)
 Frame = -1

Query: 699 DTDINMVPADEGA--AGPXXXXXSKKPNKFDIKKWNAVSLWAWDIVVDNCAICRNHIMDL 526
           DTD+ MVPA E +  AGP      KKP +F+IKKWNAV+LWAWDIVVDNCAICRNHIMDL
Sbjct: 5   DTDVPMVPAGEASSSAGPSSS---KKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL 61

Query: 525 CIECQANQASATSDECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 358
           CIECQANQASATS+ECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Sbjct: 62  CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 117


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