BLASTX nr result
ID: Coptis21_contig00012804
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00012804
(1163 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABS52645.1| GEM-like 1 [Vitis vinifera] 147 4e-56
ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera] 145 2e-55
ref|XP_002301081.1| predicted protein [Populus trichocarpa] gi|2... 145 4e-54
emb|CBI19231.3| unnamed protein product [Vitis vinifera] 145 2e-53
ref|XP_002307347.1| predicted protein [Populus trichocarpa] gi|2... 142 3e-53
>gb|ABS52645.1| GEM-like 1 [Vitis vinifera]
Length = 284
Score = 147 bits (372), Expect(3) = 4e-56
Identities = 68/87 (78%), Positives = 81/87 (93%)
Frame = +3
Query: 654 ATVKNTVSTVKDVLGKWGKKVGESTKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVI 833
+++KN + +VKDVLGKWGKK E+TK+AE LAGN+WQHL+TGPSFADAA+GRIAQGTKV+
Sbjct: 98 SSMKNKMDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVL 157
Query: 834 AEGGYEKIFQQTFETVSEEQLQRTYAC 914
AEGGYEKIFQQTFETV EEQLQ++YAC
Sbjct: 158 AEGGYEKIFQQTFETVPEEQLQKSYAC 184
Score = 91.3 bits (225), Expect(3) = 4e-56
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 1021 LSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEWSYYKVVIPLH 1161
LSTSAGPVMGILY+ST KLAFCSD+PL YKVGEQ EWSYYKVVIPLH
Sbjct: 186 LSTSAGPVMGILYLSTEKLAFCSDSPLSYKVGEQTEWSYYKVVIPLH 232
Score = 27.7 bits (60), Expect(3) = 4e-56
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +2
Query: 329 PKSPLNTIPISSNQDEPDPLNSNKVQSKSVTWSTELTRESPHPSSLPGYVESAAATSMPP 508
PK T+ ISS P NS S+S + E P P + +AT+MP
Sbjct: 38 PKEDWTTVTISSQTPHPVSQNSGSPISESAS-------EGPAP------IARNSATTMPV 84
Query: 509 RDNNPYVNA 535
++NPY+++
Sbjct: 85 -ESNPYISS 92
>ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera]
Length = 284
Score = 145 bits (366), Expect(3) = 2e-55
Identities = 67/87 (77%), Positives = 80/87 (91%)
Frame = +3
Query: 654 ATVKNTVSTVKDVLGKWGKKVGESTKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVI 833
+++KN + +VKDVLGKWGKK E+TK+AE LAGN+WQHL+ GPSFADAA+GRIAQGTKV+
Sbjct: 98 SSMKNKMDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKMGPSFADAAVGRIAQGTKVL 157
Query: 834 AEGGYEKIFQQTFETVSEEQLQRTYAC 914
AEGGYEKIFQQTFETV EEQLQ++YAC
Sbjct: 158 AEGGYEKIFQQTFETVPEEQLQKSYAC 184
Score = 91.3 bits (225), Expect(3) = 2e-55
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 1021 LSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEWSYYKVVIPLH 1161
LSTSAGPVMGILY+ST KLAFCSD+PL YKVGEQ EWSYYKVVIPLH
Sbjct: 186 LSTSAGPVMGILYLSTEKLAFCSDSPLSYKVGEQTEWSYYKVVIPLH 232
Score = 27.7 bits (60), Expect(3) = 2e-55
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +2
Query: 329 PKSPLNTIPISSNQDEPDPLNSNKVQSKSVTWSTELTRESPHPSSLPGYVESAAATSMPP 508
PK T+ ISS P NS S+S + E P P + +AT+MP
Sbjct: 38 PKEDWTTVTISSQTPHPVSQNSGSPISESAS-------EGPAP------IARNSATTMPV 84
Query: 509 RDNNPYVNA 535
++NPY+++
Sbjct: 85 -ESNPYISS 92
>ref|XP_002301081.1| predicted protein [Populus trichocarpa] gi|222842807|gb|EEE80354.1|
predicted protein [Populus trichocarpa]
Length = 290
Score = 145 bits (366), Expect(2) = 4e-54
Identities = 68/84 (80%), Positives = 77/84 (91%)
Frame = +3
Query: 663 KNTVSTVKDVLGKWGKKVGESTKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVIAEG 842
KNTV VKDVLGKWGKK E+TK+AE LAGN+WQHL+TGPSFADAA+GRIAQGTKV+AEG
Sbjct: 106 KNTVEAVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEG 165
Query: 843 GYEKIFQQTFETVSEEQLQRTYAC 914
GYEKIFQQTFETV EE+L +T+AC
Sbjct: 166 GYEKIFQQTFETVPEEKLVKTFAC 189
Score = 94.0 bits (232), Expect(2) = 4e-54
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = +1
Query: 1021 LSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEWSYYKVVIPLH 1161
LSTSAGPVMG+LY+STAKLAFCSDNPL YKVGEQ++WSYYKVVIPLH
Sbjct: 191 LSTSAGPVMGVLYLSTAKLAFCSDNPLSYKVGEQSQWSYYKVVIPLH 237
>emb|CBI19231.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 145 bits (366), Expect(2) = 2e-53
Identities = 67/87 (77%), Positives = 80/87 (91%)
Frame = +3
Query: 654 ATVKNTVSTVKDVLGKWGKKVGESTKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVI 833
+++KN + +VKDVLGKWGKK E+TK+AE LAGN+WQHL+ GPSFADAA+GRIAQGTKV+
Sbjct: 17 SSMKNKMDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKMGPSFADAAVGRIAQGTKVL 76
Query: 834 AEGGYEKIFQQTFETVSEEQLQRTYAC 914
AEGGYEKIFQQTFETV EEQLQ++YAC
Sbjct: 77 AEGGYEKIFQQTFETVPEEQLQKSYAC 103
Score = 91.3 bits (225), Expect(2) = 2e-53
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 1021 LSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEWSYYKVVIPLH 1161
LSTSAGPVMGILY+ST KLAFCSD+PL YKVGEQ EWSYYKVVIPLH
Sbjct: 105 LSTSAGPVMGILYLSTEKLAFCSDSPLSYKVGEQTEWSYYKVVIPLH 151
>ref|XP_002307347.1| predicted protein [Populus trichocarpa] gi|222856796|gb|EEE94343.1|
predicted protein [Populus trichocarpa]
Length = 294
Score = 142 bits (357), Expect(2) = 3e-53
Identities = 66/84 (78%), Positives = 76/84 (90%)
Frame = +3
Query: 663 KNTVSTVKDVLGKWGKKVGESTKQAEVLAGNVWQHLRTGPSFADAAMGRIAQGTKVIAEG 842
KN + VKDVLGKWGKK E+TK+AE LAGN+WQHL+TGPSFADAA+GRIAQGTKV+AEG
Sbjct: 110 KNKMEAVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEG 169
Query: 843 GYEKIFQQTFETVSEEQLQRTYAC 914
GYEKIF+QTFETV EEQL +T+AC
Sbjct: 170 GYEKIFRQTFETVPEEQLVKTFAC 193
Score = 94.4 bits (233), Expect(2) = 3e-53
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +1
Query: 1021 LSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEWSYYKVVIPLH 1161
LSTSAGPVMG+LY+STAKLAFCSDNPL YK+GEQ EWSYYKVVIPLH
Sbjct: 195 LSTSAGPVMGVLYLSTAKLAFCSDNPLSYKIGEQTEWSYYKVVIPLH 241