BLASTX nr result

ID: Coptis21_contig00012791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012791
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515549.1| conserved hypothetical protein [Ricinus comm...   325   9e-87
ref|XP_004136472.1| PREDICTED: U-box domain-containing protein 1...   304   3e-80
ref|XP_003603432.1| hypothetical protein MTR_3g107650 [Medicago ...   283   4e-74
ref|XP_002308651.1| predicted protein [Populus trichocarpa] gi|2...   282   1e-73
ref|XP_004167730.1| PREDICTED: LOW QUALITY PROTEIN: U-box domain...    94   6e-17

>ref|XP_002515549.1| conserved hypothetical protein [Ricinus communis]
           gi|223545493|gb|EEF46998.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 358

 Score =  325 bits (834), Expect = 9e-87
 Identities = 172/299 (57%), Positives = 215/299 (71%)
 Frame = +2

Query: 83  ETFTQCLVEAQSDSREAQRKALRTLASLTKVSPPNRNLLAQIDGTIAXXXXXXXXXXXXX 262
           ET  QC+ +AQSDS E Q+KAL TLAS+TKVSP NR+L+AQ DG I+             
Sbjct: 59  ETIAQCVSDAQSDSIEVQQKALHTLASMTKVSPHNRSLVAQTDGAISAFLMLTESSSPII 118

Query: 263 XXXXXCILFNLSLNNNLKHVLADMETIYHLNSIILAPTSPESGKFAASLICSLSMLNKNK 442
                 ILFNLSLN +LK  LADM+TI  LNS+I++  S +S + A+SL+CSL+ML+KNK
Sbjct: 119 ETLALAILFNLSLNPDLKQSLADMDTINLLNSVIVSSRSLQSSRLASSLVCSLAMLDKNK 178

Query: 443 ARFGVTGTIQALVKVLGEPRCPXXXXXXXXXXELVQFHGNCTLAVWAGVVPVLIQIVESN 622
           A+FGV GTIQ LV  +  PR P          ELVQFHGNCT+AV +G V VLI+IVES 
Sbjct: 179 AKFGVAGTIQILVDAVSGPRGPATHHLLSSLAELVQFHGNCTVAVRSGAVEVLIRIVEST 238

Query: 623 GSEDLAGSALAIMGLLARYEEGMNEIRDKEGVVSLLVDVLGRRCMLSKEGAADVLLRLFD 802
           G EDLAG++LAI+GLLAR+EEG+N +   + +VS + DVL  RCML KEGAA++L+RLFD
Sbjct: 239 GGEDLAGTSLAILGLLARFEEGLNALIRSDHIVSCMADVLKGRCMLGKEGAAEILVRLFD 298

Query: 803 ESEGCMRDAARLPEFSSMLADISVRGSAMAREKAIQLMKKMMDADLDTYLEPDPEYYHW 979
           ESE C+RDA  LPEFS++LADISVRGS+ AREKA QLMKKM +A LD Y + +  +  W
Sbjct: 299 ESEDCVRDALELPEFSTVLADISVRGSSRAREKAAQLMKKMTEASLDPYFDTNSMFIQW 357


>ref|XP_004136472.1| PREDICTED: U-box domain-containing protein 11-like [Cucumis
           sativus] gi|449503554|ref|XP_004162060.1| PREDICTED:
           U-box domain-containing protein 11-like [Cucumis
           sativus]
          Length = 320

 Score =  304 bits (778), Expect = 3e-80
 Identities = 156/299 (52%), Positives = 211/299 (70%)
 Frame = +2

Query: 83  ETFTQCLVEAQSDSREAQRKALRTLASLTKVSPPNRNLLAQIDGTIAXXXXXXXXXXXXX 262
           +T T+C+  A+SD+ E Q KAL+ L ++T+VSP +RNLL Q+DG+I+             
Sbjct: 22  KTITECMAGARSDAHEVQEKALQNLVTITQVSPLHRNLLVQVDGSISTLIGLSKSSSSTI 81

Query: 263 XXXXXCILFNLSLNNNLKHVLADMETIYHLNSIILAPTSPESGKFAASLICSLSMLNKNK 442
                 ILFNLSLN+++K +LA METIYHLN++I +  SP++ K ++SLICSL+ML+KNK
Sbjct: 82  QSLSLSILFNLSLNHDMKKLLASMETIYHLNTLI-SLGSPDTVKLSSSLICSLAMLDKNK 140

Query: 443 ARFGVTGTIQALVKVLGEPRCPXXXXXXXXXXELVQFHGNCTLAVWAGVVPVLIQIVESN 622
           A+FGV GTIQ LV+ L  P  P          EL QFHGNCT+AV +G + VLI +VES 
Sbjct: 141 AKFGVAGTIQLLVRALKVPNIPAAHHLLCSLAELGQFHGNCTVAVRSGAIQVLISVVEST 200

Query: 623 GSEDLAGSALAIMGLLARYEEGMNEIRDKEGVVSLLVDVLGRRCMLSKEGAADVLLRLFD 802
             EDLAG+AL ++GLLAR+EEG+  +   + +V  +V+VL  RCMLSKEGA ++LLRLFD
Sbjct: 201 SGEDLAGTALVVLGLLARFEEGLRALIKTDRIVISMVNVLKGRCMLSKEGATEILLRLFD 260

Query: 803 ESEGCMRDAARLPEFSSMLADISVRGSAMAREKAIQLMKKMMDADLDTYLEPDPEYYHW 979
           ESEGC+ DA++LPEF  ++AD+SVRGSA ARE+A  LM K+M++D D+Y   D  Y  W
Sbjct: 261 ESEGCLSDASKLPEFFGVIADLSVRGSAKARERASLLMNKIMNSDFDSYSNSDSVYSQW 319


>ref|XP_003603432.1| hypothetical protein MTR_3g107650 [Medicago truncatula]
           gi|355492480|gb|AES73683.1| hypothetical protein
           MTR_3g107650 [Medicago truncatula]
          Length = 316

 Score =  283 bits (725), Expect = 4e-74
 Identities = 154/301 (51%), Positives = 205/301 (68%), Gaps = 5/301 (1%)
 Frame = +2

Query: 68  SEKLLETFTQCLVEAQSDSREAQRKALRTLASLTKVSPPNRNLLAQIDGTIAXXXXXXXX 247
           S ++ +T  +CL+  QSDS E Q K L+TLA++TKVSP NR LLAQIDG I+        
Sbjct: 8   SSRVFDTINECLILVQSDSHETQEKGLQTLAAVTKVSPQNRTLLAQIDGAISTLATLTNA 67

Query: 248 XXXXXXXXXXCILFNLSLNNNLKHVLADMETIYHLNSIILAPT-SPESGKFAASLICSLS 424
                      +LFNLSLN +LK  LADMETIYHLNS+I + + S +S K A+SLICSL+
Sbjct: 68  SSSIIQTLSLLVLFNLSLNLDLKQSLADMETIYHLNSLINSSSCSIDSCKLASSLICSLA 127

Query: 425 MLNKNKARFGVTGTIQALVKVLGEPRCPXXXXXXXXXX--ELVQFHGNCTLAVWAGVVPV 598
           M +KNKA+FGV GT+Q LVK +                  ELVQFHGNCTLAV  GVVPV
Sbjct: 128 MFDKNKAKFGVAGTVQLLVKAIESSLLDSADSHHLLSSLAELVQFHGNCTLAVRGGVVPV 187

Query: 599 LIQIVES--NGSEDLAGSALAIMGLLARYEEGMNEIRDKEGVVSLLVDVLGRRCMLSKEG 772
           L+Q+V+S  N +EDLAG++L ++GLL R++EG+N ++    ++S ++  L RR +L KEG
Sbjct: 188 LLQVVQSTDNNNEDLAGTSLTVLGLLVRFDEGLNAVKKTNEIISSMLSALRRRSLLCKEG 247

Query: 773 AADVLLRLFDESEGCMRDAARLPEFSSMLADISVRGSAMAREKAIQLMKKMMDADLDTYL 952
           A D+L+RLFD+S+ C+R+A    EFSS+LADISVRGSA  R+KA  LM+K+    L+T +
Sbjct: 248 AVDILVRLFDDSDECVREAFMFSEFSSLLADISVRGSARVRDKADLLMRKIAKVSLETNM 307

Query: 953 E 955
           E
Sbjct: 308 E 308


>ref|XP_002308651.1| predicted protein [Populus trichocarpa] gi|222854627|gb|EEE92174.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score =  282 bits (721), Expect = 1e-73
 Identities = 159/311 (51%), Positives = 201/311 (64%), Gaps = 1/311 (0%)
 Frame = +2

Query: 50  KKGKKMSE-KLLETFTQCLVEAQSDSREAQRKALRTLASLTKVSPPNRNLLAQIDGTIAX 226
           K  K MS  +L ET T+CL + QSDS +AQRKAL+TLA+LTKVSP NR+LLAQ DG ++ 
Sbjct: 108 KTSKTMSATRLRETITECLADVQSDSVDAQRKALQTLAALTKVSPQNRSLLAQTDGVVST 167

Query: 227 XXXXXXXXXXXXXXXXXCILFNLSLNNNLKHVLADMETIYHLNSIILAPTSPESGKFAAS 406
                             ILFNLSLN +L                               
Sbjct: 168 LLTLTKISSSIIRILALSILFNLSLNPDL------------------------------- 196

Query: 407 LICSLSMLNKNKARFGVTGTIQALVKVLGEPRCPXXXXXXXXXXELVQFHGNCTLAVWAG 586
              +L+ML+KNKA+FGV GT+Q LV  +  PRCP          ELVQFHGNCT+AV +G
Sbjct: 197 ---NLAMLDKNKAKFGVAGTVQVLVGAISGPRCPASHHLLSSLAELVQFHGNCTVAVRSG 253

Query: 587 VVPVLIQIVESNGSEDLAGSALAIMGLLARYEEGMNEIRDKEGVVSLLVDVLGRRCMLSK 766
            V VLI +VES   EDLAG++LA++G LAR+ EG+N +   + +VS +++VL  RCMLSK
Sbjct: 254 AVQVLIGVVESTDGEDLAGTSLAVLGHLARFNEGLNALIRTDQIVSSMLNVLRGRCMLSK 313

Query: 767 EGAADVLLRLFDESEGCMRDAARLPEFSSMLADISVRGSAMAREKAIQLMKKMMDADLDT 946
           EGAA++LLRLFDESEGC+RDA RLPEFSS+LADISVRGS+ AREKA QL+KKM+DA+LD 
Sbjct: 314 EGAAEILLRLFDESEGCVRDAFRLPEFSSVLADISVRGSSKAREKANQLLKKMVDANLDP 373

Query: 947 YLEPDPEYYHW 979
           Y + +  +  W
Sbjct: 374 YTDGNSLFLPW 384


>ref|XP_004167730.1| PREDICTED: LOW QUALITY PROTEIN: U-box domain-containing protein
            13-like [Cucumis sativus]
          Length = 671

 Score = 94.0 bits (232), Expect = 6e-17
 Identities = 81/275 (29%), Positives = 130/275 (47%)
 Frame = +2

Query: 101  LVEAQSDSREAQRKALRTLASLTKVSPPNRNLLAQIDGTIAXXXXXXXXXXXXXXXXXXC 280
            L +  S + E QR A   +  L K +  NR  +A+  G I                    
Sbjct: 361  LCKLASGNPEDQRSAAGEIRLLAKRNADNRVAIAEA-GAIPLLVGLLSTPDSRVQEHAVT 419

Query: 281  ILFNLSLNNNLKHVLADMETIYHLNSIILAPTSPESGKFAASLICSLSMLNKNKARFGVT 460
             L NLS+  + K  +     +  +  ++L   S E+ + AA+ + SLS++++NK R G +
Sbjct: 420  ALLNLSICEDNKGSIISSGAVPGI-VLVLKKGSMEARENAAATLFSLSVIDENKVRIGAS 478

Query: 461  GTIQALVKVLGEPRCPXXXXXXXXXXELVQFHGNCTLAVWAGVVPVLIQIVESNGSEDLA 640
            G I  LV +L E               L  + GN   AV AGVVP L+Q++       + 
Sbjct: 479  GAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGRAVRAGVVPTLMQLL--TPGTGMV 536

Query: 641  GSALAIMGLLARYEEGMNEIRDKEGVVSLLVDVLGRRCMLSKEGAADVLLRLFDESEGCM 820
              ALAI+ +LA + EG   IR  +  V +LVDV+G     ++E AA VL+ L    E  +
Sbjct: 537  DEALAILAILASHSEGKGAIRSAK-AVPVLVDVIGTGSPRNRENAAAVLVHLCSGDEQLL 595

Query: 821  RDAARLPEFSSMLADISVRGSAMAREKAIQLMKKM 925
             +A  L   SS++ D++  G+   + KA QL++++
Sbjct: 596  VEARELGVISSLI-DLARNGTDRGKRKAAQLLERI 629


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