BLASTX nr result

ID: Coptis21_contig00012776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012776
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284383.1| PREDICTED: oxysterol-binding protein-related...   148   6e-34
ref|XP_002307418.1| predicted protein [Populus trichocarpa] gi|2...   145   6e-33
ref|XP_002872370.1| oxysterol-binding family protein [Arabidopsi...   142   3e-32
ref|NP_001236590.1| oxysterol-binding protein [Glycine max] gi|1...   142   5e-32
ref|NP_180659.1| oxysterol binding protein-related protein 1A [A...   141   9e-32

>ref|XP_002284383.1| PREDICTED: oxysterol-binding protein-related protein 1C [Vitis
           vinifera] gi|302141870|emb|CBI19073.3| unnamed protein
           product [Vitis vinifera]
          Length = 797

 Score =  148 bits (374), Expect = 6e-34
 Identities = 87/159 (54%), Positives = 101/159 (63%), Gaps = 7/159 (4%)
 Frame = +3

Query: 135 RSNSMNHRTRQXXXXXXXXXXXXXXXGNGNKQLTNHKSFSRLPSMQEPPP-----RDVKI 299
           RSN++NH                    N    +T+H   +   SM  PP      R+VKI
Sbjct: 46  RSNNLNH--------------------NHGNNITDHGRLTE--SMSRPPSICGDQREVKI 83

Query: 300 INDIVGGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKTHGPDKI--QDFDTKSTKII 473
            NDIVG NGISGILYKWVNYGKGWRPRWFVLQDGVLSYYK HGPDKI       K +K+I
Sbjct: 84  -NDIVG-NGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVNQETEKGSKVI 141

Query: 474 GEDSFRFVSRHKNHSPLSHSHPNPVGEVHLKVSSIRESK 590
           GE+S R ++RH+N +  S    NPVGEVHLKVSS+RESK
Sbjct: 142 GEESLRRINRHRNGN--SQLRRNPVGEVHLKVSSVRESK 178


>ref|XP_002307418.1| predicted protein [Populus trichocarpa] gi|222856867|gb|EEE94414.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  145 bits (365), Expect = 6e-33
 Identities = 79/121 (65%), Positives = 89/121 (73%), Gaps = 3/121 (2%)
 Frame = +3

Query: 237 NHKSFSRLPSMQEPPPRDVKI-INDIVGGNGISGILYKWVNYGKGWRPRWFVLQDGVLSY 413
           N  S  R+ S +E P   V + INDIVG NGISGILYKWVNYGKGWRPRWFVLQDGVLSY
Sbjct: 76  NRMSHQRVSSAREQPLIQVDVKINDIVG-NGISGILYKWVNYGKGWRPRWFVLQDGVLSY 134

Query: 414 YKTHGPDKI--QDFDTKSTKIIGEDSFRFVSRHKNHSPLSHSHPNPVGEVHLKVSSIRES 587
           YK HGPDKI       K +KIIGE+S R +SR KN +  S +   PVGE+HLKVSSIRES
Sbjct: 135 YKIHGPDKILVNQETEKGSKIIGEESMRRISRPKNGN--SQNRRKPVGEIHLKVSSIRES 192

Query: 588 K 590
           +
Sbjct: 193 R 193


>ref|XP_002872370.1| oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318207|gb|EFH48629.1| oxysterol-binding family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 821

 Score =  142 bits (359), Expect = 3e-32
 Identities = 93/217 (42%), Positives = 111/217 (51%), Gaps = 22/217 (10%)
 Frame = +3

Query: 6   PGLIPTPSQRQGLKIFTTISSVNFDFFYDLLLPHATMSQMPTVR---SNSMNHRTRQXXX 176
           P + P P  +  L I    SS           P  +    P +    S S NH + Q   
Sbjct: 15  PSMPPLPEPQPPLPIHAAASSAT---------PFGSARSEPIISRSASQSYNHHSGQL-- 63

Query: 177 XXXXXXXXXXXXGNGNKQLTNHKSFSR--------------LPSMQEPPPRDVKIINDIV 314
                        N N+ L +  SF+               LP+    PP DVKI NDIV
Sbjct: 64  -------------NNNQNLIHSLSFNHQSDVANRLGQRVLALPAAVREPPNDVKI-NDIV 109

Query: 315 GGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKTHGPDKI--QDFDTKSTKIIGEDSF 488
           G NGI+GILYKWVNYG+GWRPRWFVLQDGVLSYYK HGPDKI       K +K+IG++S 
Sbjct: 110 G-NGIAGILYKWVNYGRGWRPRWFVLQDGVLSYYKIHGPDKIFVSPETEKGSKVIGDESA 168

Query: 489 RFVSRHKNHSPLSHS---HPNPVGEVHLKVSSIRESK 590
           R +SRH      S S      P GEVHLKVSS+RES+
Sbjct: 169 RMISRHHRRGGSSSSCQLRRKPFGEVHLKVSSVRESR 205


>ref|NP_001236590.1| oxysterol-binding protein [Glycine max]
           gi|164457637|dbj|BAF96543.1| oxysterol-binding protein
           [Glycine max]
          Length = 789

 Score =  142 bits (357), Expect = 5e-32
 Identities = 77/121 (63%), Positives = 89/121 (73%), Gaps = 3/121 (2%)
 Frame = +3

Query: 237 NHK-SFSRLPSMQEPPPRDVKIINDIVGGNGISGILYKWVNYGKGWRPRWFVLQDGVLSY 413
           +HK S S   S +E P  DVKI ND+VG NGISGILYKWVNYGKGWRPRWFVLQDGVLSY
Sbjct: 47  SHKHSHSHSGSQREQPVVDVKI-NDLVG-NGISGILYKWVNYGKGWRPRWFVLQDGVLSY 104

Query: 414 YKTHGPDKI--QDFDTKSTKIIGEDSFRFVSRHKNHSPLSHSHPNPVGEVHLKVSSIRES 587
           YK HGPDKI       K + +IGE+S R ++R++N  P  H    P GE+HLKVS+IRES
Sbjct: 105 YKIHGPDKIVVNPETEKGSMVIGEESMRRITRNRNSYPSQHIR-KPFGEIHLKVSTIRES 163

Query: 588 K 590
           K
Sbjct: 164 K 164


>ref|NP_180659.1| oxysterol binding protein-related protein 1A [Arabidopsis thaliana]
           gi|75099961|sp|O80866.1|ORP1A_ARATH RecName:
           Full=Oxysterol-binding protein-related protein 1A;
           AltName: Full=OSBP-related protein 1A
           gi|3201627|gb|AAC20736.1| putative oxysterol-binding
           protein [Arabidopsis thaliana]
           gi|330253385|gb|AEC08479.1| oxysterol binding
           protein-related protein 1A [Arabidopsis thaliana]
          Length = 760

 Score =  141 bits (355), Expect = 9e-32
 Identities = 74/124 (59%), Positives = 90/124 (72%), Gaps = 6/124 (4%)
 Frame = +3

Query: 237 NHKSFSRLPSMQEPPPRDVKIINDIVGGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYY 416
           NH++   LP+    PP DVKI NDI G N I+GILYKWVNYGKGWRPRWFVLQDGVLSYY
Sbjct: 45  NHQNVLALPAAAREPPVDVKI-NDIAG-NSIAGILYKWVNYGKGWRPRWFVLQDGVLSYY 102

Query: 417 KTHGPDKIQDF--DTKSTKIIGEDSFRFVSRHKNHSPLSHSH----PNPVGEVHLKVSSI 578
           K  GPDKI       K +++IGE+S R +SR+K H+  ++++      P GEVHLKVSSI
Sbjct: 103 KIKGPDKIVVIHETEKGSRVIGEESTRMISRNKRHAATNNTNHQLRRKPFGEVHLKVSSI 162

Query: 579 RESK 590
           RES+
Sbjct: 163 RESR 166


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