BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012752
         (1139 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa]         232   1e-58
ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta...   229   1e-57
ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medic...   223   5e-56
dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]     223   9e-56
gb|AFK47692.1| unknown [Medicago truncatula]                          221   3e-55

>gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa]
          Length = 301

 Score =  232 bits (592), Expect = 1e-58
 Identities = 129/282 (45%), Positives = 179/282 (63%), Gaps = 3/282 (1%)
 Frame = +2

Query: 128 KPMKVSMSQNQTSWAATINSEVEAHIKQALIGRNPASVYHPMNHLIFEIPRSMAPALCIA 307
           KP  V MS  QT + A+++++VEAH+KQ +  + P  V+ PM+HLIF  P++  PALC+A
Sbjct: 33  KPTTVRMSMTQTPYWASLHADVEAHLKQTITIKEPLLVFEPMHHLIFTAPKTTVPALCLA 92

Query: 308 ACESVGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPKTKPMP--HHVYGANIELLTAD 481
           ACE VGG++ +AI+AASAL LM  +TYTHE+L LSD+P  KP P   HVYG N+ELLT D
Sbjct: 93  ACELVGGQRQEAISAASALLLMEAATYTHEHLPLSDRPGPKPGPMIDHVYGPNVELLTGD 152

Query: 482 SMVPFAYELLAAMDDPTNTNSDRILSVMIEIGRAVGS-QGMVNGQYLKVRCLGLDGDEPC 658
            +VPF +ELLA  D     NS+RIL VM+EI RAVGS  G+++ QY+K    G DGDE C
Sbjct: 153 GIVPFGFELLARSDG--GENSERILKVMVEISRAVGSGGGVIDAQYMKTLGGGSDGDEIC 210

Query: 659 ETEMVDQVFEKKGGALYSXXXXXXXXXXXXTDEEIEKLRRYGLYVGMMHGIMVYDAAIKE 838
             E + +V EK  G L+S             +EEIE+LR++G YVG++ G++ +      
Sbjct: 211 HVEEIRRVVEKYEGRLHSCGAVCGGVLGGGCEEEIERLRKFGFYVGIIQGMIKWGFKEDH 270

Query: 839 KRLVKLADDLKYLALRELEGMKEKNVEPLWSLIDGISVFLRV 964
           K +V    + + LA++EL+  K+K V       D I  FL +
Sbjct: 271 KEVV----EARNLAIQELKFFKDKEV-------DAIKTFLNI 301


>ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
           gi|223527725|gb|EEF29831.1| geranyl geranyl
           pyrophosphate synthase, putative [Ricinus communis]
          Length = 308

 Score =  229 bits (583), Expect = 1e-57
 Identities = 127/270 (47%), Positives = 174/270 (64%), Gaps = 3/270 (1%)
 Frame = +2

Query: 140 VSMSQNQTSWAATINSEVEAHIKQALIGRNPASVYHPMNHLIFEIPRSMAPALCIAACES 319
           V  + ++  +   IN+++E H+K+A+  R P  V+ PM+HL F  PRS APALCIAACE 
Sbjct: 39  VMSNSSKIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPALCIAACEL 98

Query: 320 VGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPK--TKPMPHHVYGANIELLTADSMVP 493
           VGG +DQA+AAASAL LM  + +THE + L+D+P+   +PM HH +G NIELLT D M+P
Sbjct: 99  VGGSRDQALAAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTFGPNIELLTGDGMIP 158

Query: 494 FAYELLAAMDDPTNTNSDRILSVMIEIGRAVGSQGMVNGQYLKVRCLGLDGDEPCETEMV 673
           FA+ELLA +++P   NSDRIL VMIEI RA+GSQGMV GQY + +     GDE      +
Sbjct: 159 FAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGDELFHVAWL 218

Query: 674 DQVFEKKGGALYSXXXXXXXXXXXXTDEEIEKLRRYGLYVGMMHGIMVYDAAIKEKRLVK 853
             V +KK GA ++             +EEIEKLRRYGLYVG + GI        E+  +K
Sbjct: 219 RDVCKKKEGASHACAGACGAILGGGNEEEIEKLRRYGLYVGTIQGI-YNKVEGNEEWSLK 277

Query: 854 LADDLKYLALRELEGM-KEKNVEPLWSLID 940
             + L+ LAL+EL+   +E+ V  + SL++
Sbjct: 278 EVNKLRDLALKELKDFNEEEKVRAICSLVE 307


>ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
           gi|355518891|gb|AET00515.1| Geranylgeranyl pyrophosphate
           synthase [Medicago truncatula]
          Length = 297

 Score =  223 bits (569), Expect = 5e-56
 Identities = 123/280 (43%), Positives = 177/280 (63%), Gaps = 1/280 (0%)
 Frame = +2

Query: 128 KPMKVSMSQNQTSWAATINSEVEAHIKQALIGRNPASVYHPMNHLIFEIPRSMAPALCIA 307
           K   + MS  QT + A++++++EAH+KQ +  + P  V+ PM+HLIF  P++  PALC+A
Sbjct: 33  KSTTLRMSMTQTPYWASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLA 92

Query: 308 ACESVGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPKTKPMPHHVYGANIELLTADSM 487
            CE VGG++ QAI+AASAL LM  +TYTHE+L L+D+P  +PM +HVYG N+ELLT D +
Sbjct: 93  TCELVGGQRHQAISAASALLLMEAATYTHEHLPLTDRP--RPMINHVYGPNMELLTGDGI 150

Query: 488 VPFAYELLAAMDDPTNTNSDRILSVMIEIGRAVGS-QGMVNGQYLKVRCLGLDGDEPCET 664
           VPF +ELLA  D     NS+RIL VM+EI RAVGS  G+++ QY K+   G DG+E C  
Sbjct: 151 VPFGFELLARSDG--GENSERILKVMVEISRAVGSGGGVIDAQYGKILYSGSDGEEKCHV 208

Query: 665 EMVDQVFEKKGGALYSXXXXXXXXXXXXTDEEIEKLRRYGLYVGMMHGIMVYDAAIKEKR 844
           E +  V EK  G L+S             +EEIE+LR++G YVG++ G++ +      K 
Sbjct: 209 EEIRHVVEKYEGRLHSCGAVCGGVLGGGCEEEIERLRKFGYYVGIIQGMIKWGFKEDHKE 268

Query: 845 LVKLADDLKYLALRELEGMKEKNVEPLWSLIDGISVFLRV 964
           +V    + + LA++EL+  K+K V       D I  FL +
Sbjct: 269 VV----EARNLAIQELKFFKDKEV-------DAIKTFLNI 297


>dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score =  223 bits (567), Expect = 9e-56
 Identities = 121/277 (43%), Positives = 182/277 (65%), Gaps = 5/277 (1%)
 Frame = +2

Query: 125 YKPMKVSMSQNQTSWAATINSEVEAHIKQALIGRNPASVYHPMNHLIFEIPRSMAPALCI 304
           ++PM V+MS +Q+ W++ +N++++ H+KQA+  R P +V+ PM HLI   P++ APALCI
Sbjct: 30  HRPMVVAMSTDQSYWSS-VNADLDTHLKQAIPIRQPLAVFEPMRHLILSAPQTSAPALCI 88

Query: 305 AACESVGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPKTKPMPHH---VYGANIELLT 475
           AACE VGG ++QA+AAASAL L+H S  THE L L+D+P+  PMP     +YG NIELL 
Sbjct: 89  AACELVGGHRNQAMAAASALRLVHASASTHENLPLTDRPR--PMPRTRPTLYGPNIELLI 146

Query: 476 ADSMVPFAYELLAAMDDPTNTNSDRILSVMIEIGRAVGSQGMVNGQYLKVRCLGLDGDEP 655
           AD ++P+ +ELLA  DD    NS+R+L  +IEI RA+GSQG++ GQY + +    +G+E 
Sbjct: 147 ADGIIPYGFELLARDDDAAENNSNRVLRAIIEISRAMGSQGVIEGQYNESQYEESEGEEI 206

Query: 656 CETEMVDQVFEKKGGALYSXXXXXXXXXXXXTDEEIEKLRRYGLYVGMMHGIMVYDAAIK 835
                +  V  KK G L++            +++EIEKLRRYGLYVGM+ GI+   + + 
Sbjct: 207 FHVGWLQNVCRKKEGTLHACAGACGAILGGGSEDEIEKLRRYGLYVGMVQGIL---SKVD 263

Query: 836 EKR--LVKLADDLKYLALRELEGMKEKNVEPLWSLID 940
           E++   VK  + L+ LAL+EL+   +  V+ +  L++
Sbjct: 264 ERKEWPVKEVNKLRDLALKELKDFNQAKVKTISILVE 300


>gb|AFK47692.1| unknown [Medicago truncatula]
          Length = 297

 Score =  221 bits (563), Expect = 3e-55
 Identities = 122/280 (43%), Positives = 176/280 (62%), Gaps = 1/280 (0%)
 Frame = +2

Query: 128 KPMKVSMSQNQTSWAATINSEVEAHIKQALIGRNPASVYHPMNHLIFEIPRSMAPALCIA 307
           K   +  S  QT + A++++++EAH+KQ +  + P  V+ PM+HLIF  P++  PALC+A
Sbjct: 33  KSTTLRTSMTQTPYWASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLA 92

Query: 308 ACESVGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPKTKPMPHHVYGANIELLTADSM 487
            CE VGG++ QAI+AASAL LM  +TYTHE+L L+D+P  +PM +HVYG N+ELLT D +
Sbjct: 93  TCEFVGGQRHQAISAASALLLMEAATYTHEHLPLTDRP--RPMINHVYGPNMELLTGDGI 150

Query: 488 VPFAYELLAAMDDPTNTNSDRILSVMIEIGRAVGS-QGMVNGQYLKVRCLGLDGDEPCET 664
           VPF +ELLA  D     NS+RIL VM+EI RAVGS  G+++ QY K+   G DG+E C  
Sbjct: 151 VPFGFELLARSDG--GENSERILKVMVEISRAVGSGGGVIDAQYGKILYSGSDGEEKCHV 208

Query: 665 EMVDQVFEKKGGALYSXXXXXXXXXXXXTDEEIEKLRRYGLYVGMMHGIMVYDAAIKEKR 844
           E +  V EK  G L+S             +EEIE+LR++G YVG++ G++ +      K 
Sbjct: 209 EEIRHVVEKYEGRLHSCGAVCGGVLGGGCEEEIERLRKFGYYVGIIQGMIKWGFKEDHKE 268

Query: 845 LVKLADDLKYLALRELEGMKEKNVEPLWSLIDGISVFLRV 964
           +V    + + LA++EL+  K+K V       D I  FL +
Sbjct: 269 VV----EARNLAIQELKFFKDKEV-------DAIKTFLNI 297