BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012747
         (1634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like...   488   e-135
gb|ABK94828.1| unknown [Populus trichocarpa]                          474   e-131
ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|2...   473   e-131
ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycin...   469   e-129
ref|XP_002520741.1| Nucleolar GTP-binding protein, putative [Ric...   465   e-128

>ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like [Vitis vinifera]
            gi|296086696|emb|CBI32331.3| unnamed protein product
            [Vitis vinifera]
          Length = 367

 Score =  488 bits (1255), Expect = e-135
 Identities = 241/340 (70%), Positives = 278/340 (81%), Gaps = 8/340 (2%)
 Frame = +2

Query: 140  SPKALPQTPSRQKQRFPKIVAGKSPG------LSSKQTTLTTHED--WLDLDAEFYRWTK 295
            S  AL  TP        +IV GKS G      +SS +T     E+  W +LDA+ Y WTK
Sbjct: 27   STTALAATPHLASSSTIQIVGGKSHGQYVNGGVSSNRTFEDISEESYWTNLDADLYHWTK 86

Query: 296  SLRPVQWYPGHIAKTXXXXXXXXXXMDVVIDVRDARIPLATSHPEMDSWIGNKKRMLVLN 475
             LRP+QWYPGHIAKT          MDVVI+V+DARIPL+TSHP+M+SW+GN+KR+LVLN
Sbjct: 87   KLRPIQWYPGHIAKTEKELKEQLKLMDVVIEVQDARIPLSTSHPQMESWLGNRKRILVLN 146

Query: 476  REDMISTAERNAWATYFAKQGTKVVFSNGQLGMGALKLGRLAKSLAVGINAKRRAKGLLP 655
            REDMIST +RNAWATY+A QG KVVFSNGQLGMG++KL RLAK+LA G+N KRRAKGLLP
Sbjct: 147  REDMISTEDRNAWATYYAMQGIKVVFSNGQLGMGSMKLSRLAKTLASGVNVKRRAKGLLP 206

Query: 656  RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWIRFGKDLELLDSPGILPM 835
            R VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR LKW++FGKDLELLDSPGI+PM
Sbjct: 207  RPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRQLKWVQFGKDLELLDSPGIIPM 266

Query: 836  RISDQGAAMKLAICDDIGERSYDVADVAAILVQMLTKLPTVGSKALYNRYKIHVEDHCGK 1015
            RISDQ AA+KLAICDDIGERSYDVADVAAILVQMLT++P VG KALYNRYKI  +  CG 
Sbjct: 267  RISDQSAAIKLAICDDIGERSYDVADVAAILVQMLTRIPAVGPKALYNRYKIDTDGLCGN 326

Query: 1016 TFLEKLSMELFNGDVNQAAFRVLTDFRKGRFGWVGLETPP 1135
             F++KL+++LFNGD +QAAFR+LTDFRKG+FGW+ LE PP
Sbjct: 327  IFVQKLALQLFNGDTHQAAFRILTDFRKGKFGWIALERPP 366


>gb|ABK94828.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  474 bits (1219), Expect = e-131
 Identities = 224/295 (75%), Positives = 254/295 (86%)
 Frame = +2

Query: 254  DWLDLDAEFYRWTKSLRPVQWYPGHIAKTXXXXXXXXXXMDVVIDVRDARIPLATSHPEM 433
            DW D + + Y WTK LRPVQWYPGHIAKT          MDVVI+VRDARIPL+T+HP+M
Sbjct: 73   DWYDFETDLYHWTKPLRPVQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPLSTTHPQM 132

Query: 434  DSWIGNKKRMLVLNREDMISTAERNAWATYFAKQGTKVVFSNGQLGMGALKLGRLAKSLA 613
            D+W+GN+KR+LVLNREDMIS A+RNAWATYFA+QG KVV SNGQLGMG +KL R AKSLA
Sbjct: 133  DAWLGNRKRILVLNREDMISKADRNAWATYFARQGIKVVLSNGQLGMGTMKLSRFAKSLA 192

Query: 614  VGINAKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWIRFG 793
              +N KRR KGLLPR VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR L+W+RFG
Sbjct: 193  ASVNVKRREKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFG 252

Query: 794  KDLELLDSPGILPMRISDQGAAMKLAICDDIGERSYDVADVAAILVQMLTKLPTVGSKAL 973
             DLELLDSPGI+PMRISDQ AA+KLAICDDIGERSYDV DVAAILVQ+LTKLPTVG+KAL
Sbjct: 253  NDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVTDVAAILVQILTKLPTVGAKAL 312

Query: 974  YNRYKIHVEDHCGKTFLEKLSMELFNGDVNQAAFRVLTDFRKGRFGWVGLETPPK 1138
             NRYK+  +D CGK F++KLS+ LFNGD +QAAFR+L+DFRKG+FGW  LE PP+
Sbjct: 313  NNRYKMDADDFCGKIFVQKLSVHLFNGDTHQAAFRILSDFRKGKFGWAALERPPR 367


>ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|222857032|gb|EEE94579.1|
            predicted protein [Populus trichocarpa]
          Length = 387

 Score =  473 bits (1217), Expect = e-131
 Identities = 224/294 (76%), Positives = 253/294 (86%)
 Frame = +2

Query: 254  DWLDLDAEFYRWTKSLRPVQWYPGHIAKTXXXXXXXXXXMDVVIDVRDARIPLATSHPEM 433
            DW D + + Y WTK LRPVQWYPGHIAKT          MDVVI+VRDARIPL+T+HP+M
Sbjct: 73   DWYDFETDLYHWTKPLRPVQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPLSTTHPQM 132

Query: 434  DSWIGNKKRMLVLNREDMISTAERNAWATYFAKQGTKVVFSNGQLGMGALKLGRLAKSLA 613
            D+W+GN+KR+LVLNREDMIS A+RNAWATYFA+QG KVV SNGQLGMG +KL R AKSLA
Sbjct: 133  DAWLGNRKRILVLNREDMISKADRNAWATYFARQGIKVVLSNGQLGMGTMKLSRFAKSLA 192

Query: 614  VGINAKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWIRFG 793
              +N KRR KGLLPR VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR L+W+RFG
Sbjct: 193  ASVNVKRREKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFG 252

Query: 794  KDLELLDSPGILPMRISDQGAAMKLAICDDIGERSYDVADVAAILVQMLTKLPTVGSKAL 973
             DLELLDSPGI+PMRISDQ AA+KLAICDDIGERSYDV DVAAILVQ+LTKLPTVG+KAL
Sbjct: 253  NDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVTDVAAILVQILTKLPTVGAKAL 312

Query: 974  YNRYKIHVEDHCGKTFLEKLSMELFNGDVNQAAFRVLTDFRKGRFGWVGLETPP 1135
             NRYK+  +D CGK F++KLS+ LFNGD +QAAFR+L+DFRKG+FGW  LE PP
Sbjct: 313  NNRYKMDADDFCGKIFVQKLSVHLFNGDTHQAAFRILSDFRKGKFGWAALERPP 366


>ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycine max]
            gi|255634965|gb|ACU17841.1| unknown [Glycine max]
          Length = 391

 Score =  469 bits (1206), Expect = e-129
 Identities = 225/296 (76%), Positives = 254/296 (85%)
 Frame = +2

Query: 251  EDWLDLDAEFYRWTKSLRPVQWYPGHIAKTXXXXXXXXXXMDVVIDVRDARIPLATSHPE 430
            + W +LD + Y WTK+LRPVQW+PGHIAK           MDVVI+VRD RIP++TSHP+
Sbjct: 71   DHWSELDTDLYHWTKALRPVQWFPGHIAKAEKELKEQLKLMDVVIEVRDGRIPMSTSHPQ 130

Query: 431  MDSWIGNKKRMLVLNREDMISTAERNAWATYFAKQGTKVVFSNGQLGMGALKLGRLAKSL 610
            MD W+GN+KR+LVLNREDMISTA+RNAWA YF + GTKVVFSNGQLGMG +KLGRLAK L
Sbjct: 131  MDPWLGNRKRILVLNREDMISTADRNAWADYFTRNGTKVVFSNGQLGMGTMKLGRLAKEL 190

Query: 611  AVGINAKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWIRF 790
            A  +N KRR+KGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR L+W+RF
Sbjct: 191  AADVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRF 250

Query: 791  GKDLELLDSPGILPMRISDQGAAMKLAICDDIGERSYDVADVAAILVQMLTKLPTVGSKA 970
            GKDLELLDSPGILPMRISDQ AA+KLAICDDIGERSYDVADVAAILVQML+KLPTVG  A
Sbjct: 251  GKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVAAILVQMLSKLPTVGRDA 310

Query: 971  LYNRYKIHVEDHCGKTFLEKLSMELFNGDVNQAAFRVLTDFRKGRFGWVGLETPPK 1138
            L  RYKI V+   G+ F+EKL++ +FNGDV+QAAFRVL DFRKG+FGW  LE PPK
Sbjct: 311  LCKRYKIDVDCRDGRIFIEKLAVRVFNGDVHQAAFRVLADFRKGKFGWTALERPPK 366


>ref|XP_002520741.1| Nucleolar GTP-binding protein, putative [Ricinus communis]
            gi|223540126|gb|EEF41703.1| Nucleolar GTP-binding
            protein, putative [Ricinus communis]
          Length = 366

 Score =  465 bits (1197), Expect = e-128
 Identities = 226/329 (68%), Positives = 268/329 (81%)
 Frame = +2

Query: 152  LPQTPSRQKQRFPKIVAGKSPGLSSKQTTLTTHEDWLDLDAEFYRWTKSLRPVQWYPGHI 331
            LP+T S  +      + GK+P L    T   T  DW+ L+ + Y WTK LRPVQWYPGHI
Sbjct: 19   LPETRSSNRVHSVVNIGGKTPTLYGNATLDET--DWVGLETDLYYWTKPLRPVQWYPGHI 76

Query: 332  AKTXXXXXXXXXXMDVVIDVRDARIPLATSHPEMDSWIGNKKRMLVLNREDMISTAERNA 511
            AKT          MDVVI+VRDARIPL+T+HP+MDSW+GN+KR+LVLNREDMIS A+RNA
Sbjct: 77   AKTEKELKEQLKLMDVVIEVRDARIPLSTTHPQMDSWLGNRKRILVLNREDMISKADRNA 136

Query: 512  WATYFAKQGTKVVFSNGQLGMGALKLGRLAKSLAVGINAKRRAKGLLPRAVRAGIVGYPN 691
            WA YFA QG K VF+NGQ GMG +KL RLAK+LA  +N KRRAKGLLPR VRAG+VGYPN
Sbjct: 137  WANYFATQGIKAVFANGQFGMGTVKLSRLAKALAASVNVKRRAKGLLPRPVRAGVVGYPN 196

Query: 692  VGKSSLINRLLKRRMCPAAPRPGVTRVLKWIRFGKDLELLDSPGILPMRISDQGAAMKLA 871
            VGKSSLINRLLKRRMC AA RPGVTR LKW+RFG +LELLDSPG+LPMRI+DQ AA+KLA
Sbjct: 197  VGKSSLINRLLKRRMCEAASRPGVTRELKWVRFGNELELLDSPGMLPMRINDQSAAIKLA 256

Query: 872  ICDDIGERSYDVADVAAILVQMLTKLPTVGSKALYNRYKIHVEDHCGKTFLEKLSMELFN 1051
            ICDDIGERSYDVADVAAILVQMLT++P+VG +AL+ RYKI V+ + G+ F++KL+++LFN
Sbjct: 257  ICDDIGERSYDVADVAAILVQMLTRIPSVGLEALHRRYKIDVDGYNGRIFIQKLAIQLFN 316

Query: 1052 GDVNQAAFRVLTDFRKGRFGWVGLETPPK 1138
            GD +QAAFR+LTDFRKG+FGWV LE PP+
Sbjct: 317  GDTHQAAFRILTDFRKGKFGWVALERPPR 345