BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012740
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875020.1| hypothetical protein ARALYDRAFT_490504 [Arab...    72   6e-11
gb|AAC13628.1| similar to ATP-dependent RNA helicases [Arabidops...    70   2e-10
dbj|BAH19526.1| AT4G00660 [Arabidopsis thaliana]                       70   2e-10
ref|NP_191975.2| DEAD-box ATP-dependent RNA helicase 8 [Arabidop...    70   2e-10
emb|CAA09199.1| RNA helicase [Arabidopsis thaliana]                    70   2e-10

>ref|XP_002875020.1| hypothetical protein ARALYDRAFT_490504 [Arabidopsis lyrata subsp.
           lyrata] gi|297320857|gb|EFH51279.1| hypothetical protein
           ARALYDRAFT_490504 [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/64 (62%), Positives = 45/64 (70%), Gaps = 7/64 (10%)
 Frame = +3

Query: 3   KIQVMVTIGRTSLKDVVMRL*Q-------LASRILDLAKKGVCVLKDCSILVMDEMTNFN 161
           KIQVMVT G TSLKD +MRL Q          RILDLAKKGVCVLKDCS+LVMDE     
Sbjct: 229 KIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSVLVMDEADKLL 288

Query: 162 TQKY 173
           +Q++
Sbjct: 289 SQEF 292


>gb|AAC13628.1| similar to ATP-dependent RNA helicases [Arabidopsis thaliana]
           gi|7267405|emb|CAB80875.1| putative RNA helicase
           [Arabidopsis thaliana]
          Length = 499

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/64 (60%), Positives = 44/64 (68%), Gaps = 7/64 (10%)
 Frame = +3

Query: 3   KIQVMVTIGRTSLKDVVMRL*Q-------LASRILDLAKKGVCVLKDCSILVMDEMTNFN 161
           KIQVMVT G TSLKD +MRL Q          RILDL KKGVCVLKDCS+LVMDE     
Sbjct: 221 KIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLL 280

Query: 162 TQKY 173
           +Q++
Sbjct: 281 SQEF 284


>dbj|BAH19526.1| AT4G00660 [Arabidopsis thaliana]
          Length = 374

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/64 (60%), Positives = 44/64 (68%), Gaps = 7/64 (10%)
 Frame = +3

Query: 3   KIQVMVTIGRTSLKDVVMRL*Q-------LASRILDLAKKGVCVLKDCSILVMDEMTNFN 161
           KIQVMVT G TSLKD +MRL Q          RILDL KKGVCVLKDCS+LVMDE     
Sbjct: 96  KIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLL 155

Query: 162 TQKY 173
           +Q++
Sbjct: 156 SQEF 159


>ref|NP_191975.2| DEAD-box ATP-dependent RNA helicase 8 [Arabidopsis thaliana]
           gi|30678703|ref|NP_849535.1| DEAD-box ATP-dependent RNA
           helicase 8 [Arabidopsis thaliana]
           gi|75330763|sp|Q8RXK6.1|RH8_ARATH RecName: Full=DEAD-box
           ATP-dependent RNA helicase 8 gi|19423939|gb|AAL87312.1|
           putative RNA helicase [Arabidopsis thaliana]
           gi|21280839|gb|AAM45033.1| putative RNA helicase
           [Arabidopsis thaliana] gi|332656515|gb|AEE81915.1|
           DEAD-box ATP-dependent RNA helicase 8 [Arabidopsis
           thaliana] gi|332656516|gb|AEE81916.1| DEAD-box
           ATP-dependent RNA helicase 8 [Arabidopsis thaliana]
          Length = 505

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/64 (60%), Positives = 44/64 (68%), Gaps = 7/64 (10%)
 Frame = +3

Query: 3   KIQVMVTIGRTSLKDVVMRL*Q-------LASRILDLAKKGVCVLKDCSILVMDEMTNFN 161
           KIQVMVT G TSLKD +MRL Q          RILDL KKGVCVLKDCS+LVMDE     
Sbjct: 227 KIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLL 286

Query: 162 TQKY 173
           +Q++
Sbjct: 287 SQEF 290


>emb|CAA09199.1| RNA helicase [Arabidopsis thaliana]
          Length = 505

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/64 (60%), Positives = 44/64 (68%), Gaps = 7/64 (10%)
 Frame = +3

Query: 3   KIQVMVTIGRTSLKDVVMRL*Q-------LASRILDLAKKGVCVLKDCSILVMDEMTNFN 161
           KIQVMVT G TSLKD +MRL Q          RILDL KKGVCVLKDCS+LVMDE     
Sbjct: 227 KIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLL 286

Query: 162 TQKY 173
           +Q++
Sbjct: 287 SQEF 290