BLASTX nr result

ID: Coptis21_contig00012739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012739
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285380.2| PREDICTED: HAUS augmin-like complex subunit ...   433   e-119
ref|XP_002308008.1| predicted protein [Populus trichocarpa] gi|2...   430   e-118
ref|XP_002529167.1| Coiled-coil domain-containing protein, putat...   423   e-116
ref|XP_002264816.2| PREDICTED: HAUS augmin-like complex subunit ...   409   e-112
ref|XP_004136688.1| PREDICTED: HAUS augmin-like complex subunit ...   397   e-108

>ref|XP_002285380.2| PREDICTED: HAUS augmin-like complex subunit 1-like [Vitis vinifera]
           gi|147795301|emb|CAN69456.1| hypothetical protein
           VITISV_036572 [Vitis vinifera]
           gi|296083695|emb|CBI23684.3| unnamed protein product
           [Vitis vinifera]
          Length = 298

 Score =  433 bits (1113), Expect = e-119
 Identities = 218/270 (80%), Positives = 240/270 (88%)
 Frame = +1

Query: 1   TAHIAQVKTWLASQFEAVGKDVPDFEYTPRSIAHLHALATVSQAKTQAAGIVAADLRQKA 180
           +  I+ VK WLASQF+A GKDVPDFEYTPR+IAHLH L+T+SQAKTQAAGIVA D RQKA
Sbjct: 21  SGRISDVKAWLASQFDAAGKDVPDFEYTPRTIAHLHNLSTLSQAKTQAAGIVATDFRQKA 80

Query: 181 VEYRSQASRVREILENVGLAQESLPQNAVASVQVLANVANLLNIRDTELSSYLVAMGDIS 360
            EYR QA+RVREILENVGLAQE LP N VAS Q LANVANLLN RDTELSS+LVAMGD+S
Sbjct: 81  AEYRCQAARVREILENVGLAQEGLPSNVVASAQCLANVANLLNTRDTELSSFLVAMGDMS 140

Query: 361 LRKTGVEEKRTKVQKECKVLLDYTRKAIARLTYLKRTLSQLEDDATNCEAQMVHWKTNLA 540
           LRKTGVEEKR KVQKE K+LLDYTRKAIARLTYLKRTL+QLEDD   CEAQM +WKTNLA
Sbjct: 141 LRKTGVEEKRAKVQKESKILLDYTRKAIARLTYLKRTLAQLEDDVAPCEAQMENWKTNLA 200

Query: 541 IMLSKERQYLQQYSNYKAILNRVSYTSDISHGVLVEMAEHRKELDKKTKPILDSLRSYQD 720
           IM+SKERQYLQQYSNYKA+LNRV YT +ISHGVLVEMAEHRK+L+KKTKPILD+LRSYQD
Sbjct: 201 IMVSKERQYLQQYSNYKALLNRVGYTPEISHGVLVEMAEHRKDLEKKTKPILDTLRSYQD 260

Query: 721 LPPDKXXXXXXIEDKRRQYAAAEKYLEEVI 810
           LPPDK      IEDK+RQYAAAEK+LE+V+
Sbjct: 261 LPPDKALAALAIEDKKRQYAAAEKHLEDVL 290


>ref|XP_002308008.1| predicted protein [Populus trichocarpa] gi|222853984|gb|EEE91531.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  430 bits (1105), Expect = e-118
 Identities = 215/267 (80%), Positives = 239/267 (89%)
 Frame = +1

Query: 10  IAQVKTWLASQFEAVGKDVPDFEYTPRSIAHLHALATVSQAKTQAAGIVAADLRQKAVEY 189
           IA+VK WL SQF+A GKDVP+FEYTPRSIAHL+ LA  SQAKTQAA IVA D RQKAVEY
Sbjct: 16  IAEVKAWLTSQFDAAGKDVPEFEYTPRSIAHLYNLAAASQAKTQAANIVANDFRQKAVEY 75

Query: 190 RSQASRVREILENVGLAQESLPQNAVASVQVLANVANLLNIRDTELSSYLVAMGDISLRK 369
           R+QA+R+REILENVGLAQESLP N V+S QVLANVAN LNIRDTELSS+LVAMGD+SLRK
Sbjct: 76  RAQAARIREILENVGLAQESLPSNVVSSAQVLANVANFLNIRDTELSSFLVAMGDLSLRK 135

Query: 370 TGVEEKRTKVQKECKVLLDYTRKAIARLTYLKRTLSQLEDDATNCEAQMVHWKTNLAIML 549
           TGVEEKR KVQKE K+LLDYTRKAIARLTYLKRTL+QLEDD   CEAQM +WKTNLA+M 
Sbjct: 136 TGVEEKRAKVQKESKILLDYTRKAIARLTYLKRTLAQLEDDVPPCEAQMENWKTNLAVMA 195

Query: 550 SKERQYLQQYSNYKAILNRVSYTSDISHGVLVEMAEHRKELDKKTKPILDSLRSYQDLPP 729
           SKERQYLQQYSNYKA+LNRV YT DISHG+LVEMAEHR++L+KKTKPI+D+LRSYQDLPP
Sbjct: 196 SKERQYLQQYSNYKALLNRVGYTQDISHGMLVEMAEHRQDLEKKTKPIMDTLRSYQDLPP 255

Query: 730 DKXXXXXXIEDKRRQYAAAEKYLEEVI 810
           DK      IEDK+RQYAAAEKYLE+V+
Sbjct: 256 DKALATLAIEDKKRQYAAAEKYLEDVL 282


>ref|XP_002529167.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
           gi|223531391|gb|EEF33226.1| Coiled-coil
           domain-containing protein, putative [Ricinus communis]
          Length = 304

 Score =  423 bits (1087), Expect = e-116
 Identities = 211/269 (78%), Positives = 238/269 (88%)
 Frame = +1

Query: 4   AHIAQVKTWLASQFEAVGKDVPDFEYTPRSIAHLHALATVSQAKTQAAGIVAADLRQKAV 183
           + I++VK WL SQFEA GKDVP+FEYT RSI+HL+ LAT+SQ+KT AA I+A D RQKA 
Sbjct: 28  SRISEVKAWLTSQFEAAGKDVPEFEYTQRSISHLYNLATLSQSKTNAANILANDFRQKAT 87

Query: 184 EYRSQASRVREILENVGLAQESLPQNAVASVQVLANVANLLNIRDTELSSYLVAMGDISL 363
           EYR+QA+R+REILENVGLAQESLP N V S QVLANVANLLNIRDTELSS+LVAMGDISL
Sbjct: 88  EYRAQAARIREILENVGLAQESLPSNVVGSAQVLANVANLLNIRDTELSSFLVAMGDISL 147

Query: 364 RKTGVEEKRTKVQKECKVLLDYTRKAIARLTYLKRTLSQLEDDATNCEAQMVHWKTNLAI 543
           RKTGVEEKR K QK+ K+LLDYTRKAIARLTYLKRTL+QLEDD   CEAQM +WKTNLA+
Sbjct: 148 RKTGVEEKRAKAQKDSKILLDYTRKAIARLTYLKRTLAQLEDDVAPCEAQMENWKTNLAV 207

Query: 544 MLSKERQYLQQYSNYKAILNRVSYTSDISHGVLVEMAEHRKELDKKTKPILDSLRSYQDL 723
           M SKERQYLQQYSNYKA+LNRV YT +ISHGVLVEM+EHRKEL+KKTKPI+D+LRSYQDL
Sbjct: 208 MASKERQYLQQYSNYKALLNRVGYTPEISHGVLVEMSEHRKELEKKTKPIMDTLRSYQDL 267

Query: 724 PPDKXXXXXXIEDKRRQYAAAEKYLEEVI 810
           PPDK      IEDK+RQYAAAEKYLE+V+
Sbjct: 268 PPDKALAALAIEDKKRQYAAAEKYLEDVL 296


>ref|XP_002264816.2| PREDICTED: HAUS augmin-like complex subunit 1-like [Vitis vinifera]
           gi|296084427|emb|CBI24986.3| unnamed protein product
           [Vitis vinifera]
          Length = 298

 Score =  409 bits (1052), Expect = e-112
 Identities = 207/270 (76%), Positives = 230/270 (85%)
 Frame = +1

Query: 1   TAHIAQVKTWLASQFEAVGKDVPDFEYTPRSIAHLHALATVSQAKTQAAGIVAADLRQKA 180
           +  I+ VK WLASQ++A GKDVPDFEYTPR+I  LH L+T+SQAKTQAAGI+A D RQKA
Sbjct: 21  SGRISDVKAWLASQYDAAGKDVPDFEYTPRTIGRLHNLSTLSQAKTQAAGILATDFRQKA 80

Query: 181 VEYRSQASRVREILENVGLAQESLPQNAVASVQVLANVANLLNIRDTELSSYLVAMGDIS 360
            EYR QA+RVREILENVGL QE LP N VAS Q LANVANLLN RDTELSS+LVAMGD+S
Sbjct: 81  AEYRCQAARVREILENVGLPQEGLPSNVVASAQCLANVANLLNTRDTELSSFLVAMGDMS 140

Query: 361 LRKTGVEEKRTKVQKECKVLLDYTRKAIARLTYLKRTLSQLEDDATNCEAQMVHWKTNLA 540
           LRK+ VEEKR KVQKE K+LLDYTRKAIAR+TYLKR L QLEDD   CEAQM +WKTNLA
Sbjct: 141 LRKSEVEEKRAKVQKESKILLDYTRKAIARMTYLKRILGQLEDDVAPCEAQMENWKTNLA 200

Query: 541 IMLSKERQYLQQYSNYKAILNRVSYTSDISHGVLVEMAEHRKELDKKTKPILDSLRSYQD 720
           IM SKERQYLQQY NYKA+LNRV YT +ISHGVLVEMAEHRK+L+KKTKPILD+LRSYQD
Sbjct: 201 IMASKERQYLQQYRNYKALLNRVGYTPEISHGVLVEMAEHRKDLEKKTKPILDTLRSYQD 260

Query: 721 LPPDKXXXXXXIEDKRRQYAAAEKYLEEVI 810
           LPPDK      IEDK+ QYAAAEK LE+V+
Sbjct: 261 LPPDKALAALAIEDKKMQYAAAEKRLEDVL 290


>ref|XP_004136688.1| PREDICTED: HAUS augmin-like complex subunit 1-like [Cucumis
           sativus]
          Length = 297

 Score =  397 bits (1021), Expect = e-108
 Identities = 198/270 (73%), Positives = 233/270 (86%)
 Frame = +1

Query: 1   TAHIAQVKTWLASQFEAVGKDVPDFEYTPRSIAHLHALATVSQAKTQAAGIVAADLRQKA 180
           T+ IA+VK WL S+F   GK+VPDFEYTP S++HLH L  +SQAKT+AA I+A D R KA
Sbjct: 20  TSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNLSQAKTRAAEILAKDFRLKA 79

Query: 181 VEYRSQASRVREILENVGLAQESLPQNAVASVQVLANVANLLNIRDTELSSYLVAMGDIS 360
            EYR+QA+R+REILE+VG+AQE+L  N V+S QVLANVANLLNIRDTELSS+LVAMGDIS
Sbjct: 80  AEYRAQAARIREILESVGMAQENLSSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDIS 139

Query: 361 LRKTGVEEKRTKVQKECKVLLDYTRKAIARLTYLKRTLSQLEDDATNCEAQMVHWKTNLA 540
           LRK  VEEKR KV+K+ KVLLD+TRKAIARLTYLKRTL+QLEDD   CEAQM +WKTNLA
Sbjct: 140 LRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQLEDDVAPCEAQMDNWKTNLA 199

Query: 541 IMLSKERQYLQQYSNYKAILNRVSYTSDISHGVLVEMAEHRKELDKKTKPILDSLRSYQD 720
           +M +KERQY+QQ +NYKA+LNRV Y+ DISHG+LVEMAEHRKEL+KKTKP+LD+LRSYQD
Sbjct: 200 VMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHRKELEKKTKPMLDTLRSYQD 259

Query: 721 LPPDKXXXXXXIEDKRRQYAAAEKYLEEVI 810
           LPPDK      IEDK+RQYAAAEKYLE+V+
Sbjct: 260 LPPDKALAALAIEDKKRQYAAAEKYLEDVL 289


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