BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012735
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529953.1| DNA repair protein reca, putative [Ricinus c...   471   e-130
ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [S...   464   e-128
ref|XP_002332188.1| predicted protein [Populus trichocarpa] gi|2...   464   e-128
ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1...   463   e-128
gb|EEC75811.1| hypothetical protein OsI_12760 [Oryza sativa Indi...   463   e-128

>ref|XP_002529953.1| DNA repair protein reca, putative [Ricinus communis]
           gi|223530551|gb|EEF32430.1| DNA repair protein reca,
           putative [Ricinus communis]
          Length = 343

 Score =  471 bits (1211), Expect = e-130
 Identities = 238/289 (82%), Positives = 255/289 (88%), Gaps = 1/289 (0%)
 Frame = +3

Query: 3   RIVEVYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKDLGVDIENLIVCQP 182
           RIVE+YGPESSGKTTLALHAIAE+Q+LGGNAMLVDAEHAFDPAYSK LGVD+ENLIVCQP
Sbjct: 46  RIVEIYGPESSGKTTLALHAIAEIQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQP 105

Query: 183 DNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 362
           DNGEMALE ADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS
Sbjct: 106 DNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 165

Query: 363 GNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 542
           GNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRS GKIKS KGDED
Sbjct: 166 GNASKAGCTLVFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSNGKIKSAKGDED 225

Query: 543 IGLXXXXXXXXXXXXXPYKQAEFDIVFGQGVSQLGCILDCAETMDLIVKKGSWYSYEEHR 722
           +GL             PYKQAEF+I+FG+GVS+LGC+LDCAE MD++VKKGSWYSY EHR
Sbjct: 226 VGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSRLGCVLDCAEMMDVVVKKGSWYSYGEHR 285

Query: 723 LGQGRDKALQYLRENPLLCSEIEKVVRSKIADAT-KQASLTQSRPSLPL 866
           LGQGRD+ALQYLR+NP L  EIEK VRS +AD T   ASL      LPL
Sbjct: 286 LGQGRDRALQYLRDNPHLHEEIEKKVRSMMADGTVNTASLYSRNSPLPL 334


>ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [Sorghum bicolor]
           gi|241920620|gb|EER93764.1| hypothetical protein
           SORBIDRAFT_01g013810 [Sorghum bicolor]
          Length = 415

 Score =  464 bits (1194), Expect = e-128
 Identities = 229/279 (82%), Positives = 251/279 (89%)
 Frame = +3

Query: 3   RIVEVYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKDLGVDIENLIVCQP 182
           R+VEVYGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDPAYSK LGVDIENLIVCQP
Sbjct: 119 RVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQP 178

Query: 183 DNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 362
           DNGEMALE ADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS
Sbjct: 179 DNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 238

Query: 363 GNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 542
           GNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIR  GKIKS KGDED
Sbjct: 239 GNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIKSPKGDED 298

Query: 543 IGLXXXXXXXXXXXXXPYKQAEFDIVFGQGVSQLGCILDCAETMDLIVKKGSWYSYEEHR 722
           +G+             PYKQAEF+I+FG+GVS+LGC+LDCAE MD++ KKGSWYSY++ R
Sbjct: 299 VGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMDVVAKKGSWYSYKDIR 358

Query: 723 LGQGRDKALQYLRENPLLCSEIEKVVRSKIADATKQASL 839
           LGQGR+KALQYLRE+P +C EIEKVVR+ I + ++  SL
Sbjct: 359 LGQGREKALQYLRESPTICDEIEKVVRAMIPEGSRHMSL 397


>ref|XP_002332188.1| predicted protein [Populus trichocarpa] gi|222875295|gb|EEF12426.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  464 bits (1193), Expect = e-128
 Identities = 231/274 (84%), Positives = 249/274 (90%)
 Frame = +3

Query: 3   RIVEVYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKDLGVDIENLIVCQP 182
           RIVE++GPESSGKTTLALHAIAEVQ+ GG+AMLVDAEHAFDPAYSK LGVD+ENLIVCQP
Sbjct: 108 RIVEIFGPESSGKTTLALHAIAEVQKFGGHAMLVDAEHAFDPAYSKALGVDVENLIVCQP 167

Query: 183 DNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 362
           DNGEMALE ADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMS
Sbjct: 168 DNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 227

Query: 363 GNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 542
           GNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED
Sbjct: 228 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 287

Query: 543 IGLXXXXXXXXXXXXXPYKQAEFDIVFGQGVSQLGCILDCAETMDLIVKKGSWYSYEEHR 722
           +G+             PYKQAEF+I+FG+GVSQLGCILDCAE MD++VKKGSWYSY +HR
Sbjct: 288 VGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSQLGCILDCAEMMDVVVKKGSWYSYGDHR 347

Query: 723 LGQGRDKALQYLRENPLLCSEIEKVVRSKIADAT 824
           LGQGRDKALQYLR+NP L  EIEK VRS + D T
Sbjct: 348 LGQGRDKALQYLRDNPHLQEEIEKKVRSTMTDGT 381


>ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           isoform 1 [Brachypodium distachyon]
          Length = 412

 Score =  463 bits (1191), Expect = e-128
 Identities = 228/279 (81%), Positives = 251/279 (89%)
 Frame = +3

Query: 3   RIVEVYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKDLGVDIENLIVCQP 182
           R+VEVYGPESSGKTTLALHAIAE+Q+LGGNAMLVDAEHAFDPAYSK LGVDIENLIVCQP
Sbjct: 116 RVVEVYGPESSGKTTLALHAIAEIQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQP 175

Query: 183 DNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 362
           DNGEMALE ADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS
Sbjct: 176 DNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 235

Query: 363 GNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 542
           GNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIR  GKIKS KGDED
Sbjct: 236 GNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRHIGKIKSAKGDED 295

Query: 543 IGLXXXXXXXXXXXXXPYKQAEFDIVFGQGVSQLGCILDCAETMDLIVKKGSWYSYEEHR 722
           +G+             PYKQAEF+I+FG+GVS+LGCILDCAE M+++ KKGSWYSY++ R
Sbjct: 296 VGVKVRVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCILDCAELMEVVAKKGSWYSYKDIR 355

Query: 723 LGQGRDKALQYLRENPLLCSEIEKVVRSKIADATKQASL 839
           LGQGR+KALQYLRE+P +C EIEKVVR+ I + T+  +L
Sbjct: 356 LGQGREKALQYLRESPTICDEIEKVVRAMIPEGTRHMTL 394


>gb|EEC75811.1| hypothetical protein OsI_12760 [Oryza sativa Indica Group]
           gi|222625431|gb|EEE59563.1| hypothetical protein
           OsJ_11852 [Oryza sativa Japonica Group]
          Length = 436

 Score =  463 bits (1191), Expect = e-128
 Identities = 228/279 (81%), Positives = 249/279 (89%)
 Frame = +3

Query: 3   RIVEVYGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKDLGVDIENLIVCQP 182
           R+VEVYGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDPAYSK LGVDIENLIVCQP
Sbjct: 141 RVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQP 200

Query: 183 DNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 362
           DNGEMALE ADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS
Sbjct: 201 DNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 260

Query: 363 GNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 542
           GNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIR  GKIKS KGDED
Sbjct: 261 GNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIKSAKGDED 320

Query: 543 IGLXXXXXXXXXXXXXPYKQAEFDIVFGQGVSQLGCILDCAETMDLIVKKGSWYSYEEHR 722
           +G+             PYKQAEF+I+FG+GVS+LGC+LDCAE M+++ KKGSWYSY+E R
Sbjct: 321 VGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKEMR 380

Query: 723 LGQGRDKALQYLRENPLLCSEIEKVVRSKIADATKQASL 839
           LGQGR+KALQYLRE+P +C EIEK VR+ I +  +  SL
Sbjct: 381 LGQGREKALQYLRESPTICDEIEKAVRAMIPEGARHMSL 419