BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012724
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-41
ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containi...   159   3e-37
emb|CBI30210.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containi...   143   1e-32
ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31

>ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|222868119|gb|EEF05250.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score =  171 bits (434), Expect = 4e-41
 Identities = 74/115 (64%), Positives = 97/115 (84%)
 Frame = -3

Query: 345  SMKINYNIQLTSEHYASMVGVLGYWDCYDEAEEMVDNMPFDPDASVWRALLDSCRLRAKT 166
            SMK+ ++++ TSEHYAS+VGVLGYW   +EAEE+++ MPFDP+ SVWRALLD CRL A T
Sbjct: 669  SMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANT 728

Query: 165  KLGKKVVERLVNMEPKDPSTYILVSNLYSASGRWNCFERVREEMREKGLQKHPSR 1
             +GK+V + ++ MEP+DPSTY+LVSNLY+ASGRW+C E VRE MR++GL+KHP R
Sbjct: 729  SIGKRVAKHIIGMEPRDPSTYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCR 783


>ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/115 (62%), Positives = 90/115 (78%)
 Frame = -3

Query: 345 SMKINYNIQLTSEHYASMVGVLGYWDCYDEAEEMVDNMPFDPDASVWRALLDSCRLRAKT 166
           SMK  Y+I  T EHY S+VGVLGYW   +EAEEM++ MP +P+ASVWRALLD+CR+ + T
Sbjct: 636 SMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNT 695

Query: 165 KLGKKVVERLVNMEPKDPSTYILVSNLYSASGRWNCFERVREEMREKGLQKHPSR 1
            +GK+  + L+ M+P DPSTYILVSNLYSA GRW+C + VREEMR KG +KHP R
Sbjct: 696 TIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGR 750


>emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/115 (62%), Positives = 90/115 (78%)
 Frame = -3

Query: 345 SMKINYNIQLTSEHYASMVGVLGYWDCYDEAEEMVDNMPFDPDASVWRALLDSCRLRAKT 166
           SMK  Y+I  T EHY S+VGVLGYW   +EAEEM++ MP +P+ASVWRALLD+CR+ + T
Sbjct: 654 SMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNT 713

Query: 165 KLGKKVVERLVNMEPKDPSTYILVSNLYSASGRWNCFERVREEMREKGLQKHPSR 1
            +GK+  + L+ M+P DPSTYILVSNLYSA GRW+C + VREEMR KG +KHP R
Sbjct: 714 TIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGR 768


>ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/116 (56%), Positives = 84/116 (72%)
 Frame = -3

Query: 348 HSMKINYNIQLTSEHYASMVGVLGYWDCYDEAEEMVDNMPFDPDASVWRALLDSCRLRAK 169
           +SM+  Y I+ TS HYAS + VLG+W    EA E ++NMPF P A VWR LLD CRL   
Sbjct: 627 NSMRTVYQIEPTSRHYASFISVLGHWGLLQEALETINNMPFQPSALVWRVLLDGCRLHKN 686

Query: 168 TKLGKKVVERLVNMEPKDPSTYILVSNLYSASGRWNCFERVREEMREKGLQKHPSR 1
             +GK   + ++ +EPKDPST+ILVSNLYSASGRW+  E VRE+MREKG +KHP++
Sbjct: 687 ELIGKWAAQNILALEPKDPSTFILVSNLYSASGRWDRSEMVREDMREKGFRKHPAQ 742


>ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like
            [Cucumis sativus]
          Length = 908

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/115 (55%), Positives = 83/115 (72%)
 Frame = -3

Query: 345  SMKINYNIQLTSEHYASMVGVLGYWDCYDEAEEMVDNMPFDPDASVWRALLDSCRLRAKT 166
            SM+  +NI+ T EHYAS + VLG W   +EAE+ + NMP +PD  VWRALL+SCR+    
Sbjct: 662  SMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNE 721

Query: 165  KLGKKVVERLVNMEPKDPSTYILVSNLYSASGRWNCFERVREEMREKGLQKHPSR 1
            +L K     ++ +EPKDP +YIL SNLYSASGRW   E+VRE+MREKG +KHPS+
Sbjct: 722  RLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQ 776