BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012719
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001144370.1| uncharacterized protein LOC100277288 [Zea ma...    59   3e-07
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    59   3e-07
gb|AFW90627.1| hypothetical protein [Solanum tuberosum]                59   4e-07
gb|ACN33586.1| unknown [Zea mays] gi|413938189|gb|AFW72740.1| hy...    59   5e-07
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    57   1e-06

>ref|NP_001144370.1| uncharacterized protein LOC100277288 [Zea mays]
           gi|195641072|gb|ACG40004.1| hypothetical protein [Zea
           mays]
          Length = 352

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/55 (52%), Positives = 34/55 (61%)
 Frame = +3

Query: 120 WSELPEELLTEIAKRINSIEDFVRFGVVCHSWRSVTLNKRHYPLILNTPPWLMLP 284
           WS+LP ELLT+IA RIN + D  RF  VC SWRS   +    P     PPWL+LP
Sbjct: 6   WSDLPSELLTDIAGRINELADIARFRSVCSSWRSAARDAAAAP--PPQPPWLLLP 58


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/83 (32%), Positives = 51/83 (61%)
 Frame = +3

Query: 99   DMSMLRNWSELPEELLTEIAKRINSIEDFVRFGVVCHSWRSVTLNKRHYPLILNTPPWLM 278
            + +++ +WS++P++ L  IA++++S+ED+VRFG VC SW S+    +      +  PWLM
Sbjct: 915  NQTVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSI-FEDKECCCPSSKSPWLM 973

Query: 279  LPDEKIGKDRSFCNLFENKYYRL 347
            L +++  + R F +    K Y +
Sbjct: 974  LAEKENSEIRGFYSPLSGKVYEI 996


>gb|AFW90627.1| hypothetical protein [Solanum tuberosum]
          Length = 248

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/72 (41%), Positives = 44/72 (61%)
 Frame = +3

Query: 111 LRNWSELPEELLTEIAKRINSIEDFVRFGVVCHSWRSVTLNKRHYPLILNTPPWLMLPDE 290
           + +WSEL  +LL  I + +N IED++ FG VC SW SV   K ++   L   PWLML +E
Sbjct: 1   MADWSELQLDLLVSIGRCLNLIEDYLNFGRVCKSWHSVA-TKANFNNDLCRAPWLMLAEE 59

Query: 291 KIGKDRSFCNLF 326
           +  + R F +L+
Sbjct: 60  EDNEVRKFFSLY 71


>gb|ACN33586.1| unknown [Zea mays] gi|413938189|gb|AFW72740.1| hypothetical protein
           ZEAMMB73_143172 [Zea mays]
          Length = 352

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/55 (52%), Positives = 34/55 (61%)
 Frame = +3

Query: 120 WSELPEELLTEIAKRINSIEDFVRFGVVCHSWRSVTLNKRHYPLILNTPPWLMLP 284
           WS+LP ELLT+IA RIN + D  RF  VC SWRS   +    P     PPWL+LP
Sbjct: 6   WSDLPSELLTDIAGRINELADIARFRSVCSSWRSAARDAVAAP--PPQPPWLLLP 58


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
 Frame = +3

Query: 111 LRNWSELPEELLTEIAKRINSIEDFVRFGVVCHSWR-SVTLNKRHYPLILNTPPWLMLP- 284
           + +WS+L  ELL  IAK+     D+VRF  VCH+WR SV     H P  L   PWLMLP 
Sbjct: 1   MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQL---PWLMLPQ 57

Query: 285 DEKIGKDRSFCNLFENKYYRL 347
            +     R F +L  NK++ L
Sbjct: 58  SQPHHTHRPFFSLSLNKFHFL 78