BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012715
         (990 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_974907.1| protein histidine triad nucleotide-binding 3 [A...   200   4e-49
ref|XP_002863905.1| histidine triad family protein [Arabidopsis ...   198   1e-48
gb|AFK42045.1| unknown [Medicago truncatula]                          197   4e-48
ref|XP_002303075.1| predicted protein [Populus trichocarpa] gi|2...   194   2e-47
gb|ABK95845.1| unknown [Populus trichocarpa]                          194   2e-47

>ref|NP_974907.1| protein histidine triad nucleotide-binding 3 [Arabidopsis thaliana]
           gi|332008302|gb|AED95685.1| protein histidine triad
           nucleotide-binding 3 [Arabidopsis thaliana]
          Length = 197

 Score =  200 bits (509), Expect = 4e-49
 Identities = 97/182 (53%), Positives = 127/182 (69%), Gaps = 4/182 (2%)
 Frame = +2

Query: 185 RRLSVLCSHLVPVD----KELFSGISTSSCGATDDGQCMKGSEEKDCVFCKIIRGELPSL 352
           RRL++LCSHL P      ++    +S  S G++ DG+    + + DCVFCKIIRGE P L
Sbjct: 4   RRLAILCSHLNPPGPNPTRDPTLRVSDCSSGSSGDGKVESSTLQNDCVFCKIIRGESPCL 63

Query: 353 KVHEDDVCICILDSNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFLSSAIMKATN 532
           K++EDD+C+CILD+NPLSHGHSL+IPK H+ +L+ TPPSVVA+MCSK+P +S+AI+KAT 
Sbjct: 64  KLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCSKVPLISNAIVKATG 123

Query: 533 CDSFXXXXXXXXXXXQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSIRK 712
            DSF           QVIFHTH+HIIPRK+ D LW SE+  R  LKL  E  +L   +R+
Sbjct: 124 SDSFNLLVNNGAAAGQVIFHTHIHIIPRKERDCLWASESLRRHSLKLDKEASQLVSCVRR 183

Query: 713 QL 718
            L
Sbjct: 184 HL 185


>ref|XP_002863905.1| histidine triad family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309740|gb|EFH40164.1| histidine triad family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 198

 Score =  198 bits (504), Expect = 1e-48
 Identities = 97/183 (53%), Positives = 125/183 (68%), Gaps = 5/183 (2%)
 Frame = +2

Query: 185 RRLSVLCSHLVPVDKE-----LFSGISTSSCGATDDGQCMKGSEEKDCVFCKIIRGELPS 349
           RRL++LCSHL P         +      SS  ++ DG+    + + DCVFCKIIRGE P 
Sbjct: 4   RRLAILCSHLNPPGPNPTRDPILRVSDCSSSASSGDGKVESSNLQNDCVFCKIIRGESPC 63

Query: 350 LKVHEDDVCICILDSNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFLSSAIMKAT 529
           LK++EDD+C+CILD+NPLSHGHSL+IPK H+ +L+ TPPSVVA+MCSK+P +S+AI+KAT
Sbjct: 64  LKLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCSKVPLISNAIVKAT 123

Query: 530 NCDSFXXXXXXXXXXXQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSIR 709
             DSF           QVIFHTH+HIIPRK+ D LW SE+  R  LKL  E  +L   +R
Sbjct: 124 GSDSFNLLVNNGAAAGQVIFHTHIHIIPRKERDCLWASESLRRHTLKLDKEASQLVSRVR 183

Query: 710 KQL 718
           +QL
Sbjct: 184 QQL 186


>gb|AFK42045.1| unknown [Medicago truncatula]
          Length = 220

 Score =  197 bits (500), Expect = 4e-48
 Identities = 99/190 (52%), Positives = 130/190 (68%), Gaps = 1/190 (0%)
 Frame = +2

Query: 182 RRRLSVLCSHLVPVDKELFSGISTSSCGATDDGQCMKGSEEKDCVFCKIIRGELPSLKVH 361
           RRR++VL SHL P        +S S C A  D         ++CVFC I+RG+ P+LK++
Sbjct: 25  RRRVTVLSSHLNPTRFTYSDPLSASLCSARSDSD----DNNQNCVFCNIVRGQSPALKLY 80

Query: 362 EDDVCICILDSNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFLSSAIMKATNCDS 541
           EDD+C+CILD+NPLSHGHSL+IPK H+ SL  TPPSVVA+M SK+PF+S+AIMKAT C+S
Sbjct: 81  EDDMCLCILDTNPLSHGHSLIIPKSHYPSLDATPPSVVAAMSSKVPFISNAIMKATGCNS 140

Query: 542 FXXXXXXXXXXXQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGE-TDELAGSIRKQL 718
           F           QVIFHTH+HIIPRK +D LW SE+  R+PL L  E   +LA SI++QL
Sbjct: 141 FNVLINNGAAAGQVIFHTHMHIIPRKAYDCLWASESLLRRPLNLDDEKVSQLAASIQEQL 200

Query: 719 SMNTSHEDIK 748
            ++   ++ K
Sbjct: 201 LVSDICQESK 210


>ref|XP_002303075.1| predicted protein [Populus trichocarpa] gi|222844801|gb|EEE82348.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  194 bits (494), Expect = 2e-47
 Identities = 94/185 (50%), Positives = 126/185 (68%), Gaps = 2/185 (1%)
 Frame = +2

Query: 173 MDARRRLSVLCSHLVPVDKELFSGISTS--SCGATDDGQCMKGSEEKDCVFCKIIRGELP 346
           M++R RLS++CSHL+P      S +S+S  S  + +D      + + DCVFC+I+RGE P
Sbjct: 1   MESRSRLSIICSHLLPGSPSPTSRLSSSITSSASINDAAGDTRNHQLDCVFCRIVRGESP 60

Query: 347 SLKVHEDDVCICILDSNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFLSSAIMKA 526
           + K++ED+ C+CILDS+PLS GHSL+IPK HFS L+ TPPSVVA+MCSK+P + +AIMKA
Sbjct: 61  AFKLYEDETCLCILDSSPLSPGHSLIIPKSHFSCLEATPPSVVAAMCSKVPSIGNAIMKA 120

Query: 527 TNCDSFXXXXXXXXXXXQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSI 706
              DSF           QVIFHTH+HIIPRK  D LW +E+  R+PL    E  +L   +
Sbjct: 121 NGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTTESLRRRPLNFDQEASQLVNRV 180

Query: 707 RKQLS 721
           R+QLS
Sbjct: 181 REQLS 185


>gb|ABK95845.1| unknown [Populus trichocarpa]
          Length = 197

 Score =  194 bits (494), Expect = 2e-47
 Identities = 98/194 (50%), Positives = 131/194 (67%), Gaps = 2/194 (1%)
 Frame = +2

Query: 173 MDARRRLSVLCSHLVPVDKELFSGISTS--SCGATDDGQCMKGSEEKDCVFCKIIRGELP 346
           M++R RLS++CSHL+P      S +S+S  S  + +D      + + DCVFC+I+RGE P
Sbjct: 1   MESRSRLSIICSHLLPGSPSPPSRLSSSITSSASINDAAGDTRNHQLDCVFCRIVRGESP 60

Query: 347 SLKVHEDDVCICILDSNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFLSSAIMKA 526
           + K++ED+ C+CILDS+PLS GHSL+IPK HFS L+ TPPSVVA+MCSK+P + +AIMKA
Sbjct: 61  AFKLYEDETCLCILDSSPLSPGHSLIIPKSHFSCLEATPPSVVAAMCSKVPSIGNAIMKA 120

Query: 527 TNCDSFXXXXXXXXXXXQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSI 706
              DSF           QVIFHTH+HIIPRK  D LW +E+  R+PL    E  +L   +
Sbjct: 121 NGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTTESLRRRPLNFDQEASQLVNRV 180

Query: 707 RKQLSMNTSHEDIK 748
           R+QLS + S ED K
Sbjct: 181 REQLS-SISPEDGK 193