BLASTX nr result

ID: Coptis21_contig00012709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012709
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277885.1| PREDICTED: uncharacterized protein LOC100250...    82   4e-14
ref|XP_002308033.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002529614.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|NP_191309.2| uncharacterized protein [Arabidopsis thaliana] ...    68   7e-10
emb|CAB66107.1| hypothetical protein [Arabidopsis thaliana]            68   7e-10

>ref|XP_002277885.1| PREDICTED: uncharacterized protein LOC100250289 [Vitis vinifera]
          Length = 112

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 37/57 (64%), Positives = 44/57 (77%), Gaps = 7/57 (12%)
 Frame = +2

Query: 2   GIIARICGGRHFGGSGEHDIEGWIERKCRSCIDAA-------PHPSEVSKPSTEASK 151
           GIIAR+CGGRHFGG+GE+DIEGW+ERKCRSCID         P P+E SKP+ E +K
Sbjct: 55  GIIARLCGGRHFGGNGENDIEGWVERKCRSCIDGGIPAAPPPPPPAEESKPAAEEAK 111


>ref|XP_002308033.1| predicted protein [Populus trichocarpa] gi|222854009|gb|EEE91556.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/54 (62%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = +2

Query: 2   GIIARICGGRHFGGSGEHDIEGWIERKCRSCID----AAPHPSEVSKPSTEASK 151
           GIIAR+CGGRHFGG+GEHDIEGW+E +CR+CID    AAP P   +KP+  A++
Sbjct: 51  GIIARLCGGRHFGGNGEHDIEGWVESRCRNCIDGGIPAAPPPPAEAKPAAAAAE 104


>ref|XP_002529614.1| conserved hypothetical protein [Ricinus communis]
           gi|223530899|gb|EEF32759.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 98

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
 Frame = +2

Query: 2   GIIARICGGRHFGGSGEHDIEGWIERKCRSCID-AAPHPSEVSKPSTEASK 151
           G+IAR+CGGRH    GEHDIEGW+ER+CRSCID   P P+E +KP+TE +K
Sbjct: 51  GVIARLCGGRH----GEHDIEGWVERRCRSCIDGGVPPPAEEAKPATEEAK 97


>ref|NP_191309.2| uncharacterized protein [Arabidopsis thaliana]
           gi|55978805|gb|AAV68864.1| hypothetical protein
           AT3G57500 [Arabidopsis thaliana]
           gi|60547821|gb|AAX23874.1| hypothetical protein
           At3g57500 [Arabidopsis thaliana]
           gi|332646142|gb|AEE79663.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 123

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/53 (56%), Positives = 35/53 (66%), Gaps = 7/53 (13%)
 Frame = +2

Query: 2   GIIARICGGRHFGGSGEHDIEGWIERKCRSCID-------AAPHPSEVSKPST 139
           G+ AR+CGGRH    G+HDIEGW+ERKCRSCID       AAP P     P+T
Sbjct: 56  GVFARLCGGRHLSHGGDHDIEGWVERKCRSCIDAGIPAVSAAPSPPPPPPPAT 108


>emb|CAB66107.1| hypothetical protein [Arabidopsis thaliana]
          Length = 139

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/53 (56%), Positives = 35/53 (66%), Gaps = 7/53 (13%)
 Frame = +2

Query: 2   GIIARICGGRHFGGSGEHDIEGWIERKCRSCID-------AAPHPSEVSKPST 139
           G+ AR+CGGRH    G+HDIEGW+ERKCRSCID       AAP P     P+T
Sbjct: 72  GVFARLCGGRHLSHGGDHDIEGWVERKCRSCIDAGIPAVSAAPSPPPPPPPAT 124


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