BLASTX nr result

ID: Coptis21_contig00012702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012702
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33028.1| UBA-like [Medicago truncatula]                          90   2e-16
ref|NP_001242734.1| uncharacterized protein LOC100777938 [Glycin...    89   4e-16
ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-conta...    88   6e-16
ref|XP_003624969.1| Ubiquitin-associated domain-containing prote...    87   1e-15
ref|XP_003554120.1| PREDICTED: uncharacterized protein LOC100805...    87   2e-15

>gb|ABD33028.1| UBA-like [Medicago truncatula]
          Length = 298

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 51/74 (68%), Positives = 57/74 (77%), Gaps = 3/74 (4%)
 Frame = +1

Query: 1   NIPSYTGHEVEAS---TGNYLSSAPLASTVKPSGNSIATLVSMGFDRNLARQALVQARNN 171
           N+PSY   ++EAS     NY   AP  S V+PS +SI TLVSMGFDRN ARQALVQARN+
Sbjct: 227 NVPSYPARQMEASFTSCRNY--PAPTHSAVEPSEDSIITLVSMGFDRNSARQALVQARND 284

Query: 172 VNVATNILLEAQSH 213
           VNVATNILLEAQSH
Sbjct: 285 VNVATNILLEAQSH 298


>ref|NP_001242734.1| uncharacterized protein LOC100777938 [Glycine max]
           gi|255636368|gb|ACU18523.1| unknown [Glycine max]
          Length = 293

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/71 (67%), Positives = 57/71 (80%)
 Frame = +1

Query: 1   NIPSYTGHEVEASTGNYLSSAPLASTVKPSGNSIATLVSMGFDRNLARQALVQARNNVNV 180
           N+PSY  H++E    NY   AP+ + V+P+ +SI TLVSMGFDRN ARQALVQARN+VNV
Sbjct: 228 NLPSYPTHQMER---NY--PAPMQAAVEPTEDSITTLVSMGFDRNSARQALVQARNDVNV 282

Query: 181 ATNILLEAQSH 213
           ATNILLEAQSH
Sbjct: 283 ATNILLEAQSH 293


>ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-containing protein 2 isoform
           1 [Vitis vinifera] gi|297741648|emb|CBI32780.3| unnamed
           protein product [Vitis vinifera]
          Length = 294

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 49/71 (69%), Positives = 56/71 (78%)
 Frame = +1

Query: 1   NIPSYTGHEVEASTGNYLSSAPLASTVKPSGNSIATLVSMGFDRNLARQALVQARNNVNV 180
           N PSY G +VE   GNY SS   A+T++P  ++IATLVSMGFDRN ARQALV ARN+VN 
Sbjct: 228 NAPSYAGRQVE---GNYPSSMG-AATIEPPEDAIATLVSMGFDRNSARQALVHARNDVNA 283

Query: 181 ATNILLEAQSH 213
           ATNILLEAQSH
Sbjct: 284 ATNILLEAQSH 294


>ref|XP_003624969.1| Ubiquitin-associated domain-containing protein [Medicago
           truncatula] gi|355499984|gb|AES81187.1|
           Ubiquitin-associated domain-containing protein [Medicago
           truncatula]
          Length = 292

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 49/71 (69%), Positives = 55/71 (77%)
 Frame = +1

Query: 1   NIPSYTGHEVEASTGNYLSSAPLASTVKPSGNSIATLVSMGFDRNLARQALVQARNNVNV 180
           N+PSY   ++E    NY   AP  S V+PS +SI TLVSMGFDRN ARQALVQARN+VNV
Sbjct: 227 NVPSYPARQMER---NY--PAPTHSAVEPSEDSIITLVSMGFDRNSARQALVQARNDVNV 281

Query: 181 ATNILLEAQSH 213
           ATNILLEAQSH
Sbjct: 282 ATNILLEAQSH 292


>ref|XP_003554120.1| PREDICTED: uncharacterized protein LOC100805217 isoform 1 [Glycine
           max]
          Length = 293

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/71 (66%), Positives = 56/71 (78%)
 Frame = +1

Query: 1   NIPSYTGHEVEASTGNYLSSAPLASTVKPSGNSIATLVSMGFDRNLARQALVQARNNVNV 180
           N+PSY   ++E    NY   AP+ + V+P+ +SI TLVSMGFDRN ARQALVQARN+VNV
Sbjct: 228 NLPSYPARQMER---NY--PAPMQAAVEPTEDSITTLVSMGFDRNSARQALVQARNDVNV 282

Query: 181 ATNILLEAQSH 213
           ATNILLEAQSH
Sbjct: 283 ATNILLEAQSH 293


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