BLASTX nr result

ID: Coptis21_contig00012699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012699
         (1179 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276929.1| PREDICTED: uncharacterized protein LOC100250...   394   e-107
ref|XP_002509884.1| prenyl-dependent CAAX protease, putative [Ri...   384   e-104
ref|XP_002304526.1| predicted protein [Populus trichocarpa] gi|2...   369   e-100
ref|XP_003533015.1| PREDICTED: uncharacterized protein LOC100814...   368   2e-99
ref|XP_002298001.1| predicted protein [Populus trichocarpa] gi|2...   363   3e-98

>ref|XP_002276929.1| PREDICTED: uncharacterized protein LOC100250094 [Vitis vinifera]
            gi|297742264|emb|CBI34413.3| unnamed protein product
            [Vitis vinifera]
          Length = 347

 Score =  394 bits (1013), Expect = e-107
 Identities = 202/352 (57%), Positives = 237/352 (67%)
 Frame = +3

Query: 27   MANPCCHCLTTPLPSLVLPQFSKFKAVKQNNRTFTSLSNFRTVRVTEADSTSLYKKRKVC 206
            M + C H L+   PSL  P  S+ +   +    +   S FR   ++E+ S     K K+ 
Sbjct: 1    MWSSCSHALSR-CPSLP-PTISRLRLPNRPGTLYPLSSGFR---ISESHSKFPKSKWKIS 55

Query: 207  CFRHEEFASRGPXXXXXXXXXXXXXXXXXXXXSSVVKRDFVTTFQEAAGVVFRIPGQPWT 386
            CFRHE+ +S  P                     S V++D+ ++F+EAA V+ R+ G+PW 
Sbjct: 56   CFRHEDSSSETPKSESIDDILSGELVKPEFNKPSTVQKDWASSFREAADVILRVIGKPWV 115

Query: 387  VPWTAQTIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLLTDVAEGLA 566
            VPWT++TI QV+LLWI SFWFVGSW++PF  H  GFSK+SLTYRGQALYSLLTDVAEGLA
Sbjct: 116  VPWTSETILQVMLLWIVSFWFVGSWMIPFTAHVVGFSKESLTYRGQALYSLLTDVAEGLA 175

Query: 567  GIAILHRCLYRFRPLPSDWFQFSLRGKWQLDVGLGCLMFPLVNRLSQVNLNLVPHLXXXX 746
            GIAILHRCL RF PLPSDWF+FSLRG W  DV +GCLMFPLVNRLSQ NL+L+P L    
Sbjct: 176  GIAILHRCLSRFSPLPSDWFRFSLRGNWLADVAIGCLMFPLVNRLSQFNLDLLPLLPSTP 235

Query: 747  XXXXXXXXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPVWCSILVSSV 926
                       ARDP              P+WEEIVFRGFLLPSLTKYMPVWCSILVSSV
Sbjct: 236  VTLSSVEQSIMARDPVAMGLYALVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCSILVSSV 295

Query: 927  VFALAHFNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLMK 1082
             FALAHFN QRMLPLIFLG+VMG +F RSRNL   MLLHSLWN FVFL+LMK
Sbjct: 296  AFALAHFNVQRMLPLIFLGVVMGVIFARSRNLLPSMLLHSLWNGFVFLDLMK 347


>ref|XP_002509884.1| prenyl-dependent CAAX protease, putative [Ricinus communis]
            gi|223549783|gb|EEF51271.1| prenyl-dependent CAAX
            protease, putative [Ricinus communis]
          Length = 355

 Score =  384 bits (987), Expect = e-104
 Identities = 195/356 (54%), Positives = 239/356 (67%), Gaps = 4/356 (1%)
 Frame = +3

Query: 27   MANPCCHCLTTPLPSLVLPQFSKFKAVKQNNRTFTSLSNFRTVRVTEADSTSLYKKRKVC 206
            +++ C H L+   P ++LP  S+ + + +       L   R VR+ E+ S     K K+ 
Sbjct: 2    LSSSCSHSLSQRSP-ILLPSISRVRVINRPGILSPPLVT-RNVRIFESSSKLSKNKWKIS 59

Query: 207  CFRHEEFASRGPXXXXXXXXXXXXXXXXXXXX--SSVVKRDFVTTFQEAAGVVFRIPGQP 380
            CF+HE+F+   P                      S+ VKRD++TT QEAAGVVF+  G  
Sbjct: 60   CFKHEDFSPVNPKSDDVEHCLPEKLAKQPELDNNSTDVKRDWITTLQEAAGVVFQAIGSQ 119

Query: 381  WTVPWTAQTIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLLTDVAEG 560
            WTVPWTA+TI QV+LLW+ SFWF+GSW++PF  H AGF+K+SLT+RGQAL+SL+TDV EG
Sbjct: 120  WTVPWTAETIIQVMLLWVVSFWFIGSWVIPFAAHIAGFNKESLTFRGQALFSLVTDVTEG 179

Query: 561  LAGIAILHRCLYRFRPLPSDWFQFSLRGKWQ--LDVGLGCLMFPLVNRLSQVNLNLVPHL 734
            LAGIAILHRCL RF PLPSDWF+FSL+G W   LDV LGC MFPL+NRLSQVNL+L+P L
Sbjct: 180  LAGIAILHRCLSRFCPLPSDWFRFSLKGNWAWLLDVALGCFMFPLINRLSQVNLSLLPIL 239

Query: 735  XXXXXXXXXXXXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPVWCSIL 914
                           ARDP              P+WEEI+FRGFLLPSLT+YMPVWC+IL
Sbjct: 240  PSAPVTLSSVEQSIAARDPVAMALYAIVVSVCAPVWEEILFRGFLLPSLTRYMPVWCAIL 299

Query: 915  VSSVVFALAHFNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLMK 1082
            VSS+ FALAHFN QRMLPLI LG VMG +F RSRNL   MLLHSLWN FVFL+LM+
Sbjct: 300  VSSIAFALAHFNVQRMLPLILLGAVMGVIFARSRNLMPSMLLHSLWNGFVFLDLMR 355


>ref|XP_002304526.1| predicted protein [Populus trichocarpa] gi|222841958|gb|EEE79505.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  369 bits (948), Expect = e-100
 Identities = 187/337 (55%), Positives = 224/337 (66%)
 Frame = +3

Query: 72   LVLPQFSKFKAVKQNNRTFTSLSNFRTVRVTEADSTSLYKKRKVCCFRHEEFASRGPXXX 251
            ++ P   K +    N    +SL   R  R+ E++S     K +V CFR+EE +   P   
Sbjct: 9    ILTPSIPKLRVF--NRPRNSSLFAARNNRIFESNSKLPKHKWRVSCFRNEEISQVNPGSD 66

Query: 252  XXXXXXXXXXXXXXXXXSSVVKRDFVTTFQEAAGVVFRIPGQPWTVPWTAQTIFQVILLW 431
                             S+ VKRD++++ +EAA VV R  G  WTVPWTA+TI QV+LLW
Sbjct: 67   SVERYVPEELVKPELDNSTNVKRDWISSLREAANVVLRAFGSSWTVPWTAETIVQVMLLW 126

Query: 432  IASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLLTDVAEGLAGIAILHRCLYRFRPL 611
            + SFWF+GSW++PF  H AGF+K+SLT+RGQAL+SL+TDV EGLAGIAILH CL RF PL
Sbjct: 127  VVSFWFIGSWLIPFAAHIAGFNKESLTFRGQALFSLVTDVTEGLAGIAILHCCLSRFHPL 186

Query: 612  PSDWFQFSLRGKWQLDVGLGCLMFPLVNRLSQVNLNLVPHLXXXXXXXXXXXXXXXARDP 791
             SDWF+F L+G W  DV LGCLMFPLVNRLSQ NL+L+P L               ARDP
Sbjct: 187  SSDWFRFRLKGNWLFDVALGCLMFPLVNRLSQFNLSLLPILPSTPVTLSSVEQSIAARDP 246

Query: 792  XXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPVWCSILVSSVVFALAHFNAQRMLPL 971
                          P+WEEIVFRGFLLPSLT+YMPVWC+ILVSSV FAL HFN QRMLPL
Sbjct: 247  VAMVLYAIVVSVCAPVWEEIVFRGFLLPSLTRYMPVWCAILVSSVAFALVHFNVQRMLPL 306

Query: 972  IFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLMK 1082
            IFLG+VMG +F RSRNL   MLLHSLWN FVFL+LMK
Sbjct: 307  IFLGVVMGVIFARSRNLLPSMLLHSLWNGFVFLDLMK 343


>ref|XP_003533015.1| PREDICTED: uncharacterized protein LOC100814248 [Glycine max]
          Length = 341

 Score =  368 bits (944), Expect = 2e-99
 Identities = 179/308 (58%), Positives = 212/308 (68%)
 Frame = +3

Query: 159  VTEADSTSLYKKRKVCCFRHEEFASRGPXXXXXXXXXXXXXXXXXXXXSSVVKRDFVTTF 338
            + E+ + S   +  + CFRH+  +   P                    SSV KRD+ +T 
Sbjct: 34   ILESHAKSPKNRLSILCFRHDHHSPETPQPEVIEHYLHEELVQSEFNDSSVTKRDWKSTI 93

Query: 339  QEAAGVVFRIPGQPWTVPWTAQTIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYR 518
            Q+AA  VF++ G  W VPW A TI QV+LLW  +FWF+GSW++PF  H  GFSK+SLT+R
Sbjct: 94   QKAANEVFKVIGYRWVVPWNAMTILQVMLLWTTAFWFIGSWMIPFAAHITGFSKESLTFR 153

Query: 519  GQALYSLLTDVAEGLAGIAILHRCLYRFRPLPSDWFQFSLRGKWQLDVGLGCLMFPLVNR 698
            GQAL+SL+TDV EGLAG+AIL RCL RFRPLP DWF+FSL+G WQLDV +GCLMFPLVNR
Sbjct: 154  GQALFSLVTDVTEGLAGVAILLRCLSRFRPLPPDWFEFSLKGNWQLDVIMGCLMFPLVNR 213

Query: 699  LSQVNLNLVPHLXXXXXXXXXXXXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPS 878
            LSQ NL+L+P L               ARDP              P+WEEIVFRGFLLPS
Sbjct: 214  LSQFNLDLLPLLPSTPVTLSSVEQSIRARDPVAMLLYATVVSVCAPVWEEIVFRGFLLPS 273

Query: 879  LTKYMPVWCSILVSSVVFALAHFNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNA 1058
            LTKYMPVWC+ILVSS+ FALAHFN QRMLPLIFLGMVMG ++TRSRNL   MLLHSLWN 
Sbjct: 274  LTKYMPVWCAILVSSIAFALAHFNIQRMLPLIFLGMVMGVIYTRSRNLLPSMLLHSLWNG 333

Query: 1059 FVFLNLMK 1082
            FVFL+LMK
Sbjct: 334  FVFLDLMK 341


>ref|XP_002298001.1| predicted protein [Populus trichocarpa] gi|222845259|gb|EEE82806.1|
            predicted protein [Populus trichocarpa]
          Length = 300

 Score =  363 bits (933), Expect = 3e-98
 Identities = 178/300 (59%), Positives = 212/300 (70%)
 Frame = +3

Query: 183  LYKKRKVCCFRHEEFASRGPXXXXXXXXXXXXXXXXXXXXSSVVKRDFVTTFQEAAGVVF 362
            + +K ++  FR+EE +   P                    S+ V+ D++++ +EAA VV 
Sbjct: 1    MLQKWRISFFRNEEISQVNPGSDSVERYVPEELVKPELDNSTNVEGDWISSLREAAHVVL 60

Query: 363  RIPGQPWTVPWTAQTIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLL 542
            R  G  WTVPWTA+TI QV+LLW+ SFWF+GSW++PF  H AGF+K+SLT+RGQAL+SL+
Sbjct: 61   RAFGSRWTVPWTAETIVQVMLLWVVSFWFIGSWVIPFAAHIAGFNKESLTFRGQALFSLV 120

Query: 543  TDVAEGLAGIAILHRCLYRFRPLPSDWFQFSLRGKWQLDVGLGCLMFPLVNRLSQVNLNL 722
            TDV EGLAGIAILHRCL RFRPL SDWF+F L+G W  DV LGCLMFPLVNRLSQ NL+L
Sbjct: 121  TDVTEGLAGIAILHRCLSRFRPLSSDWFRFRLKGNWVFDVALGCLMFPLVNRLSQFNLSL 180

Query: 723  VPHLXXXXXXXXXXXXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPVW 902
            +P L               ARDP              P+WEEIVFRGFLLPSLT+YMPVW
Sbjct: 181  LPILPSTPVTLSSVEQSIAARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTRYMPVW 240

Query: 903  CSILVSSVVFALAHFNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLMK 1082
            C+ILVSSV FALAHFN QRMLPLIFLG+VMG +FTRSRNL   MLLHSLWN FVFL+LMK
Sbjct: 241  CAILVSSVAFALAHFNVQRMLPLIFLGVVMGVIFTRSRNLLPSMLLHSLWNGFVFLDLMK 300


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