BLASTX nr result

ID: Coptis21_contig00012693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012693
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284504.2| PREDICTED: two-component response regulator ...   192   6e-47
emb|CBI19004.3| unnamed protein product [Vitis vinifera]              191   1e-46
ref|XP_002302230.1| type-a response regulator [Populus trichocar...   176   1e-46
emb|CBX43985.1| putative A-type response regulator 3 [Populus x ...   176   1e-46
ref|XP_003526642.1| PREDICTED: two-component response regulator ...   177   4e-46

>ref|XP_002284504.2| PREDICTED: two-component response regulator ARR9-like [Vitis
           vinifera]
          Length = 240

 Score =  192 bits (488), Expect = 6e-47
 Identities = 111/180 (61%), Positives = 127/180 (70%), Gaps = 24/180 (13%)
 Frame = +1

Query: 130 KALEKLLTVSSYHVTCVDSADKALEYLGLLD----------------DLKCSSSTSSLMP 261
           K LEKLLTVSSYHVTCV+S DKALEYLGLLD                    SSS+SS   
Sbjct: 41  KLLEKLLTVSSYHVTCVESGDKALEYLGLLDGRDNDTTSSSSSSSSSSSSSSSSSSSSSA 100

Query: 262 KPQLQE-TKVNLIMTDYSMPGMTGYDLLQRVKKSSWKDVPVVVMSSENVPSRMNMCLEGG 438
           KP  QE  KVNLIMTDY MPGM+GYDLL+RVK SSWKDVPVVVMSSENVPSR+NMCLEGG
Sbjct: 101 KPSQQEGLKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSRINMCLEGG 160

Query: 439 AKEFLLKPVQLSDLRKLRPHLLESLE-------SSCNDGGKKMMVAKTEVTTMSQTESAN 597
           A++FLLKPVQLSDL KL+PHLL+SL        +S N+  +   + K   T+ S ++S N
Sbjct: 161 AEDFLLKPVQLSDLEKLQPHLLKSLSQYPCENINSSNEDDEN--INKNNSTSCSSSKSNN 218


>emb|CBI19004.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  191 bits (486), Expect = 1e-46
 Identities = 111/182 (60%), Positives = 127/182 (69%), Gaps = 26/182 (14%)
 Frame = +1

Query: 130 KALEKLLTVSSYHVTCVDSADKALEYLGLLD----------------DLKCSSSTSSLMP 261
           K LEKLLTVSSYHVTCV+S DKALEYLGLLD                    SSS+SS   
Sbjct: 31  KLLEKLLTVSSYHVTCVESGDKALEYLGLLDGRDNDTTSSSSSSSSSSSSSSSSSSSSSA 90

Query: 262 KPQLQET---KVNLIMTDYSMPGMTGYDLLQRVKKSSWKDVPVVVMSSENVPSRMNMCLE 432
           KP  QE    KVNLIMTDY MPGM+GYDLL+RVK SSWKDVPVVVMSSENVPSR+NMCLE
Sbjct: 91  KPSQQEMQGLKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSRINMCLE 150

Query: 433 GGAKEFLLKPVQLSDLRKLRPHLLESLE-------SSCNDGGKKMMVAKTEVTTMSQTES 591
           GGA++FLLKPVQLSDL KL+PHLL+SL        +S N+  +   + K   T+ S ++S
Sbjct: 151 GGAEDFLLKPVQLSDLEKLQPHLLKSLSQYPCENINSSNEDDEN--INKNNSTSCSSSKS 208

Query: 592 AN 597
            N
Sbjct: 209 NN 210


>ref|XP_002302230.1| type-a response regulator [Populus trichocarpa]
           gi|222843956|gb|EEE81503.1| type-a response regulator
           [Populus trichocarpa]
          Length = 243

 Score =  176 bits (446), Expect(2) = 1e-46
 Identities = 96/161 (59%), Positives = 118/161 (73%), Gaps = 4/161 (2%)
 Frame = +1

Query: 130 KALEKLLTVSSYHVTCVDSADKALEYLGLLDDLKC--SSSTSSLMPKPQLQETKVNLIMT 303
           K LE+LL VSSY VT VDS DKALEYLGLLD +    ++S+SS    PQ +  KVNLIMT
Sbjct: 59  KLLERLLKVSSYQVTFVDSGDKALEYLGLLDSIDNVNATSSSSSSQSPQQEGMKVNLIMT 118

Query: 304 DYSMPGMTGYDLLQRVKKSSWKDVPVVVMSSENVPSRMNMCLEGGAKEFLLKPVQLSDLR 483
           DY MPGM+GYDLL+RVK S WKDVPVVVMSSEN+PSR+ MCLE GA+EFLLKP+QLSD+ 
Sbjct: 119 DYCMPGMSGYDLLKRVKGSYWKDVPVVVMSSENIPSRIRMCLEEGAEEFLLKPLQLSDVE 178

Query: 484 KLRPHLLESLE--SSCNDGGKKMMVAKTEVTTMSQTESANL 600
           KL+ HLL+SL+  SS            + +T  +++ S N+
Sbjct: 179 KLQTHLLKSLDKYSSKRIDDNSFNTDSSNITVSNKSNSNNI 219



 Score = 36.6 bits (83), Expect(2) = 1e-46
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +2

Query: 56  EADYEGTKYQQNFHVLAVDDSVTDRKL 136
           + D EG + +++FHVLAVDDS  DRKL
Sbjct: 34  QRDQEGEEEEKHFHVLAVDDSFIDRKL 60


>emb|CBX43985.1| putative A-type response regulator 3 [Populus x canadensis]
          Length = 242

 Score =  176 bits (446), Expect(2) = 1e-46
 Identities = 96/161 (59%), Positives = 118/161 (73%), Gaps = 4/161 (2%)
 Frame = +1

Query: 130 KALEKLLTVSSYHVTCVDSADKALEYLGLLDDLKC--SSSTSSLMPKPQLQETKVNLIMT 303
           K LE+LL VSSY VT VDS DKALEYLGLLD +    ++S+SS    PQ +  KVNLIMT
Sbjct: 58  KLLERLLKVSSYQVTFVDSGDKALEYLGLLDSIDNVNATSSSSSSQSPQQEGMKVNLIMT 117

Query: 304 DYSMPGMTGYDLLQRVKKSSWKDVPVVVMSSENVPSRMNMCLEGGAKEFLLKPVQLSDLR 483
           DY MPGM+GYDLL+RVK S WKDVPVVVMSSEN+PSR+ MCLE GA+EFLLKP+QLSD+ 
Sbjct: 118 DYCMPGMSGYDLLKRVKGSYWKDVPVVVMSSENIPSRIRMCLEEGAEEFLLKPLQLSDVE 177

Query: 484 KLRPHLLESLE--SSCNDGGKKMMVAKTEVTTMSQTESANL 600
           KL+ HLL+SL+  SS            + +T  +++ S N+
Sbjct: 178 KLQTHLLKSLDKYSSKRIDDNSFNTDSSNITVSNKSNSNNI 218



 Score = 36.6 bits (83), Expect(2) = 1e-46
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +2

Query: 56  EADYEGTKYQQNFHVLAVDDSVTDRKL 136
           + D EG + +++FHVLAVDDS  DRKL
Sbjct: 33  QRDQEGEEEEKHFHVLAVDDSFIDRKL 59


>ref|XP_003526642.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
          Length = 232

 Score =  177 bits (450), Expect(2) = 4e-46
 Identities = 96/139 (69%), Positives = 115/139 (82%), Gaps = 7/139 (5%)
 Frame = +1

Query: 130 KALEKLLTVSSYHVTCVDSADKALEYLGLLDDLKCSSSTS----SLMPKPQ-LQET--KV 288
           K LE+LL  SS  VTCVDS DKAL+YLGL+D+L  +SST+    S  P PQ LQ+   KV
Sbjct: 36  KLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTTLESESSHPPPQPLQQEGIKV 95

Query: 289 NLIMTDYSMPGMTGYDLLQRVKKSSWKDVPVVVMSSENVPSRMNMCLEGGAKEFLLKPVQ 468
           NLIMTDY MPGM+GYDLL+RVK SSWKDVPVV+MSSENVPSR++MCLE GA+EFLLKP+Q
Sbjct: 96  NLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEEGAQEFLLKPLQ 155

Query: 469 LSDLRKLRPHLLESLESSC 525
           LSDL KL+P+ L+SL++SC
Sbjct: 156 LSDLDKLQPYFLKSLDNSC 174



 Score = 33.5 bits (75), Expect(2) = 4e-46
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +2

Query: 86  QNFHVLAVDDSVTDRKL 136
           Q+FHVLAVDDSV DRKL
Sbjct: 21  QHFHVLAVDDSVIDRKL 37


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