BLASTX nr result

ID: Coptis21_contig00012690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012690
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524529.1| PREDICTED: uncharacterized protein LOC100820...    78   1e-12
gb|ACU19699.1| unknown [Glycine max]                                   77   3e-12
ref|XP_002316603.1| predicted protein [Populus trichocarpa] gi|1...    74   3e-11
ref|XP_002524438.1| conserved hypothetical protein [Ricinus comm...    72   6e-11
ref|XP_002439373.1| hypothetical protein SORBIDRAFT_09g005320 [S...    64   2e-08

>ref|XP_003524529.1| PREDICTED: uncharacterized protein LOC100820016 [Glycine max]
          Length = 77

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 42/78 (53%), Positives = 47/78 (60%)
 Frame = -3

Query: 519 MASPQSDISNGEGVVMRPKRSPPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAVLAG 340
           MA+P SD SN E VV R    PP KF               + R  PV+RDRLFTAVLAG
Sbjct: 1   MATP-SDPSNQEAVVRRRNNGPPIKFLLPLIYAPVLPLIRLSLRHKPVLRDRLFTAVLAG 59

Query: 339 GLFHGFYLITDLYDVESK 286
              HGFYL+TDLYD+ESK
Sbjct: 60  AFAHGFYLVTDLYDIESK 77


>gb|ACU19699.1| unknown [Glycine max]
          Length = 77

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 41/78 (52%), Positives = 47/78 (60%)
 Frame = -3

Query: 519 MASPQSDISNGEGVVMRPKRSPPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAVLAG 340
           MA+P SD SN E VV R    PP KF               + R  PV+RDRLFTAVLAG
Sbjct: 1   MATP-SDPSNQEAVVRRRNNGPPIKFLLPLIYAPVLPLIRLSLRHKPVLRDRLFTAVLAG 59

Query: 339 GLFHGFYLITDLYDVESK 286
              HGFYL+TDLYD+ES+
Sbjct: 60  AFAHGFYLVTDLYDIESE 77


>ref|XP_002316603.1| predicted protein [Populus trichocarpa] gi|118483510|gb|ABK93653.1|
           unknown [Populus trichocarpa]
           gi|222859668|gb|EEE97215.1| predicted protein [Populus
           trichocarpa]
          Length = 79

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 41/80 (51%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
 Frame = -3

Query: 519 MASPQSDISNGEGV--VMRPKRSPPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAVL 346
           MASP SD +N E    + R K  PP KF                 R+NPVVRDRLFTAVL
Sbjct: 1   MASP-SDPTNPEAAAAIRRKKNGPPIKFLVPLVYAPVLPLIRLTLRKNPVVRDRLFTAVL 59

Query: 345 AGGLFHGFYLITDLYDVESK 286
            G   HGFYL+TD+YD ESK
Sbjct: 60  VGAFAHGFYLVTDIYDSESK 79


>ref|XP_002524438.1| conserved hypothetical protein [Ricinus communis]
           gi|223536226|gb|EEF37878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 80

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 41/78 (52%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = -3

Query: 516 ASPQSDISNGEGVVMRPKRS-PPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAVLAG 340
           +S  SD S    V +R + + PP KF               A RRNPVVRDRLFTAVLAG
Sbjct: 3   SSSSSDPSVRRDVAVRKQNNGPPVKFLVPLVYAPILPLIRIALRRNPVVRDRLFTAVLAG 62

Query: 339 GLFHGFYLITDLYDVESK 286
              HGFYL+TD+YDVESK
Sbjct: 63  AFAHGFYLVTDIYDVESK 80


>ref|XP_002439373.1| hypothetical protein SORBIDRAFT_09g005320 [Sorghum bicolor]
           gi|241944658|gb|EES17803.1| hypothetical protein
           SORBIDRAFT_09g005320 [Sorghum bicolor]
          Length = 81

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/81 (45%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
 Frame = -3

Query: 519 MASPQSDISNGEGVVMRP---KRSPPFKFXXXXXXXXXXXXXXXAFRRNPVVRDRLFTAV 349
           MAS  S  S     V RP   +R PP+                   R NPVVRDRLF  V
Sbjct: 1   MASSSSSSSRDPAAVRRPPQRERKPPYMLLLPLVYAPVLPLIRIGLRHNPVVRDRLFYGV 60

Query: 348 LAGGLFHGFYLITDLYDVESK 286
           LAG   HG YLI++LYDVESK
Sbjct: 61  LAGAFAHGAYLISELYDVESK 81


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