BLASTX nr result

ID: Coptis21_contig00012684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00012684
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-conta...    98   6e-19
ref|XP_003624969.1| Ubiquitin-associated domain-containing prote...    95   5e-18
ref|XP_003554120.1| PREDICTED: uncharacterized protein LOC100805...    95   7e-18
gb|ACJ85071.1| unknown [Medicago truncatula]                           93   2e-17
ref|NP_001242734.1| uncharacterized protein LOC100777938 [Glycin...    92   4e-17

>ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-containing protein 2 isoform
           1 [Vitis vinifera] gi|297741648|emb|CBI32780.3| unnamed
           protein product [Vitis vinifera]
          Length = 294

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/66 (75%), Positives = 57/66 (86%)
 Frame = -3

Query: 480 PSYTGREVEGNYPSAAPLASTLEPSGNSMARLVSMGFDRNSARQALVQARNDVNVATNIL 301
           PSY GR+VEGNYPS+   A+T+EP  +++A LVSMGFDRNSARQALV ARNDVN ATNIL
Sbjct: 230 PSYAGRQVEGNYPSSMG-AATIEPPEDAIATLVSMGFDRNSARQALVHARNDVNAATNIL 288

Query: 300 LEAQSH 283
           LEAQSH
Sbjct: 289 LEAQSH 294


>ref|XP_003624969.1| Ubiquitin-associated domain-containing protein [Medicago
           truncatula] gi|355499984|gb|AES81187.1|
           Ubiquitin-associated domain-containing protein [Medicago
           truncatula]
          Length = 292

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/66 (75%), Positives = 55/66 (83%)
 Frame = -3

Query: 480 PSYTGREVEGNYPSAAPLASTLEPSGNSMARLVSMGFDRNSARQALVQARNDVNVATNIL 301
           PSY  R++E NYP  AP  S +EPS +S+  LVSMGFDRNSARQALVQARNDVNVATNIL
Sbjct: 229 PSYPARQMERNYP--APTHSAVEPSEDSIITLVSMGFDRNSARQALVQARNDVNVATNIL 286

Query: 300 LEAQSH 283
           LEAQSH
Sbjct: 287 LEAQSH 292


>ref|XP_003554120.1| PREDICTED: uncharacterized protein LOC100805217 isoform 1 [Glycine
           max]
          Length = 293

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/66 (72%), Positives = 56/66 (84%)
 Frame = -3

Query: 480 PSYTGREVEGNYPSAAPLASTLEPSGNSMARLVSMGFDRNSARQALVQARNDVNVATNIL 301
           PSY  R++E NYP  AP+ + +EP+ +S+  LVSMGFDRNSARQALVQARNDVNVATNIL
Sbjct: 230 PSYPARQMERNYP--APMQAAVEPTEDSITTLVSMGFDRNSARQALVQARNDVNVATNIL 287

Query: 300 LEAQSH 283
           LEAQSH
Sbjct: 288 LEAQSH 293


>gb|ACJ85071.1| unknown [Medicago truncatula]
          Length = 292

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/66 (74%), Positives = 54/66 (81%)
 Frame = -3

Query: 480 PSYTGREVEGNYPSAAPLASTLEPSGNSMARLVSMGFDRNSARQALVQARNDVNVATNIL 301
           PSY  R++E NYP  AP  S +EPS +S+  LVSMGFDRNSARQALVQARNDVNVATNIL
Sbjct: 229 PSYPARQMERNYP--APTHSAVEPSEDSIITLVSMGFDRNSARQALVQARNDVNVATNIL 286

Query: 300 LEAQSH 283
           LEAQ H
Sbjct: 287 LEAQPH 292


>ref|NP_001242734.1| uncharacterized protein LOC100777938 [Glycine max]
           gi|255636368|gb|ACU18523.1| unknown [Glycine max]
          Length = 293

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = -3

Query: 480 PSYTGREVEGNYPSAAPLASTLEPSGNSMARLVSMGFDRNSARQALVQARNDVNVATNIL 301
           PSY   ++E NYP  AP+ + +EP+ +S+  LVSMGFDRNSARQALVQARNDVNVATNIL
Sbjct: 230 PSYPTHQMERNYP--APMQAAVEPTEDSITTLVSMGFDRNSARQALVQARNDVNVATNIL 287

Query: 300 LEAQSH 283
           LEAQSH
Sbjct: 288 LEAQSH 293


Top